RNA–Protein interactions for RNA: ENST00000507689.1

COL1A1-211, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 549 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-211ENST00000507689 GAGE12IP0CL82 117 aa11.08□□□□□ -0.64
COL1A1-211ENST00000507689 DAZ2Q13117 558 aaKnown RBP11.08□□□□□ -0.64
COL1A1-211ENST00000507689 FAM159AQ6UWV7 190 aa11.08□□□□□ -0.64
COL1A1-211ENST00000507689 ATG101Q9BSB4 218 aa11.08□□□□□ -0.64
COL1A1-211ENST00000507689 IFNA7P01567 189 aa11.07□□□□□ -0.64
COL1A1-211ENST00000507689 ZNF415Q09FC8 603 aa11.07□□□□□ -0.64
COL1A1-211ENST00000507689 OR5I1Q13606 314 aa11.07□□□□□ -0.64
COL1A1-211ENST00000507689 ZFP69Q49AA0 526 aa11.07□□□□□ -0.64
COL1A1-211ENST00000507689 KCNRGQ8N5I3 272 aa11.07□□□□□ -0.64
COL1A1-211ENST00000507689 POM121L12Q8N7R1 296 aa11.07□□□□□ -0.64
COL1A1-211ENST00000507689 NKX6-2Q9C056 277 aaPredicted RBP11.07□□□□□ -0.64
COL1A1-211ENST00000507689 TREM1Q9NP99 234 aa11.07□□□□□ -0.64
COL1A1-211ENST00000507689 GSN-AS1Q9NRJ2 163 aa11.07□□□□□ -0.64
COL1A1-211ENST00000507689 TRGV1A0A0A0MS02 117 aa11.06□□□□□ -0.64
COL1A1-211ENST00000507689 FBLL1A6NHQ2 334 aaKnown RBP11.06□□□□□ -0.64
COL1A1-211ENST00000507689 NUDT3O95989 172 aa11.06□□□□□ -0.64
COL1A1-211ENST00000507689 PPT1P50897 306 aa11.06□□□□□ -0.64
COL1A1-211ENST00000507689 SUMO1P63165 101 aaKnown RBP11.06□□□□□ -0.64
COL1A1-211ENST00000507689 IBA57Q5T440 356 aaKnown RBP11.06□□□□□ -0.64
COL1A1-211ENST00000507689 ZNF471Q9BX82 626 aaPredicted RBP11.06□□□□□ -0.64
COL1A1-211ENST00000507689 NAGKQ9UJ70 344 aa11.06□□□□□ -0.64
COL1A1-211ENST00000507689 TRGV11A0A075B6L2 103 aa11.05□□□□□ -0.64
COL1A1-211ENST00000507689 TRAV21A0A0B4J279 112 aa11.05□□□□□ -0.64
COL1A1-211ENST00000507689 A0A1W2PRE2 83 aa11.05□□□□□ -0.64
COL1A1-211ENST00000507689 G3V3Q6 166 aa11.05□□□□□ -0.64
COL1A1-211ENST00000507689 TCRAP04437 139 aa11.05□□□□□ -0.64
COL1A1-211ENST00000507689 GNG5P63218 68 aa11.05□□□□□ -0.64
COL1A1-211ENST00000507689 MUC21Q5SSG8 566 aa11.05□□□□□ -0.64
COL1A1-211ENST00000507689 DYNC2H1Q8NCM8 4307 aaKnown RBP11.04□□□□□ -0.64
COL1A1-211ENST00000507689 MAP1LC3B2A6NCE7 125 aa11.04□□□□□ -0.64
COL1A1-211ENST00000507689 UMAD1C9J7I0 102 aa11.04□□□□□ -0.64
COL1A1-211ENST00000507689 BCL2L11O43521 198 aa11.04□□□□□ -0.64
COL1A1-211ENST00000507689 TCL1AP56279 114 aa11.04□□□□□ -0.64
COL1A1-211ENST00000507689 PRR9Q5T870 116 aa11.04□□□□□ -0.64
COL1A1-211ENST00000507689 Q6AWC8 147 aa11.04□□□□□ -0.64
COL1A1-211ENST00000507689 CYB561D1Q8N8Q1 229 aa11.04□□□□□ -0.64
COL1A1-211ENST00000507689 SUN5Q8TC36 379 aa11.04□□□□□ -0.64
COL1A1-211ENST00000507689 MAP1LC3BQ9GZQ8 125 aa11.04□□□□□ -0.64
COL1A1-211ENST00000507689 EPDR1Q9UM22 224 aa11.04□□□□□ -0.64
COL1A1-211ENST00000507689 LYSTQ99698 3801 aa11.03□□□□□ -0.64
COL1A1-211ENST00000507689 F6UZH7 168 aa11.03□□□□□ -0.64
COL1A1-211ENST00000507689 UBE2G2P60604 165 aa11.03□□□□□ -0.64
COL1A1-211ENST00000507689 RNF212Q495C1 297 aa11.03□□□□□ -0.64
COL1A1-211ENST00000507689 SAPCD1Q5SSQ6 148 aa11.03□□□□□ -0.64
COL1A1-211ENST00000507689 Q6ZTI0 123 aa11.03□□□□□ -0.64
COL1A1-211ENST00000507689 SSX7Q7RTT5 188 aa11.03□□□□□ -0.64
COL1A1-211ENST00000507689 KCNS1Q96KK3 526 aa11.03□□□□□ -0.64
COL1A1-211ENST00000507689 CYTL1Q9NRR1 136 aa11.03□□□□□ -0.64
COL1A1-211ENST00000507689 TRAV8-1A0A0A6YYK1 113 aa11.02□□□□□ -0.65
COL1A1-211ENST00000507689 SEC11BP0C7V7 166 aa11.02□□□□□ -0.65
COL1A1-211ENST00000507689 TPT1P13693 172 aaKnown RBP11.02□□□□□ -0.65
COL1A1-211ENST00000507689 FGF8P55075 233 aaPredicted RBP11.02□□□□□ -0.65
COL1A1-211ENST00000507689 CCL18P55774 89 aa11.02□□□□□ -0.65
COL1A1-211ENST00000507689 FLI1Q01543 452 aaPredicted RBP11.02□□□□□ -0.65
COL1A1-211ENST00000507689 TMEM183BQ1AE95 376 aa11.02□□□□□ -0.65
COL1A1-211ENST00000507689 LGALS9BQ3B8N2 356 aa11.02□□□□□ -0.65
COL1A1-211ENST00000507689 EIF5AL1Q6IS14 154 aaKnown RBP11.02□□□□□ -0.65
COL1A1-211ENST00000507689 PRNTQ86SH4 94 aa11.02□□□□□ -0.65
COL1A1-211ENST00000507689 TMEM183AQ8IXX5 376 aa11.02□□□□□ -0.65
COL1A1-211ENST00000507689 LINC00612Q8N6U2 182 aa11.02□□□□□ -0.65
COL1A1-211ENST00000507689 C11orf72Q8NBR9 251 aa11.02□□□□□ -0.65
COL1A1-211ENST00000507689 SDF2L1Q9HCN8 221 aa11.02□□□□□ -0.65
COL1A1-211ENST00000507689 PSG8Q9UQ74 426 aa11.02□□□□□ -0.65
COL1A1-211ENST00000507689 KLF12Q9Y4X4 402 aa11.02□□□□□ -0.65
COL1A1-211ENST00000507689 FAM3BP58499 235 aaPredicted RBP11.01□□□□□ -0.65
COL1A1-211ENST00000507689 SMUG1Q53HV7 270 aa11.01□□□□□ -0.65
COL1A1-211ENST00000507689 TMEM75Q8N9X5 138 aa11.01□□□□□ -0.65
COL1A1-211ENST00000507689 SGK494Q96LW2 274 aa11.01□□□□□ -0.65
COL1A1-211ENST00000507689 SPXQ9BT56 116 aa11.01□□□□□ -0.65
COL1A1-211ENST00000507689 TMPRSS5Q9H3S3 457 aa11.01□□□□□ -0.65
COL1A1-211ENST00000507689 TP53TG3Q9ULZ0 132 aa11.01□□□□□ -0.65
COL1A1-211ENST00000507689 RYR3Q15413 4870 aa11.01□□□□□ -0.65
COL1A1-211ENST00000507689 ALMS1Q8TCU4 4167 aa11□□□□□ -0.65
COL1A1-211ENST00000507689 TRAV26-1A0A087WT03 109 aa11□□□□□ -0.65
COL1A1-211ENST00000507689 GGTLC3B5MD39 225 aa11□□□□□ -0.65
COL1A1-211ENST00000507689 SPINK4O60575 86 aa11□□□□□ -0.65
COL1A1-211ENST00000507689 ZNF726P1Q15940 193 aa11□□□□□ -0.65
COL1A1-211ENST00000507689 CST9LP1Q5W188 147 aa11□□□□□ -0.65
COL1A1-211ENST00000507689 DPPA3Q6W0C5 159 aa11□□□□□ -0.65
COL1A1-211ENST00000507689 TMUB2Q71RG4 321 aa11□□□□□ -0.65
COL1A1-211ENST00000507689 OR11H4Q8NGC9 324 aa11□□□□□ -0.65
COL1A1-211ENST00000507689 FAM213BQ8TBF2 198 aa11□□□□□ -0.65
COL1A1-211ENST00000507689 SFT2D1Q8WV19 159 aa11□□□□□ -0.65
COL1A1-211ENST00000507689 HIST1H2BAQ96A08 127 aa11□□□□□ -0.65
COL1A1-211ENST00000507689 A0A0J9YY99 117 aa10.99□□□□□ -0.65
COL1A1-211ENST00000507689 SLAQ13239 276 aa10.99□□□□□ -0.65
COL1A1-211ENST00000507689 C18orf15Q96N68 181 aa10.99□□□□□ -0.65
COL1A1-211ENST00000507689 TCEAL7Q9BRU2 100 aa10.99□□□□□ -0.65
COL1A1-211ENST00000507689 MRPL16Q9NX20 251 aaKnown RBP10.99□□□□□ -0.65
COL1A1-211ENST00000507689 H3BNG1 76 aa10.98□□□□□ -0.65
COL1A1-211ENST00000507689 TEX46H3BTG2 121 aa10.98□□□□□ -0.65
COL1A1-211ENST00000507689 PEX7O00628 323 aa10.98□□□□□ -0.65
COL1A1-211ENST00000507689 GCGP01275 180 aa10.98□□□□□ -0.65
COL1A1-211ENST00000507689 UBE2G1P62253 170 aa10.98□□□□□ -0.65
COL1A1-211ENST00000507689 TDRG1Q3Y452 100 aa10.98□□□□□ -0.65
COL1A1-211ENST00000507689 RYR2Q92736 4967 aa10.97□□□□□ -0.65
COL1A1-211ENST00000507689 TRGV4A0A0C4DH28 118 aa10.97□□□□□ -0.65
COL1A1-211ENST00000507689 FAM74A7A6NL05 159 aa10.97□□□□□ -0.65
COL1A1-211ENST00000507689 PFN1P07737 140 aaKnown RBP10.97□□□□□ -0.65
COL1A1-211ENST00000507689 H2AFB1P0C5Y9 115 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms