RNA–Protein interactions for RNA: ENST00000506981.1

LMNA-221, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-221ENST00000506981 GGTLC3B5MD39 225 aa13.76□□□□□ -0.21
LMNA-221ENST00000506981 ZNF324O75467 553 aaPredicted RBP13.76□□□□□ -0.21
LMNA-221ENST00000506981 LY6G6CO95867 125 aa13.76□□□□□ -0.21
LMNA-221ENST00000506981 TCRAP04437 139 aa13.76□□□□□ -0.21
LMNA-221ENST00000506981 UBE2G2P60604 165 aa13.76□□□□□ -0.21
LMNA-221ENST00000506981 FAM213BQ8TBF2 198 aa13.76□□□□□ -0.21
LMNA-221ENST00000506981 TMPRSS5Q9H3S3 457 aa13.76□□□□□ -0.21
LMNA-221ENST00000506981 NOP10Q9NPE3 64 aaKnown RBP13.76□□□□□ -0.21
LMNA-221ENST00000506981 PLA2G2EQ9NZK7 142 aa13.76□□□□□ -0.21
LMNA-221ENST00000506981 IFNA7P01567 189 aa13.75□□□□□ -0.21
LMNA-221ENST00000506981 EIF5AL1Q6IS14 154 aaKnown RBP13.75□□□□□ -0.21
LMNA-221ENST00000506981 DPPA3Q6W0C5 159 aa13.75□□□□□ -0.21
LMNA-221ENST00000506981 LINC00467Q9BRT7 94 aa13.75□□□□□ -0.21
LMNA-221ENST00000506981 NKX6-2Q9C056 277 aaPredicted RBP13.75□□□□□ -0.21
LMNA-221ENST00000506981 EPDR1Q9UM22 224 aa13.75□□□□□ -0.21
LMNA-221ENST00000506981 TRAV8-1A0A0A6YYK1 113 aa13.74□□□□□ -0.21
LMNA-221ENST00000506981 ANXA2RQ3ZCQ2 193 aa13.74□□□□□ -0.21
LMNA-221ENST00000506981 LGALSLQ3ZCW2 172 aaPredicted RBP13.74□□□□□ -0.21
LMNA-221ENST00000506981 CYB561D1Q8N8Q1 229 aa13.74□□□□□ -0.21
LMNA-221ENST00000506981 ATG101Q9BSB4 218 aa13.74□□□□□ -0.21
LMNA-221ENST00000506981 TREM1Q9NP99 234 aa13.74□□□□□ -0.21
LMNA-221ENST00000506981 IGHV1OR15-1A0A075B7D0 117 aa13.73□□□□□ -0.21
LMNA-221ENST00000506981 FBLL1A6NHQ2 334 aaKnown RBP13.73□□□□□ -0.21
LMNA-221ENST00000506981 FHITP49789 147 aa13.73□□□□□ -0.21
LMNA-221ENST00000506981 FAM210BQ96KR6 192 aa13.73□□□□□ -0.21
LMNA-221ENST00000506981 NDUFAF3Q9BU61 184 aa13.73□□□□□ -0.21
LMNA-221ENST00000506981 FAM74A7A6NL05 159 aa13.72□□□□□ -0.21
LMNA-221ENST00000506981 Q6AWC8 147 aa13.72□□□□□ -0.21
LMNA-221ENST00000506981 SFT2D1Q8WV19 159 aa13.72□□□□□ -0.21
LMNA-221ENST00000506981 SGK494Q96LW2 274 aa13.72□□□□□ -0.21
LMNA-221ENST00000506981 APLNQ9ULZ1 77 aa13.72□□□□□ -0.21
LMNA-221ENST00000506981 DYNC2H1Q8NCM8 4307 aaKnown RBP13.71□□□□□ -0.21
LMNA-221ENST00000506981 F6UZH7 168 aa13.71□□□□□ -0.21
LMNA-221ENST00000506981 ATP5G1P05496 136 aa13.71□□□□□ -0.21
LMNA-221ENST00000506981 ATP5G3P48201 142 aa13.71□□□□□ -0.21
LMNA-221ENST00000506981 PPT1P50897 306 aa13.71□□□□□ -0.21
LMNA-221ENST00000506981 FLI1Q01543 452 aaPredicted RBP13.71□□□□□ -0.21
LMNA-221ENST00000506981 ZFP69Q49AA0 526 aa13.71□□□□□ -0.21
LMNA-221ENST00000506981 FAM159AQ6UWV7 190 aa13.71□□□□□ -0.21
LMNA-221ENST00000506981 TMEM75Q8N9X5 138 aa13.71□□□□□ -0.21
LMNA-221ENST00000506981 GSN-AS1Q9NRJ2 163 aa13.71□□□□□ -0.21
LMNA-221ENST00000506981 PSG8Q9UQ74 426 aa13.71□□□□□ -0.21
LMNA-221ENST00000506981 TRAV21A0A0B4J279 112 aa13.7□□□□□ -0.22
LMNA-221ENST00000506981 H2AFB1P0C5Y9 115 aa13.7□□□□□ -0.22
LMNA-221ENST00000506981 ZNF415Q09FC8 603 aa13.7□□□□□ -0.22
LMNA-221ENST00000506981 DAZ2Q13117 558 aaKnown RBP13.7□□□□□ -0.22
LMNA-221ENST00000506981 MUC21Q5SSG8 566 aa13.7□□□□□ -0.22
LMNA-221ENST00000506981 IBA57Q5T440 356 aaKnown RBP13.7□□□□□ -0.22
LMNA-221ENST00000506981 CST9LP1Q5W188 147 aa13.7□□□□□ -0.22
LMNA-221ENST00000506981 LGALS9CQ6DKI2 356 aa13.7□□□□□ -0.22
LMNA-221ENST00000506981 PRNTQ86SH4 94 aa13.7□□□□□ -0.22
LMNA-221ENST00000506981 SLC51BQ86UW2 128 aa13.7□□□□□ -0.22
LMNA-221ENST00000506981 MBD3L1Q8WWY6 194 aa13.7□□□□□ -0.22
LMNA-221ENST00000506981 HIST1H2BAQ96A08 127 aa13.7□□□□□ -0.22
LMNA-221ENST00000506981 LYSTQ99698 3801 aa13.7□□□□□ -0.22
LMNA-221ENST00000506981 NAGKQ9UJ70 344 aa13.7□□□□□ -0.22
LMNA-221ENST00000506981 ARL2-SNX15V9GYD0 113 aa13.7□□□□□ -0.22
LMNA-221ENST00000506981 A0A1B0GV50 99 aa13.69□□□□□ -0.22
LMNA-221ENST00000506981 GAGE12BA1L429 117 aa13.69□□□□□ -0.22
LMNA-221ENST00000506981 PEX7O00628 323 aa13.69□□□□□ -0.22
LMNA-221ENST00000506981 GAGE7O76087 117 aa13.69□□□□□ -0.22
LMNA-221ENST00000506981 GAGE12FP0CL80 117 aa13.69□□□□□ -0.22
LMNA-221ENST00000506981 GAGE12GP0CL81 117 aa13.69□□□□□ -0.22
LMNA-221ENST00000506981 GAGE12IP0CL82 117 aa13.69□□□□□ -0.22
LMNA-221ENST00000506981 RAB5CP51148 216 aa13.69□□□□□ -0.22
LMNA-221ENST00000506981 TCL1AP56279 114 aa13.69□□□□□ -0.22
LMNA-221ENST00000506981 Q6ZQT7 251 aa13.69□□□□□ -0.22
LMNA-221ENST00000506981 C11orf72Q8NBR9 251 aa13.69□□□□□ -0.22
LMNA-221ENST00000506981 TRGV11A0A075B6L2 103 aa13.68□□□□□ -0.22
LMNA-221ENST00000506981 F5H768 121 aa13.68□□□□□ -0.22
LMNA-221ENST00000506981 SAPCD1Q5SSQ6 148 aa13.68□□□□□ -0.22
LMNA-221ENST00000506981 TVP23CQ96ET8 276 aa13.68□□□□□ -0.22
LMNA-221ENST00000506981 TCEAL7Q9BRU2 100 aa13.68□□□□□ -0.22
LMNA-221ENST00000506981 ALMS1Q8TCU4 4167 aa13.67□□□□□ -0.22
LMNA-221ENST00000506981 TEX46H3BTG2 121 aa13.67□□□□□ -0.22
LMNA-221ENST00000506981 SMUG1Q53HV7 270 aa13.67□□□□□ -0.22
LMNA-221ENST00000506981 TP53TG3Q9ULZ0 132 aa13.67□□□□□ -0.22
LMNA-221ENST00000506981 TRGV1A0A0A0MS02 117 aa13.66□□□□□ -0.22
LMNA-221ENST00000506981 PAGE4O60829 102 aa13.66□□□□□ -0.22
LMNA-221ENST00000506981 IGLV2-11P01706 119 aa13.66□□□□□ -0.22
LMNA-221ENST00000506981 TMEM183BQ1AE95 376 aa13.66□□□□□ -0.22
LMNA-221ENST00000506981 TMEM88Q6PEY1 159 aa13.66□□□□□ -0.22
LMNA-221ENST00000506981 Q6ZTI0 123 aa13.66□□□□□ -0.22
LMNA-221ENST00000506981 TMEM183AQ8IXX5 376 aa13.66□□□□□ -0.22
LMNA-221ENST00000506981 LINC00612Q8N6U2 182 aa13.66□□□□□ -0.22
LMNA-221ENST00000506981 C8orf49Q96NF6 230 aa13.66□□□□□ -0.22
LMNA-221ENST00000506981 KLF12Q9Y4X4 402 aa13.66□□□□□ -0.22
LMNA-221ENST00000506981 PLECQ15149 4684 aaKnown RBP13.66□□□□□ -0.22
LMNA-221ENST00000506981 TRGV2A0A075B6R0 118 aa13.65□□□□□ -0.22
LMNA-221ENST00000506981 TRAV34A0A0B4J273 112 aa13.65□□□□□ -0.22
LMNA-221ENST00000506981 GCGP01275 180 aa13.65□□□□□ -0.22
LMNA-221ENST00000506981 UBE2G1P62253 170 aa13.65□□□□□ -0.22
LMNA-221ENST00000506981 C9orf62Q8N4C0 152 aa13.65□□□□□ -0.22
LMNA-221ENST00000506981 C15orf53Q8NAA6 179 aa13.65□□□□□ -0.22
LMNA-221ENST00000506981 KCNS1Q96KK3 526 aa13.65□□□□□ -0.22
LMNA-221ENST00000506981 SDF2L1Q9HCN8 221 aa13.65□□□□□ -0.22
LMNA-221ENST00000506981 A0A1B0GVG6 124 aa13.64□□□□□ -0.23
LMNA-221ENST00000506981 P0DMU3 169 aa13.64□□□□□ -0.23
LMNA-221ENST00000506981 FAM231AP0DMU4 169 aa13.64□□□□□ -0.23
LMNA-221ENST00000506981 FAM231CP0DMU5 169 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms