RNA–Protein interactions for RNA: ENST00000506409.1

MED28-204, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 347 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-204ENST00000506409 TMED6Q8WW62 240 aa10.93□□□□□ -0.66
MED28-204ENST00000506409 EPPK1P58107 5090 aaKnown RBP10.92□□□□□ -0.66
MED28-204ENST00000506409 CXorf1O96002 111 aa10.92□□□□□ -0.66
MED28-204ENST00000506409 GNG5P63218 68 aa10.92□□□□□ -0.66
MED28-204ENST00000506409 Q6ZTI0 123 aa10.92□□□□□ -0.66
MED28-204ENST00000506409 ST6GAL2Q96JF0 529 aa10.92□□□□□ -0.66
MED28-204ENST00000506409 ARPC5LQ9BPX5 153 aa10.92□□□□□ -0.66
MED28-204ENST00000506409 TMEM167BQ9NRX6 74 aa10.92□□□□□ -0.66
MED28-204ENST00000506409 TCL1AP56279 114 aa10.91□□□□□ -0.66
MED28-204ENST00000506409 IBA57Q5T440 356 aaKnown RBP10.91□□□□□ -0.66
MED28-204ENST00000506409 SSX7Q7RTT5 188 aa10.91□□□□□ -0.66
MED28-204ENST00000506409 IQCF2Q8IXL9 164 aa10.91□□□□□ -0.66
MED28-204ENST00000506409 C5orf17Q8NAS9 161 aa10.91□□□□□ -0.66
MED28-204ENST00000506409 SUN5Q8TC36 379 aa10.91□□□□□ -0.66
MED28-204ENST00000506409 TP53TG3Q9ULZ0 132 aa10.91□□□□□ -0.66
MED28-204ENST00000506409 TRGV2A0A075B6R0 118 aa10.9□□□□□ -0.66
MED28-204ENST00000506409 TRGV1A0A0A0MS02 117 aa10.9□□□□□ -0.66
MED28-204ENST00000506409 TRAV8-1A0A0A6YYK1 113 aa10.9□□□□□ -0.66
MED28-204ENST00000506409 NUDT3O95989 172 aa10.9□□□□□ -0.66
MED28-204ENST00000506409 OR5I1Q13606 314 aa10.9□□□□□ -0.66
MED28-204ENST00000506409 RNF212Q495C1 297 aa10.9□□□□□ -0.66
MED28-204ENST00000506409 MUC21Q5SSG8 566 aa10.9□□□□□ -0.66
MED28-204ENST00000506409 AKR1C8PQ5T2L2 129 aa10.9□□□□□ -0.66
MED28-204ENST00000506409 Q6AWC8 147 aa10.9□□□□□ -0.66
MED28-204ENST00000506409 CYTL1Q9NRR1 136 aa10.9□□□□□ -0.66
MED28-204ENST00000506409 KLF12Q9Y4X4 402 aa10.9□□□□□ -0.66
MED28-204ENST00000506409 CTXND1A0A1B0GTU2 59 aa10.89□□□□□ -0.67
MED28-204ENST00000506409 SERTM2A0A1B0GWG4 89 aa10.89□□□□□ -0.67
MED28-204ENST00000506409 ZNF726P1Q15940 193 aa10.89□□□□□ -0.67
MED28-204ENST00000506409 ATG101Q9BSB4 218 aa10.89□□□□□ -0.67
MED28-204ENST00000506409 TMPRSS5Q9H3S3 457 aa10.89□□□□□ -0.67
MED28-204ENST00000506409 TRAV26-1A0A087WT03 109 aa10.88□□□□□ -0.67
MED28-204ENST00000506409 GGTLC3B5MD39 225 aa10.88□□□□□ -0.67
MED28-204ENST00000506409 K7EQM0 130 aa10.88□□□□□ -0.67
MED28-204ENST00000506409 SPINK4O60575 86 aa10.88□□□□□ -0.67
MED28-204ENST00000506409 TCRAP04437 139 aa10.88□□□□□ -0.67
MED28-204ENST00000506409 HOXA5P20719 270 aa10.88□□□□□ -0.67
MED28-204ENST00000506409 SUMO1P63165 101 aaKnown RBP10.88□□□□□ -0.67
MED28-204ENST00000506409 ZNF415Q09FC8 603 aa10.88□□□□□ -0.67
MED28-204ENST00000506409 ZNF345Q14585 488 aa10.88□□□□□ -0.67
MED28-204ENST00000506409 FAM159AQ6UWV7 190 aa10.88□□□□□ -0.67
MED28-204ENST00000506409 TREM1Q9NP99 234 aa10.88□□□□□ -0.67
MED28-204ENST00000506409 F6UZH7 168 aa10.87□□□□□ -0.67
MED28-204ENST00000506409 KCNRGQ8N5I3 272 aa10.87□□□□□ -0.67
MED28-204ENST00000506409 TVP23CQ96ET8 276 aa10.87□□□□□ -0.67
MED28-204ENST00000506409 SGK494Q96LW2 274 aa10.87□□□□□ -0.67
MED28-204ENST00000506409 C18orf15Q96N68 181 aa10.87□□□□□ -0.67
MED28-204ENST00000506409 NDFIP1Q9BT67 221 aa10.87□□□□□ -0.67
MED28-204ENST00000506409 NAGKQ9UJ70 344 aa10.87□□□□□ -0.67
MED28-204ENST00000506409 DNAH6Q9C0G6 4158 aa10.87□□□□□ -0.67
MED28-204ENST00000506409 IGLV2-18A0A075B6J9 118 aa10.86□□□□□ -0.67
MED28-204ENST00000506409 TRGV11A0A075B6L2 103 aa10.86□□□□□ -0.67
MED28-204ENST00000506409 TRAV21A0A0B4J279 112 aa10.86□□□□□ -0.67
MED28-204ENST00000506409 A0A0J9YY99 117 aa10.86□□□□□ -0.67
MED28-204ENST00000506409 A0A1W2PRE2 83 aa10.86□□□□□ -0.67
MED28-204ENST00000506409 HMSDA8MTL9 139 aa10.86□□□□□ -0.67
MED28-204ENST00000506409 M0R2N4 97 aa10.86□□□□□ -0.67
MED28-204ENST00000506409 TMEM183BQ1AE95 376 aa10.86□□□□□ -0.67
MED28-204ENST00000506409 LGALS9BQ3B8N2 356 aa10.86□□□□□ -0.67
MED28-204ENST00000506409 TMEM183AQ8IXX5 376 aa10.86□□□□□ -0.67
MED28-204ENST00000506409 OR11H4Q8NGC9 324 aa10.86□□□□□ -0.67
MED28-204ENST00000506409 MRPL16Q9NX20 251 aaKnown RBP10.86□□□□□ -0.67
MED28-204ENST00000506409 MDFICQ9P1T7 246 aa10.86□□□□□ -0.67
MED28-204ENST00000506409 EPDR1Q9UM22 224 aa10.86□□□□□ -0.67
MED28-204ENST00000506409 FGF8P55075 233 aaPredicted RBP10.85□□□□□ -0.67
MED28-204ENST00000506409 CCL18P55774 89 aa10.85□□□□□ -0.67
MED28-204ENST00000506409 FAM3BP58499 235 aaPredicted RBP10.85□□□□□ -0.67
MED28-204ENST00000506409 TDRG1Q3Y452 100 aa10.85□□□□□ -0.67
MED28-204ENST00000506409 CYB561D1Q8N8Q1 229 aa10.85□□□□□ -0.67
MED28-204ENST00000506409 A0A0D9SG52 128 aa10.84□□□□□ -0.67
MED28-204ENST00000506409 MAP1LC3B2A6NCE7 125 aa10.84□□□□□ -0.67
MED28-204ENST00000506409 H3BNG1 76 aa10.84□□□□□ -0.67
MED28-204ENST00000506409 UBE2G2P60604 165 aa10.84□□□□□ -0.67
MED28-204ENST00000506409 FLI1Q01543 452 aaPredicted RBP10.84□□□□□ -0.67
MED28-204ENST00000506409 MAP1LC3BQ9GZQ8 125 aa10.84□□□□□ -0.67
MED28-204ENST00000506409 PSG8Q9UQ74 426 aa10.84□□□□□ -0.67
MED28-204ENST00000506409 NACAE9PAV3 2078 aa10.84□□□□□ -0.67
MED28-204ENST00000506409 FRAS1Q86XX4 4008 aa10.83□□□□□ -0.68
MED28-204ENST00000506409 KANTRA0A1W2PQU2 76 aa10.83□□□□□ -0.68
MED28-204ENST00000506409 FBLL1A6NHQ2 334 aaKnown RBP10.83□□□□□ -0.68
MED28-204ENST00000506409 IFNA7P01567 189 aa10.83□□□□□ -0.68
MED28-204ENST00000506409 IGLV2-11P01706 119 aa10.83□□□□□ -0.68
MED28-204ENST00000506409 PRNTQ86SH4 94 aa10.83□□□□□ -0.68
MED28-204ENST00000506409 TMEM75Q8N9X5 138 aa10.83□□□□□ -0.68
MED28-204ENST00000506409 C8orf49Q96NF6 230 aa10.83□□□□□ -0.68
MED28-204ENST00000506409 SPXQ9BT56 116 aa10.83□□□□□ -0.68
MED28-204ENST00000506409 ZNF471Q9BX82 626 aaPredicted RBP10.83□□□□□ -0.68
MED28-204ENST00000506409 DNAH10Q8IVF4 4471 aa10.82□□□□□ -0.68
MED28-204ENST00000506409 MUC4Q99102 2169 aa10.82□□□□□ -0.68
MED28-204ENST00000506409 FAM74A7A6NL05 159 aa10.82□□□□□ -0.68
MED28-204ENST00000506409 BCL2L11O43521 198 aa10.82□□□□□ -0.68
MED28-204ENST00000506409 IGHV3-53P01767 116 aa10.82□□□□□ -0.68
MED28-204ENST00000506409 SEC11BP0C7V7 166 aa10.82□□□□□ -0.68
MED28-204ENST00000506409 ZFP69Q49AA0 526 aa10.82□□□□□ -0.68
MED28-204ENST00000506409 STOML3Q8TAV4 291 aa10.82□□□□□ -0.68
MED28-204ENST00000506409 KCNS1Q96KK3 526 aa10.82□□□□□ -0.68
MED28-204ENST00000506409 NKX6-2Q9C056 277 aaPredicted RBP10.82□□□□□ -0.68
MED28-204ENST00000506409 SDF2L1Q9HCN8 221 aa10.82□□□□□ -0.68
MED28-204ENST00000506409 LINC00588Q9Y4M8 146 aa10.82□□□□□ -0.68
MED28-204ENST00000506409 GNRH2O43555 120 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms