RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 SPANXA1Q9NS26 97 aa0.81□□□□□ -2.28
SMC4-225ENST00000497203 GINS2Q9Y248 185 aa0.81□□□□□ -2.28
SMC4-225ENST00000497203 ANK1P16157 1881 aa0.81□□□□□ -2.28
SMC4-225ENST00000497203 ZDBF2Q9HCK1 2354 aa0.81□□□□□ -2.28
SMC4-225ENST00000497203 LOC107984156A0A0G2JMH3 177 aa0.8□□□□□ -2.28
SMC4-225ENST00000497203 A0A1W2PPB8 328 aa0.8□□□□□ -2.28
SMC4-225ENST00000497203 A0A1W2PRS3 328 aa0.8□□□□□ -2.28
SMC4-225ENST00000497203 KIR3DP1A8MWS1 328 aa0.8□□□□□ -2.28
SMC4-225ENST00000497203 K7EIL1 84 aa0.8□□□□□ -2.28
SMC4-225ENST00000497203 HBDP02042 147 aa0.8□□□□□ -2.28
SMC4-225ENST00000497203 GYPBP06028 91 aa0.8□□□□□ -2.28
SMC4-225ENST00000497203 SLC25A4P12235 298 aa0.8□□□□□ -2.28
SMC4-225ENST00000497203 FXYD6P3P58550 94 aa0.8□□□□□ -2.28
SMC4-225ENST00000497203 BLCAPP62952 87 aa0.8□□□□□ -2.28
SMC4-225ENST00000497203 ARL17AQ8IVW1 177 aa0.8□□□□□ -2.28
SMC4-225ENST00000497203 BRK1Q8WUW1 75 aa0.8□□□□□ -2.28
SMC4-225ENST00000497203 FGD6Q6ZV73 1430 aa0.8□□□□□ -2.28
SMC4-225ENST00000497203 NUPR2A6NF83 97 aa0.79□□□□□ -2.28
SMC4-225ENST00000497203 J3KT08 172 aa0.79□□□□□ -2.28
SMC4-225ENST00000497203 M0QZK8 103 aa0.79□□□□□ -2.28
SMC4-225ENST00000497203 UQCRQO14949 82 aa0.79□□□□□ -2.28
SMC4-225ENST00000497203 CCL4P13236 92 aa0.79□□□□□ -2.28
SMC4-225ENST00000497203 GTF2A1P52655 376 aaPredicted RBP0.79□□□□□ -2.28
SMC4-225ENST00000497203 ASB16-AS1Q495Z4 193 aa0.79□□□□□ -2.28
SMC4-225ENST00000497203 Q6ZS92 163 aa0.79□□□□□ -2.28
SMC4-225ENST00000497203 SMIM7Q9BQ49 75 aa0.79□□□□□ -2.28
SMC4-225ENST00000497203 MRPL40Q9NQ50 206 aaKnown RBP0.79□□□□□ -2.28
SMC4-225ENST00000497203 SPANXCQ9NY87 97 aa0.79□□□□□ -2.28
SMC4-225ENST00000497203 MYH1P12882 1939 aa0.78□□□□□ -2.28
SMC4-225ENST00000497203 EDF1O60869 148 aaKnown RBP0.78□□□□□ -2.28
SMC4-225ENST00000497203 NBEAP1P0C6P0 100 aa0.78□□□□□ -2.28
SMC4-225ENST00000497203 SNRPD3P62318 126 aaKnown RBP0.78□□□□□ -2.28
SMC4-225ENST00000497203 PSPHP78330 225 aa0.78□□□□□ -2.28
SMC4-225ENST00000497203 DR1Q01658 176 aa0.78□□□□□ -2.28
SMC4-225ENST00000497203 Q86TA4 180 aa0.78□□□□□ -2.28
SMC4-225ENST00000497203 OR8I2Q8N0Y5 310 aa0.78□□□□□ -2.28
SMC4-225ENST00000497203 OR8J3Q8NGG0 315 aa0.78□□□□□ -2.28
SMC4-225ENST00000497203 CCL19Q99731 98 aa0.78□□□□□ -2.28
SMC4-225ENST00000497203 MED23Q9ULK4 1368 aa0.78□□□□□ -2.28
SMC4-225ENST00000497203 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.78□□□□□ -2.29
SMC4-225ENST00000497203 PNMA8CA0A1B0GUJ8 204 aa0.77□□□□□ -2.29
SMC4-225ENST00000497203 TMEM189A5PLL7 270 aa0.77□□□□□ -2.29
SMC4-225ENST00000497203 DPM2O94777 84 aa0.77□□□□□ -2.29
SMC4-225ENST00000497203 PRB4P10163 310 aaPredicted RBP0.77□□□□□ -2.29
SMC4-225ENST00000497203 CKS2P33552 79 aa0.77□□□□□ -2.29
SMC4-225ENST00000497203 TAC4Q86UU9 113 aa0.77□□□□□ -2.29
SMC4-225ENST00000497203 DSPPQ9NZW4 1301 aa0.77□□□□□ -2.29
SMC4-225ENST00000497203 XIRP1Q702N8 1843 aaKnown RBP0.77□□□□□ -2.29
SMC4-225ENST00000497203 ATG2AQ2TAZ0 1938 aa0.76□□□□□ -2.29
SMC4-225ENST00000497203 OVOS2A0A0G2JMS6 1433 aa0.76□□□□□ -2.29
SMC4-225ENST00000497203 ZNF469Q96JG9 3925 aaPredicted RBP0.76□□□□□ -2.29
SMC4-225ENST00000497203 A0A1B0GX51 115 aa0.76□□□□□ -2.29
SMC4-225ENST00000497203 CAV3P56539 151 aa0.76□□□□□ -2.29
SMC4-225ENST00000497203 XAF1Q6GPH4 301 aa0.76□□□□□ -2.29
SMC4-225ENST00000497203 SPATA8Q6RVD6 105 aa0.76□□□□□ -2.29
SMC4-225ENST00000497203 MRPL35Q9NZE8 188 aaKnown RBP0.76□□□□□ -2.29
SMC4-225ENST00000497203 KNTC1P50748 2209 aa0.75□□□□□ -2.29
SMC4-225ENST00000497203 TRAV36DV7A0A075B6V5 113 aa0.75□□□□□ -2.29
SMC4-225ENST00000497203 TMEM30CPA0ZSE6 113 aa0.75□□□□□ -2.29
SMC4-225ENST00000497203 IGF2P01344 180 aa0.75□□□□□ -2.29
SMC4-225ENST00000497203 HIST1H1BP16401 226 aaKnown RBP0.75□□□□□ -2.29
SMC4-225ENST00000497203 CSAG1Q6PB30 78 aa0.75□□□□□ -2.29
SMC4-225ENST00000497203 IDO2Q6ZQW0 420 aa0.75□□□□□ -2.29
SMC4-225ENST00000497203 C10orf95Q9H7T3 257 aa0.75□□□□□ -2.29
SMC4-225ENST00000497203 JPT1Q9UK76 154 aa0.75□□□□□ -2.29
SMC4-225ENST00000497203 TRPM7Q96QT4 1865 aa0.74□□□□□ -2.29
SMC4-225ENST00000497203 IGHV1-24A0A0C4DH33 117 aa0.74□□□□□ -2.29
SMC4-225ENST00000497203 DEGS1O15121 323 aa0.74□□□□□ -2.29
SMC4-225ENST00000497203 SLC25A5P05141 298 aaKnown RBP0.74□□□□□ -2.29
SMC4-225ENST00000497203 PAEPP09466 180 aa0.74□□□□□ -2.29
SMC4-225ENST00000497203 SPINT3P49223 89 aa0.74□□□□□ -2.29
SMC4-225ENST00000497203 PCBD1P61457 104 aa0.74□□□□□ -2.29
SMC4-225ENST00000497203 QRFPP83859 136 aa0.74□□□□□ -2.29
SMC4-225ENST00000497203 RHOHQ15669 191 aa0.74□□□□□ -2.29
SMC4-225ENST00000497203 HSD17B12Q53GQ0 312 aa0.74□□□□□ -2.29
SMC4-225ENST00000497203 C10orf99Q6UWK7 81 aa0.74□□□□□ -2.29
SMC4-225ENST00000497203 OTOSQ8NHW6 89 aa0.74□□□□□ -2.29
SMC4-225ENST00000497203 CALML5Q9NZT1 146 aa0.74□□□□□ -2.29
SMC4-225ENST00000497203 MRPL36Q9P0J6 103 aaKnown RBP0.74□□□□□ -2.29
SMC4-225ENST00000497203 CTTNBP2Q8WZ74 1663 aa0.74□□□□□ -2.29
SMC4-225ENST00000497203 ZNF462Q96JM2 2506 aa0.73□□□□□ -2.29
SMC4-225ENST00000497203 BORCS7-ASMTA0A0B4J1R7 106 aa0.73□□□□□ -2.29
SMC4-225ENST00000497203 TCRAP04437 139 aa0.73□□□□□ -2.29
SMC4-225ENST00000497203 EVI2AP22794 236 aa0.73□□□□□ -2.29
SMC4-225ENST00000497203 ZNF137PP52743 207 aa0.73□□□□□ -2.29
SMC4-225ENST00000497203 OR8B8Q15620 311 aa0.73□□□□□ -2.29
SMC4-225ENST00000497203 KRTAP19-3Q7Z4W3 81 aa0.73□□□□□ -2.29
SMC4-225ENST00000497203 PLAC4Q8WY50 150 aa0.73□□□□□ -2.29
SMC4-225ENST00000497203 MAGOHBQ96A72 148 aaKnown RBP0.73□□□□□ -2.29
SMC4-225ENST00000497203 METTL1Q9UBP6 276 aaKnown RBP0.73□□□□□ -2.29
SMC4-225ENST00000497203 A0A0D9SG42 100 aa0.72□□□□□ -2.29
SMC4-225ENST00000497203 A0A0G2JMM0 328 aa0.72□□□□□ -2.29
SMC4-225ENST00000497203 HIGD1CA8MV81 97 aa0.72□□□□□ -2.29
SMC4-225ENST00000497203 CDC42EP2O14613 210 aa0.72□□□□□ -2.29
SMC4-225ENST00000497203 TPST1O60507 370 aa0.72□□□□□ -2.29
SMC4-225ENST00000497203 SCTP09683 121 aa0.72□□□□□ -2.29
SMC4-225ENST00000497203 CCDC153Q494R4 210 aa0.72□□□□□ -2.29
SMC4-225ENST00000497203 DEFB132Q7Z7B7 95 aa0.72□□□□□ -2.29
SMC4-225ENST00000497203 PYDC1Q8WXC3 89 aa0.72□□□□□ -2.29
SMC4-225ENST00000497203 DMAC1Q96GE9 116 aa0.72□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms