RNA–Protein interactions for RNA: ENST00000496840.1

TARDBP-210, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 692 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-210ENST00000496840 CIB3Q96Q77 187 aaPredicted RBP0.9□□□□□ -2.27
TARDBP-210ENST00000496840 SMIM3Q9BZL3 60 aa0.9□□□□□ -2.27
TARDBP-210ENST00000496840 WFDC10AQ9H1F0 79 aa0.9□□□□□ -2.27
TARDBP-210ENST00000496840 UBR2Q8IWV8 1755 aa0.89□□□□□ -2.27
TARDBP-210ENST00000496840 E9PCH4 1651 aa0.89□□□□□ -2.27
TARDBP-210ENST00000496840 CECR2Q9BXF3 1484 aa0.89□□□□□ -2.27
TARDBP-210ENST00000496840 EDF1O60869 148 aaKnown RBP0.89□□□□□ -2.27
TARDBP-210ENST00000496840 HIST1H1BP16401 226 aaKnown RBP0.89□□□□□ -2.27
TARDBP-210ENST00000496840 SNRPD3P62318 126 aaKnown RBP0.89□□□□□ -2.27
TARDBP-210ENST00000496840 S100A12P80511 92 aa0.89□□□□□ -2.27
TARDBP-210ENST00000496840 SMIM21Q3B7S5 101 aa0.89□□□□□ -2.27
TARDBP-210ENST00000496840 C5orf17Q8NAS9 161 aa0.89□□□□□ -2.27
TARDBP-210ENST00000496840 OR4S1Q8NGB4 309 aa0.89□□□□□ -2.27
TARDBP-210ENST00000496840 OTOSQ8NHW6 89 aa0.89□□□□□ -2.27
TARDBP-210ENST00000496840 MAGOHBQ96A72 148 aaKnown RBP0.89□□□□□ -2.27
TARDBP-210ENST00000496840 FAM107BQ9H098 131 aa0.89□□□□□ -2.27
TARDBP-210ENST00000496840 COPZ2Q9P299 210 aa0.89□□□□□ -2.27
TARDBP-210ENST00000496840 TNFSF18Q9UNG2 199 aa0.89□□□□□ -2.27
TARDBP-210ENST00000496840 MPC1Q9Y5U8 109 aa0.89□□□□□ -2.27
TARDBP-210ENST00000496840 ALPK3Q96L96 1907 aa0.89□□□□□ -2.27
TARDBP-210ENST00000496840 TRAV23DV6A0A075B6W5 121 aa0.88□□□□□ -2.27
TARDBP-210ENST00000496840 IGLV3-32A0A0A0MS00 114 aa0.88□□□□□ -2.27
TARDBP-210ENST00000496840 IGHV1-24A0A0C4DH33 117 aa0.88□□□□□ -2.27
TARDBP-210ENST00000496840 BBIP1A8MTZ0 92 aa0.88□□□□□ -2.27
TARDBP-210ENST00000496840 ZNF727A8MUV8 499 aa0.88□□□□□ -2.27
TARDBP-210ENST00000496840 JMJD7-PLA2G4BH0Y9G9 81 aa0.88□□□□□ -2.27
TARDBP-210ENST00000496840 M0R2Z0 102 aa0.88□□□□□ -2.27
TARDBP-210ENST00000496840 IGHV3-33P01772 117 aa0.88□□□□□ -2.27
TARDBP-210ENST00000496840 CD14P08571 375 aa0.88□□□□□ -2.27
TARDBP-210ENST00000496840 COX4I1P13073 169 aa0.88□□□□□ -2.27
TARDBP-210ENST00000496840 CCL4P13236 92 aa0.88□□□□□ -2.27
TARDBP-210ENST00000496840 HLA-DRB4P13762 266 aa0.88□□□□□ -2.27
TARDBP-210ENST00000496840 KDELR1P24390 212 aa0.88□□□□□ -2.27
TARDBP-210ENST00000496840 DNAJB13P59910 316 aa0.88□□□□□ -2.27
TARDBP-210ENST00000496840 QRFPP83859 136 aa0.88□□□□□ -2.27
TARDBP-210ENST00000496840 TMEM91Q6ZNR0 172 aa0.88□□□□□ -2.27
TARDBP-210ENST00000496840 C10orf111Q8N326 155 aa0.88□□□□□ -2.27
TARDBP-210ENST00000496840 SMIM7Q9BQ49 75 aa0.88□□□□□ -2.27
TARDBP-210ENST00000496840 COMMD3Q9UBI1 195 aa0.88□□□□□ -2.27
TARDBP-210ENST00000496840 HLA-DRB4X5D2U9 266 aa0.88□□□□□ -2.27
TARDBP-210ENST00000496840 FGD6Q6ZV73 1430 aa0.88□□□□□ -2.27
TARDBP-210ENST00000496840 SNRNP200O75643 2136 aaKnown RBP0.88□□□□□ -2.27
TARDBP-210ENST00000496840 PNMA8CA0A1B0GUJ8 204 aa0.87□□□□□ -2.27
TARDBP-210ENST00000496840 IFITM5A6NNB3 132 aa0.87□□□□□ -2.27
TARDBP-210ENST00000496840 CDC42EP2O14613 210 aa0.87□□□□□ -2.27
TARDBP-210ENST00000496840 SULT1C4O75897 302 aa0.87□□□□□ -2.27
TARDBP-210ENST00000496840 HMGN1P05114 100 aa0.87□□□□□ -2.27
TARDBP-210ENST00000496840 MPC1LP0DKB6 136 aa0.87□□□□□ -2.27
TARDBP-210ENST00000496840 AKR1D1P51857 326 aa0.87□□□□□ -2.27
TARDBP-210ENST00000496840 SARNPP82979 210 aaKnown RBP0.87□□□□□ -2.27
TARDBP-210ENST00000496840 C3orf62Q6ZUJ4 267 aa0.87□□□□□ -2.27
TARDBP-210ENST00000496840 MMGT1Q8N4V1 131 aa0.87□□□□□ -2.27
TARDBP-210ENST00000496840 TCTEX1D1Q8N7M0 179 aa0.87□□□□□ -2.27
TARDBP-210ENST00000496840 PLPP5Q8NEB5 264 aa0.87□□□□□ -2.27
TARDBP-210ENST00000496840 TSTD1Q8NFU3 115 aa0.87□□□□□ -2.27
TARDBP-210ENST00000496840 TCEAL4Q96EI5 215 aa0.87□□□□□ -2.27
TARDBP-210ENST00000496840 LIMD2Q9BT23 127 aa0.87□□□□□ -2.27
TARDBP-210ENST00000496840 METTL1Q9UBP6 276 aaKnown RBP0.87□□□□□ -2.27
TARDBP-210ENST00000496840 NUP210Q8TEM1 1887 aaPredicted RBP0.86□□□□□ -2.27
TARDBP-210ENST00000496840 J3QR89 54 aa0.86□□□□□ -2.27
TARDBP-210ENST00000496840 CD3DP04234 171 aa0.86□□□□□ -2.27
TARDBP-210ENST00000496840 IGLC6P0CF74 106 aa0.86□□□□□ -2.27
TARDBP-210ENST00000496840 EVI2AP22794 236 aa0.86□□□□□ -2.27
TARDBP-210ENST00000496840 NCS1P62166 190 aa0.86□□□□□ -2.27
TARDBP-210ENST00000496840 CCDC58Q4VC31 144 aa0.86□□□□□ -2.27
TARDBP-210ENST00000496840 CLLU1Q5K131 121 aa0.86□□□□□ -2.27
TARDBP-210ENST00000496840 GLYATL3Q5SZD4 288 aa0.86□□□□□ -2.27
TARDBP-210ENST00000496840 IZUMO2Q6UXV1 221 aa0.86□□□□□ -2.27
TARDBP-210ENST00000496840 LINC00299Q6ZSB3 139 aa0.86□□□□□ -2.27
TARDBP-210ENST00000496840 OR8J3Q8NGG0 315 aa0.86□□□□□ -2.27
TARDBP-210ENST00000496840 PFDN5Q99471 154 aa0.86□□□□□ -2.27
TARDBP-210ENST00000496840 LPAR5Q9H1C0 372 aa0.86□□□□□ -2.27
TARDBP-210ENST00000496840 SLC35B3Q9H1N7 401 aa0.86□□□□□ -2.27
TARDBP-210ENST00000496840 DNAJC15Q9Y5T4 150 aa0.86□□□□□ -2.27
TARDBP-210ENST00000496840 COL24A1Q17RW2 1714 aa0.86□□□□□ -2.27
TARDBP-210ENST00000496840 MUC5BQ9HC84 5762 aaPredicted RBP0.85□□□□□ -2.27
TARDBP-210ENST00000496840 A0A1W2PPB8 328 aa0.85□□□□□ -2.27
TARDBP-210ENST00000496840 A0A1W2PRS3 328 aa0.85□□□□□ -2.27
TARDBP-210ENST00000496840 KIR3DP1A8MWS1 328 aa0.85□□□□□ -2.27
TARDBP-210ENST00000496840 K7ERU9 68 aa0.85□□□□□ -2.27
TARDBP-210ENST00000496840 NCR3O14931 201 aa0.85□□□□□ -2.27
TARDBP-210ENST00000496840 SOGA1O94964 1423 aa0.85□□□□□ -2.27
TARDBP-210ENST00000496840 EFNA4P52798 201 aa0.85□□□□□ -2.27
TARDBP-210ENST00000496840 ASB16-AS1Q495Z4 193 aa0.85□□□□□ -2.27
TARDBP-210ENST00000496840 CCSMST1Q4G0I0 132 aa0.85□□□□□ -2.27
TARDBP-210ENST00000496840 SPATA45Q537H7 98 aa0.85□□□□□ -2.27
TARDBP-210ENST00000496840 OCIAD2Q56VL3 154 aa0.85□□□□□ -2.27
TARDBP-210ENST00000496840 IDO2Q6ZQW0 420 aa0.85□□□□□ -2.27
TARDBP-210ENST00000496840 PEAK1Q9H792 1746 aa0.85□□□□□ -2.27
TARDBP-210ENST00000496840 UNC13CQ8NB66 2214 aa0.85□□□□□ -2.27
TARDBP-210ENST00000496840 MYO18AQ92614 2054 aaKnown RBP0.85□□□□□ -2.27
TARDBP-210ENST00000496840 ANKRD31Q8N7Z5 1873 aa0.84□□□□□ -2.27
TARDBP-210ENST00000496840 OVOS2A0A0J9YW53 1432 aa0.84□□□□□ -2.27
TARDBP-210ENST00000496840 OVOS2Q6IE36 1432 aa0.84□□□□□ -2.27
TARDBP-210ENST00000496840 ERBINQ96RT1 1412 aa0.84□□□□□ -2.27
TARDBP-210ENST00000496840 A0A0J9YY99 117 aa0.84□□□□□ -2.27
TARDBP-210ENST00000496840 FAM236AA0A1B0GUQ0 79 aa0.84□□□□□ -2.27
TARDBP-210ENST00000496840 FAM236BA0A1B0GV22 79 aa0.84□□□□□ -2.27
TARDBP-210ENST00000496840 IGLV3-1P01715 115 aa0.84□□□□□ -2.27
TARDBP-210ENST00000496840 RBP4P02753 201 aa0.84□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms