RNA–Protein interactions for RNA: ENST00000496570.1

DNMT3A-215, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-215ENST00000496570 RPH3ALQ9UNE2 315 aa11.35□□□□□ -0.59
DNMT3A-215ENST00000496570 CTXND1A0A1B0GTU2 59 aa11.34□□□□□ -0.59
DNMT3A-215ENST00000496570 CBY3A6NI87 242 aa11.34□□□□□ -0.59
DNMT3A-215ENST00000496570 DAZ2Q13117 558 aaKnown RBP11.34□□□□□ -0.59
DNMT3A-215ENST00000496570 EIF4E3Q8N5X7 224 aaKnown RBP11.34□□□□□ -0.59
DNMT3A-215ENST00000496570 GSN-AS1Q9NRJ2 163 aa11.34□□□□□ -0.59
DNMT3A-215ENST00000496570 TMEM167BQ9NRX6 74 aa11.34□□□□□ -0.59
DNMT3A-215ENST00000496570 IGHV1OR15-1A0A075B7D0 117 aa11.33□□□□□ -0.6
DNMT3A-215ENST00000496570 IGLV2-11P01706 119 aa11.33□□□□□ -0.6
DNMT3A-215ENST00000496570 TCRAP04437 139 aa11.33□□□□□ -0.6
DNMT3A-215ENST00000496570 AKR1C8PQ5T2L2 129 aa11.33□□□□□ -0.6
DNMT3A-215ENST00000496570 C5orf17Q8NAS9 161 aa11.33□□□□□ -0.6
DNMT3A-215ENST00000496570 KLF12Q9Y4X4 402 aa11.33□□□□□ -0.6
DNMT3A-215ENST00000496570 FRAS1Q86XX4 4008 aa11.32□□□□□ -0.6
DNMT3A-215ENST00000496570 A0A0D9SG52 128 aa11.32□□□□□ -0.6
DNMT3A-215ENST00000496570 SNURFLB1AK76 121 aa11.32□□□□□ -0.6
DNMT3A-215ENST00000496570 BCL2L11O43521 198 aa11.32□□□□□ -0.6
DNMT3A-215ENST00000496570 ATP5G1P05496 136 aa11.32□□□□□ -0.6
DNMT3A-215ENST00000496570 ATP5G3P48201 142 aa11.32□□□□□ -0.6
DNMT3A-215ENST00000496570 FHITP49789 147 aa11.32□□□□□ -0.6
DNMT3A-215ENST00000496570 FGF8P55075 233 aaPredicted RBP11.32□□□□□ -0.6
DNMT3A-215ENST00000496570 SUMO1P63165 101 aaKnown RBP11.32□□□□□ -0.6
DNMT3A-215ENST00000496570 Q6ZTI0 123 aa11.32□□□□□ -0.6
DNMT3A-215ENST00000496570 ZNF680Q8NEM1 530 aa11.32□□□□□ -0.6
DNMT3A-215ENST00000496570 SGK494Q96LW2 274 aa11.32□□□□□ -0.6
DNMT3A-215ENST00000496570 A0A1W2PRE2 83 aa11.31□□□□□ -0.6
DNMT3A-215ENST00000496570 GAGE12BA1L429 117 aa11.31□□□□□ -0.6
DNMT3A-215ENST00000496570 RGS13O14921 159 aa11.31□□□□□ -0.6
DNMT3A-215ENST00000496570 GAGE7O76087 117 aa11.31□□□□□ -0.6
DNMT3A-215ENST00000496570 GAGE12FP0CL80 117 aa11.31□□□□□ -0.6
DNMT3A-215ENST00000496570 GAGE12GP0CL81 117 aa11.31□□□□□ -0.6
DNMT3A-215ENST00000496570 GAGE12IP0CL82 117 aa11.31□□□□□ -0.6
DNMT3A-215ENST00000496570 TCL1AP56279 114 aa11.31□□□□□ -0.6
DNMT3A-215ENST00000496570 EPDR1Q9UM22 224 aa11.31□□□□□ -0.6
DNMT3A-215ENST00000496570 F5H768 121 aa11.3□□□□□ -0.6
DNMT3A-215ENST00000496570 F6UZH7 168 aa11.3□□□□□ -0.6
DNMT3A-215ENST00000496570 SPINK4O60575 86 aa11.3□□□□□ -0.6
DNMT3A-215ENST00000496570 SEC11BP0C7V7 166 aa11.3□□□□□ -0.6
DNMT3A-215ENST00000496570 HOXA5P20719 270 aa11.3□□□□□ -0.6
DNMT3A-215ENST00000496570 MUC21Q5SSG8 566 aa11.3□□□□□ -0.6
DNMT3A-215ENST00000496570 IBA57Q5T440 356 aaKnown RBP11.3□□□□□ -0.6
DNMT3A-215ENST00000496570 TMUB2Q71RG4 321 aa11.3□□□□□ -0.6
DNMT3A-215ENST00000496570 TCTE3Q8IZS6 198 aa11.3□□□□□ -0.6
DNMT3A-215ENST00000496570 DNAH2Q9P225 4427 aa11.29□□□□□ -0.6
DNMT3A-215ENST00000496570 SERTM2A0A1B0GWG4 89 aa11.29□□□□□ -0.6
DNMT3A-215ENST00000496570 MAP1LC3B2A6NCE7 125 aa11.29□□□□□ -0.6
DNMT3A-215ENST00000496570 FAM74A7A6NL05 159 aa11.29□□□□□ -0.6
DNMT3A-215ENST00000496570 P0DMU3 169 aa11.29□□□□□ -0.6
DNMT3A-215ENST00000496570 FAM231AP0DMU4 169 aa11.29□□□□□ -0.6
DNMT3A-215ENST00000496570 FAM231CP0DMU5 169 aa11.29□□□□□ -0.6
DNMT3A-215ENST00000496570 TDRG1Q3Y452 100 aa11.29□□□□□ -0.6
DNMT3A-215ENST00000496570 IQCF2Q8IXL9 164 aa11.29□□□□□ -0.6
DNMT3A-215ENST00000496570 POM121L12Q8N7R1 296 aa11.29□□□□□ -0.6
DNMT3A-215ENST00000496570 C18orf15Q96N68 181 aa11.29□□□□□ -0.6
DNMT3A-215ENST00000496570 C8orf49Q96NF6 230 aa11.29□□□□□ -0.6
DNMT3A-215ENST00000496570 ZNF471Q9BX82 626 aaPredicted RBP11.29□□□□□ -0.6
DNMT3A-215ENST00000496570 MAP1LC3BQ9GZQ8 125 aa11.29□□□□□ -0.6
DNMT3A-215ENST00000496570 KANTRA0A1W2PQU2 76 aa11.28□□□□□ -0.6
DNMT3A-215ENST00000496570 ZNF80P51504 273 aaPredicted RBP11.28□□□□□ -0.6
DNMT3A-215ENST00000496570 UBE2G2P60604 165 aa11.28□□□□□ -0.6
DNMT3A-215ENST00000496570 LGALSLQ3ZCW2 172 aaPredicted RBP11.28□□□□□ -0.6
DNMT3A-215ENST00000496570 CYB561D1Q8N8Q1 229 aa11.28□□□□□ -0.6
DNMT3A-215ENST00000496570 LINC00479Q96M42 142 aa11.28□□□□□ -0.6
DNMT3A-215ENST00000496570 TREM1Q9NP99 234 aa11.28□□□□□ -0.6
DNMT3A-215ENST00000496570 MDFICQ9P1T7 246 aa11.28□□□□□ -0.6
DNMT3A-215ENST00000496570 PSG8Q9UQ74 426 aa11.28□□□□□ -0.6
DNMT3A-215ENST00000496570 TMEM75Q8N9X5 138 aa11.27□□□□□ -0.61
DNMT3A-215ENST00000496570 C15orf53Q8NAA6 179 aa11.27□□□□□ -0.61
DNMT3A-215ENST00000496570 ATG101Q9BSB4 218 aa11.27□□□□□ -0.61
DNMT3A-215ENST00000496570 C11orf21Q9P2W6 132 aa11.27□□□□□ -0.61
DNMT3A-215ENST00000496570 BIRC6Q9NR09 4857 aa11.26□□□□□ -0.61
DNMT3A-215ENST00000496570 TRGV1A0A0A0MS02 117 aa11.26□□□□□ -0.61
DNMT3A-215ENST00000496570 FLI1Q01543 452 aaPredicted RBP11.26□□□□□ -0.61
DNMT3A-215ENST00000496570 STOML3Q8TAV4 291 aa11.26□□□□□ -0.61
DNMT3A-215ENST00000496570 MBD3L1Q8WWY6 194 aa11.26□□□□□ -0.61
DNMT3A-215ENST00000496570 MRPL16Q9NX20 251 aaKnown RBP11.26□□□□□ -0.61
DNMT3A-215ENST00000496570 NACAE9PAV3 2078 aa11.25□□□□□ -0.61
DNMT3A-215ENST00000496570 TRAV34A0A0B4J273 112 aa11.25□□□□□ -0.61
DNMT3A-215ENST00000496570 TRAV21A0A0B4J279 112 aa11.25□□□□□ -0.61
DNMT3A-215ENST00000496570 UMAD1C9J7I0 102 aa11.25□□□□□ -0.61
DNMT3A-215ENST00000496570 GNRH2O43555 120 aa11.25□□□□□ -0.61
DNMT3A-215ENST00000496570 TMEM183BQ1AE95 376 aa11.25□□□□□ -0.61
DNMT3A-215ENST00000496570 LGALS9BQ3B8N2 356 aa11.25□□□□□ -0.61
DNMT3A-215ENST00000496570 TMEM183AQ8IXX5 376 aa11.25□□□□□ -0.61
DNMT3A-215ENST00000496570 TRAV26-1A0A087WT03 109 aa11.24□□□□□ -0.61
DNMT3A-215ENST00000496570 IGHV3-16A0A0C4DH30 117 aa11.24□□□□□ -0.61
DNMT3A-215ENST00000496570 K7EQM0 130 aa11.24□□□□□ -0.61
DNMT3A-215ENST00000496570 PEX7O00628 323 aa11.24□□□□□ -0.61
DNMT3A-215ENST00000496570 C1QBP02746 253 aa11.24□□□□□ -0.61
DNMT3A-215ENST00000496570 ZNF415Q09FC8 603 aa11.24□□□□□ -0.61
DNMT3A-215ENST00000496570 OR5I1Q13606 314 aa11.24□□□□□ -0.61
DNMT3A-215ENST00000496570 FAM159AQ6UWV7 190 aa11.24□□□□□ -0.61
DNMT3A-215ENST00000496570 PRNTQ86SH4 94 aa11.24□□□□□ -0.61
DNMT3A-215ENST00000496570 FAM213BQ8TBF2 198 aa11.24□□□□□ -0.61
DNMT3A-215ENST00000496570 TRGV2A0A075B6R0 118 aa11.23□□□□□ -0.61
DNMT3A-215ENST00000496570 PFDN1O60925 122 aa11.23□□□□□ -0.61
DNMT3A-215ENST00000496570 TYMSP04818 313 aa11.23□□□□□ -0.61
DNMT3A-215ENST00000496570 TPT1P13693 172 aaKnown RBP11.23□□□□□ -0.61
DNMT3A-215ENST00000496570 RNF212Q495C1 297 aa11.23□□□□□ -0.61
DNMT3A-215ENST00000496570 DPPA3Q6W0C5 159 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms