RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 Q6AWC8 147 aa15.9■□□□□ 0.14
SNIP1-203ENST00000493916 Q6ZQT7 251 aa15.9■□□□□ 0.14
SNIP1-203ENST00000493916 GOLT1AQ6ZVE7 132 aa15.9■□□□□ 0.14
SNIP1-203ENST00000493916 SSX7Q7RTT5 188 aa15.9■□□□□ 0.14
SNIP1-203ENST00000493916 GSN-AS1Q9NRJ2 163 aa15.9■□□□□ 0.14
SNIP1-203ENST00000493916 CYTL1Q9NRR1 136 aa15.9■□□□□ 0.14
SNIP1-203ENST00000493916 SERTM2A0A1B0GWG4 89 aa15.89■□□□□ 0.13
SNIP1-203ENST00000493916 GAGE12BA1L429 117 aa15.89■□□□□ 0.13
SNIP1-203ENST00000493916 GAGE7O76087 117 aa15.89■□□□□ 0.13
SNIP1-203ENST00000493916 GAGE12FP0CL80 117 aa15.89■□□□□ 0.13
SNIP1-203ENST00000493916 GAGE12GP0CL81 117 aa15.89■□□□□ 0.13
SNIP1-203ENST00000493916 GAGE12IP0CL82 117 aa15.89■□□□□ 0.13
SNIP1-203ENST00000493916 TCL1AP56279 114 aa15.89■□□□□ 0.13
SNIP1-203ENST00000493916 ZNF345Q14585 488 aa15.89■□□□□ 0.13
SNIP1-203ENST00000493916 C5orf17Q8NAS9 161 aa15.89■□□□□ 0.13
SNIP1-203ENST00000493916 GNG5P63218 68 aa15.88■□□□□ 0.13
SNIP1-203ENST00000493916 ZNF726P1Q15940 193 aa15.88■□□□□ 0.13
SNIP1-203ENST00000493916 RNF212Q495C1 297 aa15.88■□□□□ 0.13
SNIP1-203ENST00000493916 Q6ZTI0 123 aa15.88■□□□□ 0.13
SNIP1-203ENST00000493916 FRAS1Q86XX4 4008 aa15.88■□□□□ 0.13
SNIP1-203ENST00000493916 CTXND1A0A1B0GTU2 59 aa15.87■□□□□ 0.13
SNIP1-203ENST00000493916 AKR1C8PQ5T2L2 129 aa15.87■□□□□ 0.13
SNIP1-203ENST00000493916 KCNRGQ8N5I3 272 aa15.87■□□□□ 0.13
SNIP1-203ENST00000493916 C18orf15Q96N68 181 aa15.87■□□□□ 0.13
SNIP1-203ENST00000493916 ARPC5LQ9BPX5 153 aa15.87■□□□□ 0.13
SNIP1-203ENST00000493916 TP53TG3Q9ULZ0 132 aa15.87■□□□□ 0.13
SNIP1-203ENST00000493916 HMSDA8MTL9 139 aa15.86■□□□□ 0.13
SNIP1-203ENST00000493916 SPINK4O60575 86 aa15.86■□□□□ 0.13
SNIP1-203ENST00000493916 TCRAP04437 139 aa15.86■□□□□ 0.13
SNIP1-203ENST00000493916 UBE2DNLQ8IWF7 75 aa15.86■□□□□ 0.13
SNIP1-203ENST00000493916 KLF12Q9Y4X4 402 aa15.86■□□□□ 0.13
SNIP1-203ENST00000493916 TRAV8-1A0A0A6YYK1 113 aa15.85■□□□□ 0.13
SNIP1-203ENST00000493916 GGTLC3B5MD39 225 aa15.85■□□□□ 0.13
SNIP1-203ENST00000493916 OR11H4Q8NGC9 324 aa15.85■□□□□ 0.13
SNIP1-203ENST00000493916 TMPRSS5Q9H3S3 457 aa15.85■□□□□ 0.13
SNIP1-203ENST00000493916 TRGV1A0A0A0MS02 117 aa15.84■□□□□ 0.13
SNIP1-203ENST00000493916 A0A1W2PRE2 83 aa15.84■□□□□ 0.13
SNIP1-203ENST00000493916 ZNF415Q09FC8 603 aa15.84■□□□□ 0.13
SNIP1-203ENST00000493916 TVP23CQ96ET8 276 aa15.84■□□□□ 0.13
SNIP1-203ENST00000493916 BIRC6Q9NR09 4857 aa15.84■□□□□ 0.13
SNIP1-203ENST00000493916 K7EQM0 130 aa15.83■□□□□ 0.12
SNIP1-203ENST00000493916 HOXA5P20719 270 aa15.83■□□□□ 0.12
SNIP1-203ENST00000493916 FAM3BP58499 235 aaPredicted RBP15.83■□□□□ 0.12
SNIP1-203ENST00000493916 LGALS9BQ3B8N2 356 aa15.83■□□□□ 0.12
SNIP1-203ENST00000493916 MUC21Q5SSG8 566 aa15.83■□□□□ 0.12
SNIP1-203ENST00000493916 IQCF2Q8IXL9 164 aa15.83■□□□□ 0.12
SNIP1-203ENST00000493916 TREM1Q9NP99 234 aa15.83■□□□□ 0.12
SNIP1-203ENST00000493916 TRGV2A0A075B6R0 118 aa15.82■□□□□ 0.12
SNIP1-203ENST00000493916 NUDT3O95989 172 aa15.82■□□□□ 0.12
SNIP1-203ENST00000493916 SUMO1P63165 101 aaKnown RBP15.82■□□□□ 0.12
SNIP1-203ENST00000493916 OR5I1Q13606 314 aa15.82■□□□□ 0.12
SNIP1-203ENST00000493916 TDRG1Q3Y452 100 aa15.82■□□□□ 0.12
SNIP1-203ENST00000493916 FAM159AQ6UWV7 190 aa15.82■□□□□ 0.12
SNIP1-203ENST00000493916 EPDR1Q9UM22 224 aa15.82■□□□□ 0.12
SNIP1-203ENST00000493916 TRAV26-1A0A087WT03 109 aa15.81■□□□□ 0.12
SNIP1-203ENST00000493916 TRAV21A0A0B4J279 112 aa15.81■□□□□ 0.12
SNIP1-203ENST00000493916 A0A0D9SG52 128 aa15.81■□□□□ 0.12
SNIP1-203ENST00000493916 F6UZH7 168 aa15.81■□□□□ 0.12
SNIP1-203ENST00000493916 CYB561D1Q8N8Q1 229 aa15.81■□□□□ 0.12
SNIP1-203ENST00000493916 NDFIP1Q9BT67 221 aa15.81■□□□□ 0.12
SNIP1-203ENST00000493916 DNAH2Q9P225 4427 aa15.8■□□□□ 0.12
SNIP1-203ENST00000493916 TRGV11A0A075B6L2 103 aa15.8■□□□□ 0.12
SNIP1-203ENST00000493916 FBLL1A6NHQ2 334 aaKnown RBP15.8■□□□□ 0.12
SNIP1-203ENST00000493916 H3BNG1 76 aa15.8■□□□□ 0.12
SNIP1-203ENST00000493916 IGLV2-11P01706 119 aa15.8■□□□□ 0.12
SNIP1-203ENST00000493916 TMEM75Q8N9X5 138 aa15.8■□□□□ 0.12
SNIP1-203ENST00000493916 ATG101Q9BSB4 218 aa15.8■□□□□ 0.12
SNIP1-203ENST00000493916 MAP1LC3B2A6NCE7 125 aa15.79■□□□□ 0.12
SNIP1-203ENST00000493916 BCL2L11O43521 198 aa15.79■□□□□ 0.12
SNIP1-203ENST00000493916 FGF8P55075 233 aaPredicted RBP15.79■□□□□ 0.12
SNIP1-203ENST00000493916 TMEM183BQ1AE95 376 aa15.79■□□□□ 0.12
SNIP1-203ENST00000493916 TMEM183AQ8IXX5 376 aa15.79■□□□□ 0.12
SNIP1-203ENST00000493916 SGK494Q96LW2 274 aa15.79■□□□□ 0.12
SNIP1-203ENST00000493916 MAP1LC3BQ9GZQ8 125 aa15.79■□□□□ 0.12
SNIP1-203ENST00000493916 MRPL16Q9NX20 251 aaKnown RBP15.79■□□□□ 0.12
SNIP1-203ENST00000493916 MDFICQ9P1T7 246 aa15.79■□□□□ 0.12
SNIP1-203ENST00000493916 PSG8Q9UQ74 426 aa15.79■□□□□ 0.12
SNIP1-203ENST00000493916 KANTRA0A1W2PQU2 76 aa15.78■□□□□ 0.12
SNIP1-203ENST00000493916 SEC11BP0C7V7 166 aa15.78■□□□□ 0.12
SNIP1-203ENST00000493916 NKX6-2Q9C056 277 aaPredicted RBP15.78■□□□□ 0.12
SNIP1-203ENST00000493916 NAGKQ9UJ70 344 aa15.78■□□□□ 0.12
SNIP1-203ENST00000493916 A0A0J9YY99 117 aa15.77■□□□□ 0.12
SNIP1-203ENST00000493916 FAM74A7A6NL05 159 aa15.77■□□□□ 0.12
SNIP1-203ENST00000493916 FLI1Q01543 452 aaPredicted RBP15.77■□□□□ 0.12
SNIP1-203ENST00000493916 SPXQ9BT56 116 aa15.77■□□□□ 0.12
SNIP1-203ENST00000493916 HECTD4Q9Y4D8 3996 aa15.77■□□□□ 0.11
SNIP1-203ENST00000493916 CCL18P55774 89 aa15.76■□□□□ 0.11
SNIP1-203ENST00000493916 UBE2G2P60604 165 aa15.76■□□□□ 0.11
SNIP1-203ENST00000493916 ZNF471Q9BX82 626 aaPredicted RBP15.76■□□□□ 0.11
SNIP1-203ENST00000493916 UMAD1C9J7I0 102 aa15.75■□□□□ 0.11
SNIP1-203ENST00000493916 Q6ZR54 194 aa15.75■□□□□ 0.11
SNIP1-203ENST00000493916 KCNS1Q96KK3 526 aa15.75■□□□□ 0.11
SNIP1-203ENST00000493916 C8orf49Q96NF6 230 aa15.75■□□□□ 0.11
SNIP1-203ENST00000493916 SDF2L1Q9HCN8 221 aa15.75■□□□□ 0.11
SNIP1-203ENST00000493916 NACAE9PAV3 2078 aa15.74■□□□□ 0.11
SNIP1-203ENST00000493916 IGLV2-18A0A075B6J9 118 aa15.74■□□□□ 0.11
SNIP1-203ENST00000493916 IGHV3-16A0A0C4DH30 117 aa15.74■□□□□ 0.11
SNIP1-203ENST00000493916 M0R2N4 97 aa15.74■□□□□ 0.11
SNIP1-203ENST00000493916 PEX7O00628 323 aa15.74■□□□□ 0.11
SNIP1-203ENST00000493916 IFNA7P01567 189 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms