RNA–Protein interactions for RNA: ENST00000493864.1

TRA2B-216, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-216ENST00000493864 RPUSD4Q96CM3 377 aaKnown RBP4.85□□□□□ -1.63
TRA2B-216ENST00000493864 ZNF479Q96JC4 524 aa4.85□□□□□ -1.63
TRA2B-216ENST00000493864 LINC00479Q96M42 142 aa4.85□□□□□ -1.63
TRA2B-216ENST00000493864 SLC50A1Q9BRV3 221 aa4.85□□□□□ -1.63
TRA2B-216ENST00000493864 MCRIP2Q9BUT9 160 aaKnown RBP4.85□□□□□ -1.63
TRA2B-216ENST00000493864 NKX6-2Q9C056 277 aaPredicted RBP4.85□□□□□ -1.63
TRA2B-216ENST00000493864 RPH3ALQ9UNE2 315 aa4.85□□□□□ -1.63
TRA2B-216ENST00000493864 PRELID1Q9Y255 219 aa4.85□□□□□ -1.63
TRA2B-216ENST00000493864 IGKV2-40A0A087WW87 121 aaPredicted RBP4.84□□□□□ -1.63
TRA2B-216ENST00000493864 TRAV34A0A0B4J273 112 aa4.84□□□□□ -1.63
TRA2B-216ENST00000493864 F6UB75 175 aa4.84□□□□□ -1.63
TRA2B-216ENST00000493864 F6UZH7 168 aa4.84□□□□□ -1.63
TRA2B-216ENST00000493864 PEX7O00628 323 aa4.84□□□□□ -1.63
TRA2B-216ENST00000493864 PDE6DO43924 150 aa4.84□□□□□ -1.63
TRA2B-216ENST00000493864 IGKV2D-40P01614 121 aaPredicted RBP4.84□□□□□ -1.63
TRA2B-216ENST00000493864 CD7P09564 240 aa4.84□□□□□ -1.63
TRA2B-216ENST00000493864 CSN1S1P47710 185 aa4.84□□□□□ -1.63
TRA2B-216ENST00000493864 CEBPGP53567 150 aa4.84□□□□□ -1.63
TRA2B-216ENST00000493864 DEFB131AP59861 70 aa4.84□□□□□ -1.63
TRA2B-216ENST00000493864 NANOS2P60321 138 aaKnown RBP4.84□□□□□ -1.63
TRA2B-216ENST00000493864 ERCC8Q13216 396 aa4.84□□□□□ -1.63
TRA2B-216ENST00000493864 NDUFA5Q16718 116 aa4.84□□□□□ -1.63
TRA2B-216ENST00000493864 SAMD13Q5VXD3 122 aa4.84□□□□□ -1.63
TRA2B-216ENST00000493864 GOLT1AQ6ZVE7 132 aa4.84□□□□□ -1.63
TRA2B-216ENST00000493864 CYB561D1Q8N8Q1 229 aa4.84□□□□□ -1.63
TRA2B-216ENST00000493864 C5orf17Q8NAS9 161 aa4.84□□□□□ -1.63
TRA2B-216ENST00000493864 ZNF738Q8NE65 137 aa4.84□□□□□ -1.63
TRA2B-216ENST00000493864 SGK494Q96LW2 274 aa4.84□□□□□ -1.63
TRA2B-216ENST00000493864 SPAG8Q99932 426 aaPredicted RBP4.84□□□□□ -1.63
TRA2B-216ENST00000493864 VGLL1Q99990 258 aa4.84□□□□□ -1.63
TRA2B-216ENST00000493864 TXNDC17Q9BRA2 123 aa4.84□□□□□ -1.63
TRA2B-216ENST00000493864 DERL1Q9BUN8 251 aa4.84□□□□□ -1.63
TRA2B-216ENST00000493864 SLC35B3Q9H1N7 401 aa4.84□□□□□ -1.63
TRA2B-216ENST00000493864 CLEC5AQ9NY25 188 aa4.84□□□□□ -1.63
TRA2B-216ENST00000493864 TRAV8-1A0A0A6YYK1 113 aa4.83□□□□□ -1.64
TRA2B-216ENST00000493864 hDV102S1A0JD36 115 aa4.83□□□□□ -1.64
TRA2B-216ENST00000493864 TMEM218A2RU14 115 aa4.83□□□□□ -1.64
TRA2B-216ENST00000493864 KNCNA6PVL3 124 aa4.83□□□□□ -1.64
TRA2B-216ENST00000493864 TMEM250H0YL14 139 aa4.83□□□□□ -1.64
TRA2B-216ENST00000493864 TCRAP04437 139 aa4.83□□□□□ -1.64
TRA2B-216ENST00000493864 KRTAP10-11P60412 298 aa4.83□□□□□ -1.64
TRA2B-216ENST00000493864 SNRPD3P62318 126 aaKnown RBP4.83□□□□□ -1.64
TRA2B-216ENST00000493864 GDF5OSQ5U4N7 250 aa4.83□□□□□ -1.64
TRA2B-216ENST00000493864 UQCC3Q6UW78 93 aa4.83□□□□□ -1.64
TRA2B-216ENST00000493864 APRG1Q8IVJ8 170 aa4.83□□□□□ -1.64
TRA2B-216ENST00000493864 ARL6IP6Q8N6S5 226 aa4.83□□□□□ -1.64
TRA2B-216ENST00000493864 OR8A1Q8NGG7 326 aa4.83□□□□□ -1.64
TRA2B-216ENST00000493864 HIST1H2BAQ96A08 127 aa4.83□□□□□ -1.64
TRA2B-216ENST00000493864 C11orf52Q96A22 123 aa4.83□□□□□ -1.64
TRA2B-216ENST00000493864 MRPL53Q96EL3 112 aaKnown RBP4.83□□□□□ -1.64
TRA2B-216ENST00000493864 ASCL2Q99929 193 aa4.83□□□□□ -1.64
TRA2B-216ENST00000493864 AGPAT4-IT1Q9H0P7 198 aa4.83□□□□□ -1.64
TRA2B-216ENST00000493864 SMDT1Q9H4I9 107 aa4.83□□□□□ -1.64
TRA2B-216ENST00000493864 KLF12Q9Y4X4 402 aa4.83□□□□□ -1.64
TRA2B-216ENST00000493864 A0A0J9YX75 114 aa4.82□□□□□ -1.64
TRA2B-216ENST00000493864 PGPEP1LA6NFU8 196 aa4.82□□□□□ -1.64
TRA2B-216ENST00000493864 G3V4G9 280 aa4.82□□□□□ -1.64
TRA2B-216ENST00000493864 NDUFS6O75380 124 aaKnown RBP4.82□□□□□ -1.64
TRA2B-216ENST00000493864 IGKV3-20P01619 116 aa4.82□□□□□ -1.64
TRA2B-216ENST00000493864 IGLV2-11P01706 119 aa4.82□□□□□ -1.64
TRA2B-216ENST00000493864 SFTA3P0C7M3 94 aa4.82□□□□□ -1.64
TRA2B-216ENST00000493864 CT45A10P0DMU9 189 aa4.82□□□□□ -1.64
TRA2B-216ENST00000493864 AKR1C3P42330 323 aa4.82□□□□□ -1.64
TRA2B-216ENST00000493864 RPL35P42766 123 aaKnown RBP4.82□□□□□ -1.64
TRA2B-216ENST00000493864 CNN1P51911 297 aaKnown RBP4.82□□□□□ -1.64
TRA2B-216ENST00000493864 CMC4P56277 68 aaPredicted RBP4.82□□□□□ -1.64
TRA2B-216ENST00000493864 HIST1H1AQ02539 215 aaPredicted RBP4.82□□□□□ -1.64
TRA2B-216ENST00000493864 ZNF674Q2M3X9 581 aa4.82□□□□□ -1.64
TRA2B-216ENST00000493864 SOHLH1Q5JUK2 328 aa4.82□□□□□ -1.64
TRA2B-216ENST00000493864 OR10J6PQ8NGY7 276 aa4.82□□□□□ -1.64
TRA2B-216ENST00000493864 TVP23CQ96ET8 276 aa4.82□□□□□ -1.64
TRA2B-216ENST00000493864 FAM110AQ9BQ89 295 aa4.82□□□□□ -1.64
TRA2B-216ENST00000493864 TCEAL7Q9BRU2 100 aa4.82□□□□□ -1.64
TRA2B-216ENST00000493864 ATG101Q9BSB4 218 aa4.82□□□□□ -1.64
TRA2B-216ENST00000493864 GPR61Q9BZJ8 451 aa4.82□□□□□ -1.64
TRA2B-216ENST00000493864 WFDC10AQ9H1F0 79 aa4.82□□□□□ -1.64
TRA2B-216ENST00000493864 PARLQ9H300 379 aa4.82□□□□□ -1.64
TRA2B-216ENST00000493864 PSG8Q9UQ74 426 aa4.82□□□□□ -1.64
TRA2B-216ENST00000493864 TRBV20OR9-2A0A075B6H5 130 aa4.81□□□□□ -1.64
TRA2B-216ENST00000493864 IGLV5-52A0A0A0MRZ9 124 aa4.81□□□□□ -1.64
TRA2B-216ENST00000493864 RBAKDNA6NC62 111 aa4.81□□□□□ -1.64
TRA2B-216ENST00000493864 ZNF727A8MUV8 499 aa4.81□□□□□ -1.64
TRA2B-216ENST00000493864 OR11H12B2RN74 326 aa4.81□□□□□ -1.64
TRA2B-216ENST00000493864 K7EQM0 130 aa4.81□□□□□ -1.64
TRA2B-216ENST00000493864 S100A9P06702 114 aaKnown RBP4.81□□□□□ -1.64
TRA2B-216ENST00000493864 ZNF138P52744 262 aa4.81□□□□□ -1.64
TRA2B-216ENST00000493864 TAS2R60P59551 318 aa4.81□□□□□ -1.64
TRA2B-216ENST00000493864 FLI1Q01543 452 aaPredicted RBP4.81□□□□□ -1.64
TRA2B-216ENST00000493864 TMEM183BQ1AE95 376 aa4.81□□□□□ -1.64
TRA2B-216ENST00000493864 ACTL10Q5JWF8 245 aa4.81□□□□□ -1.64
TRA2B-216ENST00000493864 EBLN2Q6P2I7 272 aa4.81□□□□□ -1.64
TRA2B-216ENST00000493864 FOXI2Q6ZQN5 318 aa4.81□□□□□ -1.64
TRA2B-216ENST00000493864 PRNTQ86SH4 94 aa4.81□□□□□ -1.64
TRA2B-216ENST00000493864 DEFB125Q8N687 156 aa4.81□□□□□ -1.64
TRA2B-216ENST00000493864 Q8TAT8 98 aa4.81□□□□□ -1.64
TRA2B-216ENST00000493864 LINC00477Q96M19 166 aa4.81□□□□□ -1.64
TRA2B-216ENST00000493864 SMIM7Q9BQ49 75 aa4.81□□□□□ -1.64
TRA2B-216ENST00000493864 SAV1Q9H4B6 383 aaPredicted RBP4.81□□□□□ -1.64
TRA2B-216ENST00000493864 TRBV6-1A0A0K0K1D8 114 aa4.8□□□□□ -1.64
TRA2B-216ENST00000493864 SERTM2A0A1B0GWG4 89 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms