RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 CYB561D1Q8N8Q1 229 aa8.94□□□□□ -0.98
UPF3A-210ENST00000493727 MED9Q9NWA0 146 aa8.94□□□□□ -0.98
UPF3A-210ENST00000493727 PCLOQ9Y6V0 5065 aa8.93□□□□□ -0.98
UPF3A-210ENST00000493727 KNCNA6PVL3 124 aa8.93□□□□□ -0.98
UPF3A-210ENST00000493727 PRAC2D3DTV9 90 aa8.93□□□□□ -0.98
UPF3A-210ENST00000493727 F6UB75 175 aa8.93□□□□□ -0.98
UPF3A-210ENST00000493727 DEFB1P60022 68 aa8.93□□□□□ -0.98
UPF3A-210ENST00000493727 UBE2G1P62253 170 aa8.93□□□□□ -0.98
UPF3A-210ENST00000493727 ACTL10Q5JWF8 245 aa8.93□□□□□ -0.98
UPF3A-210ENST00000493727 TMEM78Q5T7P6 136 aa8.93□□□□□ -0.98
UPF3A-210ENST00000493727 STHQ8IWL8 128 aa8.93□□□□□ -0.98
UPF3A-210ENST00000493727 OR8A1Q8NGG7 326 aa8.93□□□□□ -0.98
UPF3A-210ENST00000493727 KRTAP4-9Q9BYQ8 210 aa8.93□□□□□ -0.98
UPF3A-210ENST00000493727 SRD5A3Q9H8P0 318 aa8.93□□□□□ -0.98
UPF3A-210ENST00000493727 PPP1R14DQ9NXH3 145 aa8.93□□□□□ -0.98
UPF3A-210ENST00000493727 TMEM250H0YL14 139 aa8.92□□□□□ -0.98
UPF3A-210ENST00000493727 DUSP14O95147 198 aaKnown RBP8.92□□□□□ -0.98
UPF3A-210ENST00000493727 ZNF705DP0CH99 300 aaPredicted RBP8.92□□□□□ -0.98
UPF3A-210ENST00000493727 ZNF705BP0CI00 300 aaPredicted RBP8.92□□□□□ -0.98
UPF3A-210ENST00000493727 ERCC8Q13216 396 aa8.92□□□□□ -0.98
UPF3A-210ENST00000493727 ZNF674Q2M3X9 581 aa8.92□□□□□ -0.98
UPF3A-210ENST00000493727 DEFB125Q8N687 156 aa8.92□□□□□ -0.98
UPF3A-210ENST00000493727 OR4B1Q8NGF8 309 aa8.92□□□□□ -0.98
UPF3A-210ENST00000493727 C11orf52Q96A22 123 aa8.92□□□□□ -0.98
UPF3A-210ENST00000493727 WFDC10AQ9H1F0 79 aa8.92□□□□□ -0.98
UPF3A-210ENST00000493727 SAV1Q9H4B6 383 aaPredicted RBP8.92□□□□□ -0.98
UPF3A-210ENST00000493727 SMDT1Q9H4I9 107 aa8.92□□□□□ -0.98
UPF3A-210ENST00000493727 HECTD4Q9Y4D8 3996 aa8.91□□□□□ -0.98
UPF3A-210ENST00000493727 TRAV34A0A0B4J273 112 aa8.91□□□□□ -0.98
UPF3A-210ENST00000493727 A0A0J9YX75 114 aa8.91□□□□□ -0.98
UPF3A-210ENST00000493727 RBAKDNA6NC62 111 aa8.91□□□□□ -0.98
UPF3A-210ENST00000493727 RBMY1BA6NDE4 496 aaKnown RBP8.91□□□□□ -0.98
UPF3A-210ENST00000493727 RBMY1EA6NEQ0 496 aaKnown RBP8.91□□□□□ -0.98
UPF3A-210ENST00000493727 IGKV3-20P01619 116 aa8.91□□□□□ -0.98
UPF3A-210ENST00000493727 SRP19P09132 144 aaKnown RBP8.91□□□□□ -0.98
UPF3A-210ENST00000493727 RBMY1DP0C7P1 496 aaKnown RBP8.91□□□□□ -0.98
UPF3A-210ENST00000493727 HLA-DRB4P13762 266 aa8.91□□□□□ -0.98
UPF3A-210ENST00000493727 NDUFA5Q16718 116 aa8.91□□□□□ -0.98
UPF3A-210ENST00000493727 GDF5OSQ5U4N7 250 aa8.91□□□□□ -0.98
UPF3A-210ENST00000493727 UQCC3Q6UW78 93 aa8.91□□□□□ -0.98
UPF3A-210ENST00000493727 TMEM75Q8N9X5 138 aa8.91□□□□□ -0.98
UPF3A-210ENST00000493727 FMC1Q96HJ9 113 aa8.91□□□□□ -0.98
UPF3A-210ENST00000493727 SGK494Q96LW2 274 aa8.91□□□□□ -0.98
UPF3A-210ENST00000493727 VGLL1Q99990 258 aa8.91□□□□□ -0.98
UPF3A-210ENST00000493727 NDFIP1Q9BT67 221 aa8.91□□□□□ -0.98
UPF3A-210ENST00000493727 SLC35B3Q9H1N7 401 aa8.91□□□□□ -0.98
UPF3A-210ENST00000493727 HLA-DRB4X5D2U9 266 aa8.91□□□□□ -0.98
UPF3A-210ENST00000493727 TRAV8-1A0A0A6YYK1 113 aa8.9□□□□□ -0.98
UPF3A-210ENST00000493727 FBLL1A6NHQ2 334 aaKnown RBP8.9□□□□□ -0.98
UPF3A-210ENST00000493727 NDUFS6O75380 124 aaKnown RBP8.9□□□□□ -0.98
UPF3A-210ENST00000493727 S100A9P06702 114 aaKnown RBP8.9□□□□□ -0.98
UPF3A-210ENST00000493727 GYPEP15421 78 aa8.9□□□□□ -0.98
UPF3A-210ENST00000493727 RPL35P42766 123 aaKnown RBP8.9□□□□□ -0.98
UPF3A-210ENST00000493727 FLI1Q01543 452 aaPredicted RBP8.9□□□□□ -0.98
UPF3A-210ENST00000493727 PRNTQ86SH4 94 aa8.9□□□□□ -0.98
UPF3A-210ENST00000493727 Q8TAT8 98 aa8.9□□□□□ -0.98
UPF3A-210ENST00000493727 C2CD4CQ8TF44 421 aa8.9□□□□□ -0.98
UPF3A-210ENST00000493727 LINC00479Q96M42 142 aa8.9□□□□□ -0.98
UPF3A-210ENST00000493727 RETNQ9HD89 108 aa8.9□□□□□ -0.98
UPF3A-210ENST00000493727 RYR1P21817 5038 aa8.9□□□□□ -0.99
UPF3A-210ENST00000493727 C9JQL5 133 aa8.89□□□□□ -0.99
UPF3A-210ENST00000493727 H3BMM0 161 aa8.89□□□□□ -0.99
UPF3A-210ENST00000493727 SFTA3P0C7M3 94 aa8.89□□□□□ -0.99
UPF3A-210ENST00000493727 ZNF138P52744 262 aa8.89□□□□□ -0.99
UPF3A-210ENST00000493727 TMEM183BQ1AE95 376 aa8.89□□□□□ -0.99
UPF3A-210ENST00000493727 C9orf47Q6ZRZ4 202 aa8.89□□□□□ -0.99
UPF3A-210ENST00000493727 Q86TA4 180 aa8.89□□□□□ -0.99
UPF3A-210ENST00000493727 LINC00477Q96M19 166 aa8.89□□□□□ -0.99
UPF3A-210ENST00000493727 SMIM7Q9BQ49 75 aa8.89□□□□□ -0.99
UPF3A-210ENST00000493727 DERL1Q9BUN8 251 aa8.89□□□□□ -0.99
UPF3A-210ENST00000493727 AGPAT4-IT1Q9H0P7 198 aa8.89□□□□□ -0.99
UPF3A-210ENST00000493727 PARLQ9H300 379 aa8.89□□□□□ -0.99
UPF3A-210ENST00000493727 PSG8Q9UQ74 426 aa8.89□□□□□ -0.99
UPF3A-210ENST00000493727 LOC102724200A0A096LPH7 203 aaPredicted RBP8.88□□□□□ -0.99
UPF3A-210ENST00000493727 KRTAP23-1A1A580 65 aa8.88□□□□□ -0.99
UPF3A-210ENST00000493727 ZNF727A8MUV8 499 aa8.88□□□□□ -0.99
UPF3A-210ENST00000493727 RPL35AP18077 110 aaKnown RBP8.88□□□□□ -0.99
UPF3A-210ENST00000493727 GNG4P50150 75 aa8.88□□□□□ -0.99
UPF3A-210ENST00000493727 TAS2R60P59551 318 aa8.88□□□□□ -0.99
UPF3A-210ENST00000493727 CENPWQ5EE01 88 aa8.88□□□□□ -0.99
UPF3A-210ENST00000493727 SOHLH1Q5JUK2 328 aa8.88□□□□□ -0.99
UPF3A-210ENST00000493727 EIF4E3Q8N5X7 224 aaKnown RBP8.88□□□□□ -0.99
UPF3A-210ENST00000493727 ZNF492Q9P255 531 aa8.88□□□□□ -0.99
UPF3A-210ENST00000493727 VPS13DQ5THJ4 4388 aa8.88□□□□□ -0.99
UPF3A-210ENST00000493727 CT45A10P0DMU9 189 aa8.87□□□□□ -0.99
UPF3A-210ENST00000493727 TSPOP30536 169 aa8.87□□□□□ -0.99
UPF3A-210ENST00000493727 LEPP41159 167 aa8.87□□□□□ -0.99
UPF3A-210ENST00000493727 BAGE2Q86Y30 109 aa8.87□□□□□ -0.99
UPF3A-210ENST00000493727 DNAH6Q9C0G6 4158 aa8.87□□□□□ -0.99
UPF3A-210ENST00000493727 KIAA1109Q2LD37 5005 aa8.86□□□□□ -0.99
UPF3A-210ENST00000493727 J3KRW8 73 aa8.86□□□□□ -0.99
UPF3A-210ENST00000493727 IGLV2-11P01706 119 aa8.86□□□□□ -0.99
UPF3A-210ENST00000493727 FXYD7P58549 80 aa8.86□□□□□ -0.99
UPF3A-210ENST00000493727 NUTF2P61970 127 aaKnown RBP8.86□□□□□ -0.99
UPF3A-210ENST00000493727 FAM74A3Q4VXF1 159 aa8.86□□□□□ -0.99
UPF3A-210ENST00000493727 SAPCD1Q5SSQ6 148 aa8.86□□□□□ -0.99
UPF3A-210ENST00000493727 LCE5AQ5TCM9 118 aa8.86□□□□□ -0.99
UPF3A-210ENST00000493727 TRPT1Q86TN4 253 aaKnown RBP8.86□□□□□ -0.99
UPF3A-210ENST00000493727 SLC7A5P1Q8MH63 180 aa8.86□□□□□ -0.99
UPF3A-210ENST00000493727 NHLRC2Q8NBF2 726 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms