RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-206ENST00000493232 ADAMTSL5Q6ZMM2 481 aa12.9□□□□□ -0.34
BRAT1-206ENST00000493232 ZNF491Q8N8L2 437 aa12.9□□□□□ -0.34
BRAT1-206ENST00000493232 ZNF124Q15973 351 aa12.9□□□□□ -0.34
BRAT1-206ENST00000493232 TRAV26-2A0A0B4J265 109 aa12.9□□□□□ -0.34
BRAT1-206ENST00000493232 IGHV3-38A0A0C4DH36 116 aa12.9□□□□□ -0.34
BRAT1-206ENST00000493232 KLF5Q13887 457 aaPredicted RBP12.9□□□□□ -0.34
BRAT1-206ENST00000493232 RHOHQ15669 191 aa12.9□□□□□ -0.34
BRAT1-206ENST00000493232 ZNF524Q96C55 264 aa12.9□□□□□ -0.34
BRAT1-206ENST00000493232 POLR3KQ9Y2Y1 108 aaPredicted RBP12.9□□□□□ -0.34
BRAT1-206ENST00000493232 PKDREJQ9NTG1 2253 aa12.9□□□□□ -0.34
BRAT1-206ENST00000493232 IGHV1-24A0A0C4DH33 117 aa12.9□□□□□ -0.34
BRAT1-206ENST00000493232 NDUFS6O75380 124 aaKnown RBP12.89□□□□□ -0.35
BRAT1-206ENST00000493232 UBE2WQ96B02 151 aa12.89□□□□□ -0.35
BRAT1-206ENST00000493232 ZMAT4Q9H898 229 aa12.89□□□□□ -0.35
BRAT1-206ENST00000493232 LENEPQ9Y5L5 61 aa12.89□□□□□ -0.35
BRAT1-206ENST00000493232 MGAMO43451 1857 aa12.89□□□□□ -0.35
BRAT1-206ENST00000493232 USF3Q68DE3 2245 aa12.89□□□□□ -0.35
BRAT1-206ENST00000493232 PRR20EP86478 221 aa12.89□□□□□ -0.35
BRAT1-206ENST00000493232 PRR20CP86479 221 aa12.89□□□□□ -0.35
BRAT1-206ENST00000493232 PRR20DP86480 221 aa12.89□□□□□ -0.35
BRAT1-206ENST00000493232 PRR20BP86481 221 aa12.89□□□□□ -0.35
BRAT1-206ENST00000493232 PRR20AP86496 221 aa12.89□□□□□ -0.35
BRAT1-206ENST00000493232 PLXNA4Q9HCM2 1894 aa12.89□□□□□ -0.35
BRAT1-206ENST00000493232 Q8NFD4 153 aa12.89□□□□□ -0.35
BRAT1-206ENST00000493232 SIGLEC8Q9NYZ4 499 aa12.89□□□□□ -0.35
BRAT1-206ENST00000493232 COX11Q9Y6N1 276 aa12.89□□□□□ -0.35
BRAT1-206ENST00000493232 FANCMQ8IYD8 2048 aa12.89□□□□□ -0.35
BRAT1-206ENST00000493232 DEFB112Q30KQ8 113 aa12.89□□□□□ -0.35
BRAT1-206ENST00000493232 HOXD3P31249 432 aaPredicted RBP12.88□□□□□ -0.35
BRAT1-206ENST00000493232 RBAKDNA6NC62 111 aa12.88□□□□□ -0.35
BRAT1-206ENST00000493232 F8VRH5 84 aa12.88□□□□□ -0.35
BRAT1-206ENST00000493232 IGF2-ASQ6U949 168 aa12.88□□□□□ -0.35
BRAT1-206ENST00000493232 IGF2BP2-AS1Q96M15 143 aa12.88□□□□□ -0.35
BRAT1-206ENST00000493232 NPYP01303 97 aa12.87□□□□□ -0.35
BRAT1-206ENST00000493232 IGFL2Q6UWQ7 119 aa12.87□□□□□ -0.35
BRAT1-206ENST00000493232 LTAP01374 205 aa12.87□□□□□ -0.35
BRAT1-206ENST00000493232 IGLC7A0M8Q6 106 aa12.87□□□□□ -0.35
BRAT1-206ENST00000493232 CADP27708 2225 aa12.87□□□□□ -0.35
BRAT1-206ENST00000493232 TRAV13-2A0A0B4J235 113 aa12.87□□□□□ -0.35
BRAT1-206ENST00000493232 ANGP03950 147 aaKnown RBP12.87□□□□□ -0.35
BRAT1-206ENST00000493232 TCF15Q12870 199 aa12.87□□□□□ -0.35
BRAT1-206ENST00000493232 CTSZQ9UBR2 303 aa12.87□□□□□ -0.35
BRAT1-206ENST00000493232 PRSS29PA6NIE9 313 aa12.86□□□□□ -0.35
BRAT1-206ENST00000493232 NXPH4O95158 308 aa12.86□□□□□ -0.35
BRAT1-206ENST00000493232 IGHV4-59P01825 116 aa12.86□□□□□ -0.35
BRAT1-206ENST00000493232 CGB3P0DN86 165 aa12.86□□□□□ -0.35
BRAT1-206ENST00000493232 Q71RC1 249 aaPredicted RBP12.86□□□□□ -0.35
BRAT1-206ENST00000493232 K7EMI3 77 aa12.86□□□□□ -0.35
BRAT1-206ENST00000493232 TAL2Q16559 108 aa12.86□□□□□ -0.35
BRAT1-206ENST00000493232 EDA2RQ9HAV5 297 aa12.86□□□□□ -0.35
BRAT1-206ENST00000493232 ZNF493Q6ZR52 646 aa12.85□□□□□ -0.35
BRAT1-206ENST00000493232 YLPM1P49750 1951 aaKnown RBP12.85□□□□□ -0.35
BRAT1-206ENST00000493232 FOXE3Q13461 319 aa12.85□□□□□ -0.35
BRAT1-206ENST00000493232 MRPL35Q9NZE8 188 aaKnown RBP12.85□□□□□ -0.35
BRAT1-206ENST00000493232 ARFGEF3Q5TH69 2177 aa12.85□□□□□ -0.35
BRAT1-206ENST00000493232 A0A1B0GUS0 222 aa12.85□□□□□ -0.35
BRAT1-206ENST00000493232 COX8AP10176 69 aa12.85□□□□□ -0.35
BRAT1-206ENST00000493232 UTF1Q5T230 341 aa12.85□□□□□ -0.35
BRAT1-206ENST00000493232 UBL5Q9BZL1 73 aa12.85□□□□□ -0.35
BRAT1-206ENST00000493232 SCRT2Q9NQ03 307 aa12.85□□□□□ -0.35
BRAT1-206ENST00000493232 SPANXA1Q9NS26 97 aa12.85□□□□□ -0.35
BRAT1-206ENST00000493232 PTPRDP23468 1912 aa12.85□□□□□ -0.35
BRAT1-206ENST00000493232 RSPO3Q9BXY4 272 aaPredicted RBP12.85□□□□□ -0.35
BRAT1-206ENST00000493232 WDR81Q562E7 1941 aa12.85□□□□□ -0.35
BRAT1-206ENST00000493232 CENPVL3A0A0U1RRI6 287 aa12.84□□□□□ -0.35
BRAT1-206ENST00000493232 CCL24O00175 119 aa12.84□□□□□ -0.35
BRAT1-206ENST00000493232 SPINK8P0C7L1 97 aa12.84□□□□□ -0.35
BRAT1-206ENST00000493232 DEFB113Q30KQ7 82 aa12.84□□□□□ -0.35
BRAT1-206ENST00000493232 C11orf53Q8IXP5 236 aa12.84□□□□□ -0.35
BRAT1-206ENST00000493232 RNF152Q8N8N0 203 aa12.84□□□□□ -0.35
BRAT1-206ENST00000493232 PKIGQ9Y2B9 76 aa12.84□□□□□ -0.35
BRAT1-206ENST00000493232 C9orf118A6NHY6 69 aa12.83□□□□□ -0.36
BRAT1-206ENST00000493232 J3QQQ9 107 aa12.83□□□□□ -0.36
BRAT1-206ENST00000493232 GTSF1LQ9H1H1 148 aa12.83□□□□□ -0.36
BRAT1-206ENST00000493232 IGLC2P0DOY2 106 aa12.83□□□□□ -0.36
BRAT1-206ENST00000493232 IGLC3P0DOY3 106 aa12.83□□□□□ -0.36
BRAT1-206ENST00000493232 SPANXDQ9BXN6 97 aa12.83□□□□□ -0.36
BRAT1-206ENST00000493232 TEX48A0A1B0GUV7 120 aa12.83□□□□□ -0.36
BRAT1-206ENST00000493232 CRLF1O75462 422 aa12.83□□□□□ -0.36
BRAT1-206ENST00000493232 C10orf91Q5T1B1 145 aa12.83□□□□□ -0.36
BRAT1-206ENST00000493232 PRO1854Q9UHT4 67 aa12.83□□□□□ -0.36
BRAT1-206ENST00000493232 BOD1L2Q8IYS8 172 aa12.82□□□□□ -0.36
BRAT1-206ENST00000493232 ZNF407Q9C0G0 2248 aa12.82□□□□□ -0.36
BRAT1-206ENST00000493232 AGPAT4-IT1Q9H0P7 198 aa12.82□□□□□ -0.36
BRAT1-206ENST00000493232 KIAA1671Q9BY89 1806 aa12.82□□□□□ -0.36
BRAT1-206ENST00000493232 DYNAPQ8N1N2 210 aa12.82□□□□□ -0.36
BRAT1-206ENST00000493232 NPBQ8NG41 125 aa12.82□□□□□ -0.36
BRAT1-206ENST00000493232 PPDPFLQ8WWR9 84 aa12.82□□□□□ -0.36
BRAT1-206ENST00000493232 FGF6P10767 208 aa12.82□□□□□ -0.36
BRAT1-206ENST00000493232 C9orf66Q5T8R8 295 aa12.82□□□□□ -0.36
BRAT1-206ENST00000493232 KLF2Q9Y5W3 355 aaPredicted RBP12.82□□□□□ -0.36
BRAT1-206ENST00000493232 WNK2Q9Y3S1 2297 aa12.82□□□□□ -0.36
BRAT1-206ENST00000493232 SPTAN1Q13813 2472 aaKnown RBP12.82□□□□□ -0.36
BRAT1-206ENST00000493232 LHBP01229 141 aa12.82□□□□□ -0.36
BRAT1-206ENST00000493232 DOCK7Q96N67 2140 aa12.82□□□□□ -0.36
BRAT1-206ENST00000493232 NDUFS7O75251 213 aa12.81□□□□□ -0.36
BRAT1-206ENST00000493232 CGB7P0DN87 165 aa12.81□□□□□ -0.36
BRAT1-206ENST00000493232 Q6ZWC4 215 aa12.81□□□□□ -0.36
BRAT1-206ENST00000493232 U3KQE9 123 aa12.81□□□□□ -0.36
BRAT1-206ENST00000493232 SUMO4Q6EEV6 95 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms