RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 LENEPQ9Y5L5 61 aa9.83□□□□□ -0.84
MSH6-208ENST00000493177 TRAV12-2A0A075B6T6 113 aa9.82□□□□□ -0.84
MSH6-208ENST00000493177 CA1P00915 261 aaPredicted RBP9.82□□□□□ -0.84
MSH6-208ENST00000493177 LTAP01374 205 aa9.82□□□□□ -0.84
MSH6-208ENST00000493177 MGST1P10620 155 aaKnown RBP9.82□□□□□ -0.84
MSH6-208ENST00000493177 SMUG1Q53HV7 270 aa9.82□□□□□ -0.84
MSH6-208ENST00000493177 CASC10Q5T4H9 136 aa9.82□□□□□ -0.84
MSH6-208ENST00000493177 SLC7A5P1Q8MH63 180 aa9.82□□□□□ -0.84
MSH6-208ENST00000493177 TVP23CQ96ET8 276 aa9.82□□□□□ -0.84
MSH6-208ENST00000493177 FAM19A4Q96LR4 140 aa9.82□□□□□ -0.84
MSH6-208ENST00000493177 IGF2BP2-AS1Q96M15 143 aa9.82□□□□□ -0.84
MSH6-208ENST00000493177 CSTL1Q9H114 145 aa9.82□□□□□ -0.84
MSH6-208ENST00000493177 XCL2Q9UBD3 114 aa9.82□□□□□ -0.84
MSH6-208ENST00000493177 TRBV7-9A0A0J9YWB2 115 aa9.81□□□□□ -0.84
MSH6-208ENST00000493177 PGPEP1LA6NFU8 196 aa9.81□□□□□ -0.84
MSH6-208ENST00000493177 AMBPP02760 352 aa9.81□□□□□ -0.84
MSH6-208ENST00000493177 CRISP2P16562 243 aa9.81□□□□□ -0.84
MSH6-208ENST00000493177 RNASE4P34096 147 aaKnown RBP9.81□□□□□ -0.84
MSH6-208ENST00000493177 FAM74A3Q4VXF1 159 aa9.81□□□□□ -0.84
MSH6-208ENST00000493177 EDA2RQ9HAV5 297 aa9.81□□□□□ -0.84
MSH6-208ENST00000493177 HUWE1Q7Z6Z7 4374 aaKnown RBP9.81□□□□□ -0.84
MSH6-208ENST00000493177 TMEM218A2RU14 115 aa9.8□□□□□ -0.84
MSH6-208ENST00000493177 C9JCJ5 164 aa9.8□□□□□ -0.84
MSH6-208ENST00000493177 F8W036 122 aa9.8□□□□□ -0.84
MSH6-208ENST00000493177 GCGP01275 180 aa9.8□□□□□ -0.84
MSH6-208ENST00000493177 INSP01308 110 aa9.8□□□□□ -0.84
MSH6-208ENST00000493177 BTN1A1Q13410 526 aa9.8□□□□□ -0.84
MSH6-208ENST00000493177 KIR3DS1Q14943 382 aa9.8□□□□□ -0.84
MSH6-208ENST00000493177 PRR9Q5T870 116 aa9.8□□□□□ -0.84
MSH6-208ENST00000493177 PRR27Q6MZM9 219 aa9.8□□□□□ -0.84
MSH6-208ENST00000493177 TMEM183AQ8IXX5 376 aa9.8□□□□□ -0.84
MSH6-208ENST00000493177 ZFAND2AQ8N6M9 145 aa9.8□□□□□ -0.84
MSH6-208ENST00000493177 IL17DQ8TAD2 202 aa9.8□□□□□ -0.84
MSH6-208ENST00000493177 C1QTNF4Q9BXJ3 329 aa9.8□□□□□ -0.84
MSH6-208ENST00000493177 TRBV20OR9-2A0A075B6H5 130 aa9.79□□□□□ -0.84
MSH6-208ENST00000493177 TRAV12-3A0A0B4J271 114 aa9.79□□□□□ -0.84
MSH6-208ENST00000493177 KIR2DL5BA0A0G2JN68 375 aa9.79□□□□□ -0.84
MSH6-208ENST00000493177 KIR2DL5BA0A0G2JPC4 375 aa9.79□□□□□ -0.84
MSH6-208ENST00000493177 C7orf71A4D174 169 aa9.79□□□□□ -0.84
MSH6-208ENST00000493177 KLLNB2CW77 178 aa9.79□□□□□ -0.84
MSH6-208ENST00000493177 TMEM241Q24JQ0 296 aa9.79□□□□□ -0.84
MSH6-208ENST00000493177 GFI1BQ5VTD9 330 aa9.79□□□□□ -0.84
MSH6-208ENST00000493177 KIR2DL5AQ8N109 375 aa9.79□□□□□ -0.84
MSH6-208ENST00000493177 KIR2DL5BQ8NHK3 375 aa9.79□□□□□ -0.84
MSH6-208ENST00000493177 ZC2HC1AQ96GY0 325 aa9.79□□□□□ -0.84
MSH6-208ENST00000493177 NIPSNAP3BQ9BS92 247 aa9.79□□□□□ -0.84
MSH6-208ENST00000493177 NAT8Q9UHE5 227 aa9.79□□□□□ -0.84
MSH6-208ENST00000493177 UBE2CO00762 179 aa9.78□□□□□ -0.84
MSH6-208ENST00000493177 CRXO43186 299 aaPredicted RBP9.78□□□□□ -0.84
MSH6-208ENST00000493177 DEFB135Q30KP9 77 aa9.78□□□□□ -0.84
MSH6-208ENST00000493177 OCC1Q8TAD7 63 aa9.78□□□□□ -0.84
MSH6-208ENST00000493177 SMIM12Q96EX1 92 aa9.78□□□□□ -0.84
MSH6-208ENST00000493177 TMEM208Q9BTX3 173 aa9.78□□□□□ -0.84
MSH6-208ENST00000493177 BIN3Q9NQY0 253 aa9.78□□□□□ -0.84
MSH6-208ENST00000493177 IGHV3OR16-12A0A075B7B8 117 aa9.77□□□□□ -0.85
MSH6-208ENST00000493177 TRAV21A0A0B4J279 112 aa9.77□□□□□ -0.85
MSH6-208ENST00000493177 SPRY2O43597 315 aa9.77□□□□□ -0.85
MSH6-208ENST00000493177 IGLV2-8P01709 118 aa9.77□□□□□ -0.85
MSH6-208ENST00000493177 GIG44P09565 113 aaPredicted RBP9.77□□□□□ -0.85
MSH6-208ENST00000493177 ZNF80P51504 273 aaPredicted RBP9.77□□□□□ -0.85
MSH6-208ENST00000493177 OR5I1Q13606 314 aa9.77□□□□□ -0.85
MSH6-208ENST00000493177 ADIRFQ15847 76 aa9.77□□□□□ -0.85
MSH6-208ENST00000493177 MLST8Q9BVC4 326 aa9.77□□□□□ -0.85
MSH6-208ENST00000493177 NAGKQ9UJ70 344 aa9.77□□□□□ -0.85
MSH6-208ENST00000493177 GOLT1BQ9Y3E0 138 aa9.77□□□□□ -0.85
MSH6-208ENST00000493177 PFN1P07737 140 aaKnown RBP9.76□□□□□ -0.85
MSH6-208ENST00000493177 ADCYAP1P18509 176 aa9.76□□□□□ -0.85
MSH6-208ENST00000493177 FAM162BQ5T6X4 162 aa9.76□□□□□ -0.85
MSH6-208ENST00000493177 DAZAP1Q96EP5 407 aaKnown RBP9.76□□□□□ -0.85
MSH6-208ENST00000493177 LINC01587Q99440 93 aa9.76□□□□□ -0.85
MSH6-208ENST00000493177 OVOL2Q9BRP0 275 aa9.76□□□□□ -0.85
MSH6-208ENST00000493177 SEC11CQ9BY50 192 aa9.76□□□□□ -0.85
MSH6-208ENST00000493177 LY96Q9Y6Y9 160 aa9.76□□□□□ -0.85
MSH6-208ENST00000493177 FABP5P3A8MUU1 101 aa9.75□□□□□ -0.85
MSH6-208ENST00000493177 K7EN84 100 aa9.75□□□□□ -0.85
MSH6-208ENST00000493177 SH2D1AO60880 128 aa9.75□□□□□ -0.85
MSH6-208ENST00000493177 RBMY1A1P0DJD3 496 aaKnown RBP9.75□□□□□ -0.85
MSH6-208ENST00000493177 RBMY1CP0DJD4 496 aa9.75□□□□□ -0.85
MSH6-208ENST00000493177 HTN1P15515 57 aa9.75□□□□□ -0.85
MSH6-208ENST00000493177 RPL23P62829 140 aaKnown RBP9.75□□□□□ -0.85
MSH6-208ENST00000493177 RBMY1FQ15415 496 aaKnown RBP9.75□□□□□ -0.85
MSH6-208ENST00000493177 Q6AWC8 147 aa9.75□□□□□ -0.85
MSH6-208ENST00000493177 Q6ZQT7 251 aa9.75□□□□□ -0.85
MSH6-208ENST00000493177 Q6ZWC4 215 aa9.75□□□□□ -0.85
MSH6-208ENST00000493177 COX8CQ7Z4L0 72 aa9.75□□□□□ -0.85
MSH6-208ENST00000493177 LINC01551Q86U37 167 aa9.75□□□□□ -0.85
MSH6-208ENST00000493177 C20orf144Q9BQM9 153 aa9.75□□□□□ -0.85
MSH6-208ENST00000493177 SDF2L1Q9HCN8 221 aa9.75□□□□□ -0.85
MSH6-208ENST00000493177 ORM1P02763 201 aa9.74□□□□□ -0.85
MSH6-208ENST00000493177 CRIP1P50238 77 aa9.74□□□□□ -0.85
MSH6-208ENST00000493177 MUC21Q5SSG8 566 aa9.74□□□□□ -0.85
MSH6-208ENST00000493177 FAM159AQ6UWV7 190 aa9.74□□□□□ -0.85
MSH6-208ENST00000493177 C1orf158Q8N1D5 194 aa9.74□□□□□ -0.85
MSH6-208ENST00000493177 TP53TG1Q9Y2A0 90 aa9.74□□□□□ -0.85
MSH6-208ENST00000493177 KRBOX1C9JBD0 128 aa9.73□□□□□ -0.85
MSH6-208ENST00000493177 H7BYZ3 331 aa9.73□□□□□ -0.85
MSH6-208ENST00000493177 M0R036 132 aa9.73□□□□□ -0.85
MSH6-208ENST00000493177 ZNF324O75467 553 aaPredicted RBP9.73□□□□□ -0.85
MSH6-208ENST00000493177 ERVFC1-1P60608 527 aa9.73□□□□□ -0.85
MSH6-208ENST00000493177 TMEM256Q8N2U0 113 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms