RNA–Protein interactions for RNA: ENST00000491467.1

SRGAP3-210, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-210ENST00000491467 CRIP1P50238 77 aa9.11□□□□□ -0.95
SRGAP3-210ENST00000491467 TP53TG3Q9ULZ0 132 aa9.11□□□□□ -0.95
SRGAP3-210ENST00000491467 DYNC2H1Q8NCM8 4307 aaKnown RBP9.1□□□□□ -0.95
SRGAP3-210ENST00000491467 IGKV2-40A0A087WW87 121 aaPredicted RBP9.1□□□□□ -0.95
SRGAP3-210ENST00000491467 M0QZ24 198 aa9.1□□□□□ -0.95
SRGAP3-210ENST00000491467 OVOL1O14753 267 aa9.1□□□□□ -0.95
SRGAP3-210ENST00000491467 IGKV2D-40P01614 121 aaPredicted RBP9.1□□□□□ -0.95
SRGAP3-210ENST00000491467 APOHP02749 345 aaPredicted RBP9.1□□□□□ -0.95
SRGAP3-210ENST00000491467 GZMBP10144 247 aa9.1□□□□□ -0.95
SRGAP3-210ENST00000491467 RAB4AP20338 218 aa9.1□□□□□ -0.95
SRGAP3-210ENST00000491467 HIST1H1AQ02539 215 aaPredicted RBP9.1□□□□□ -0.95
SRGAP3-210ENST00000491467 SLAQ13239 276 aa9.1□□□□□ -0.95
SRGAP3-210ENST00000491467 IQCJQ1A5X6 159 aa9.1□□□□□ -0.95
SRGAP3-210ENST00000491467 TMEM78Q5T7P6 136 aa9.1□□□□□ -0.95
SRGAP3-210ENST00000491467 C8orf86Q6ZUL3 223 aa9.1□□□□□ -0.95
SRGAP3-210ENST00000491467 REC114Q7Z4M0 266 aa9.1□□□□□ -0.95
SRGAP3-210ENST00000491467 TMEM86BQ8N661 226 aa9.1□□□□□ -0.95
SRGAP3-210ENST00000491467 SIGLECL1Q8N7X8 197 aa9.1□□□□□ -0.95
SRGAP3-210ENST00000491467 LINC00477Q96M19 166 aa9.1□□□□□ -0.95
SRGAP3-210ENST00000491467 C8orf49Q96NF6 230 aa9.1□□□□□ -0.95
SRGAP3-210ENST00000491467 ALKBH7Q9BT30 221 aaPredicted RBP9.1□□□□□ -0.95
SRGAP3-210ENST00000491467 IGHV7-4-1A0A0J9YVY3 117 aa9.09□□□□□ -0.95
SRGAP3-210ENST00000491467 TRBV7-9A0A0J9YWB2 115 aa9.09□□□□□ -0.95
SRGAP3-210ENST00000491467 SH2D1AO60880 128 aa9.09□□□□□ -0.95
SRGAP3-210ENST00000491467 GPX1P07203 203 aa9.09□□□□□ -0.95
SRGAP3-210ENST00000491467 CAMPP49913 170 aa9.09□□□□□ -0.95
SRGAP3-210ENST00000491467 ZNF138P52744 262 aa9.09□□□□□ -0.95
SRGAP3-210ENST00000491467 KIAA1644Q3SXP7 199 aa9.09□□□□□ -0.95
SRGAP3-210ENST00000491467 GDF5OSQ5U4N7 250 aa9.09□□□□□ -0.95
SRGAP3-210ENST00000491467 ZNF493Q6ZR52 646 aa9.09□□□□□ -0.95
SRGAP3-210ENST00000491467 C18orf32Q8TCD1 76 aa9.09□□□□□ -0.95
SRGAP3-210ENST00000491467 KCNS1Q96KK3 526 aa9.09□□□□□ -0.95
SRGAP3-210ENST00000491467 C16orf92Q96LL3 132 aa9.09□□□□□ -0.95
SRGAP3-210ENST00000491467 VGLL1Q99990 258 aa9.09□□□□□ -0.95
SRGAP3-210ENST00000491467 SAMD10Q9BYL1 202 aa9.09□□□□□ -0.95
SRGAP3-210ENST00000491467 KLK15Q9H2R5 256 aa9.09□□□□□ -0.95
SRGAP3-210ENST00000491467 DAZ1Q9NQZ3 744 aaKnown RBP9.09□□□□□ -0.95
SRGAP3-210ENST00000491467 UFC1Q9Y3C8 167 aa9.09□□□□□ -0.95
SRGAP3-210ENST00000491467 SACSQ9NZJ4 4579 aa9.09□□□□□ -0.96
SRGAP3-210ENST00000491467 IGHV3OR16-8A0A075B7F1 116 aa9.08□□□□□ -0.96
SRGAP3-210ENST00000491467 TRAV8-2A0A0B4J237 113 aa9.08□□□□□ -0.96
SRGAP3-210ENST00000491467 F2Z2F3 143 aa9.08□□□□□ -0.96
SRGAP3-210ENST00000491467 NUPR1O60356 82 aa9.08□□□□□ -0.96
SRGAP3-210ENST00000491467 PMCHP20382 165 aa9.08□□□□□ -0.96
SRGAP3-210ENST00000491467 PKIAP61925 76 aa9.08□□□□□ -0.96
SRGAP3-210ENST00000491467 Q6ZS46 218 aa9.08□□□□□ -0.96
SRGAP3-210ENST00000491467 Q8N2B8 174 aa9.08□□□□□ -0.96
SRGAP3-210ENST00000491467 RNF152Q8N8N0 203 aa9.08□□□□□ -0.96
SRGAP3-210ENST00000491467 SMPXQ9UHP9 88 aa9.08□□□□□ -0.96
SRGAP3-210ENST00000491467 LOC102724200A0A096LPH7 203 aaPredicted RBP9.07□□□□□ -0.96
SRGAP3-210ENST00000491467 ZNF705FA8MVS1 300 aaPredicted RBP9.07□□□□□ -0.96
SRGAP3-210ENST00000491467 ZNF207O43670 478 aaKnown RBP9.07□□□□□ -0.96
SRGAP3-210ENST00000491467 LINC00310P59036 64 aa9.07□□□□□ -0.96
SRGAP3-210ENST00000491467 BEAN1Q3B7T3 259 aa9.07□□□□□ -0.96
SRGAP3-210ENST00000491467 LINC01559Q495D7 138 aa9.07□□□□□ -0.96
SRGAP3-210ENST00000491467 MYOZ3Q8TDC0 251 aa9.07□□□□□ -0.96
SRGAP3-210ENST00000491467 CHCHD1Q96BP2 118 aaKnown RBP9.07□□□□□ -0.96
SRGAP3-210ENST00000491467 AGPAT4-IT1Q9H0P7 198 aa9.07□□□□□ -0.96
SRGAP3-210ENST00000491467 NRN1Q9NPD7 142 aa9.07□□□□□ -0.96
SRGAP3-210ENST00000491467 ESM1Q9NQ30 184 aa9.07□□□□□ -0.96
SRGAP3-210ENST00000491467 TSTD3H0UI37 97 aa9.06□□□□□ -0.96
SRGAP3-210ENST00000491467 LGALS9O00182 355 aa9.06□□□□□ -0.96
SRGAP3-210ENST00000491467 ZNF324O75467 553 aaPredicted RBP9.06□□□□□ -0.96
SRGAP3-210ENST00000491467 TRBV12-3P01733 135 aa9.06□□□□□ -0.96
SRGAP3-210ENST00000491467 IGHV3-11P01762 117 aa9.06□□□□□ -0.96
SRGAP3-210ENST00000491467 HLA-DMBP28068 263 aa9.06□□□□□ -0.96
SRGAP3-210ENST00000491467 CTRLP40313 264 aa9.06□□□□□ -0.96
SRGAP3-210ENST00000491467 ID1P41134 155 aa9.06□□□□□ -0.96
SRGAP3-210ENST00000491467 UNQ9165/PRO28630Q6UXU0 137 aa9.06□□□□□ -0.96
SRGAP3-210ENST00000491467 OR10J6PQ8NGY7 276 aa9.06□□□□□ -0.96
SRGAP3-210ENST00000491467 UBE2E2Q96LR5 201 aa9.06□□□□□ -0.96
SRGAP3-210ENST00000491467 RHPN1-AS1Q9BWJ2 59 aa9.06□□□□□ -0.96
SRGAP3-210ENST00000491467 NOTCH3Q9UM47 2321 aa9.05□□□□□ -0.96
SRGAP3-210ENST00000491467 IGHV3-66A0A0C4DH42 116 aa9.05□□□□□ -0.96
SRGAP3-210ENST00000491467 G3V4G9 280 aa9.05□□□□□ -0.96
SRGAP3-210ENST00000491467 SOCS3O14543 225 aa9.05□□□□□ -0.96
SRGAP3-210ENST00000491467 ARMS2P0C7Q2 107 aa9.05□□□□□ -0.96
SRGAP3-210ENST00000491467 IGLC6P0CF74 106 aa9.05□□□□□ -0.96
SRGAP3-210ENST00000491467 LYZL1Q6UWQ5 148 aa9.05□□□□□ -0.96
SRGAP3-210ENST00000491467 FER1L6-AS1Q8NA97 138 aa9.05□□□□□ -0.96
SRGAP3-210ENST00000491467 SSBP4Q9BWG4 385 aaPredicted RBP9.05□□□□□ -0.96
SRGAP3-210ENST00000491467 CNFNQ9BYD5 112 aa9.05□□□□□ -0.96
SRGAP3-210ENST00000491467 ZNF702PQ9H963 129 aa9.05□□□□□ -0.96
SRGAP3-210ENST00000491467 NAGKQ9UJ70 344 aa9.05□□□□□ -0.96
SRGAP3-210ENST00000491467 IGHV3OR16-13A0A075B7E8 117 aa9.04□□□□□ -0.96
SRGAP3-210ENST00000491467 IGHV3-74A0A0B4J1X5 117 aa9.04□□□□□ -0.96
SRGAP3-210ENST00000491467 A0A1B0GUS0 222 aa9.04□□□□□ -0.96
SRGAP3-210ENST00000491467 RBMY1BA6NDE4 496 aaKnown RBP9.04□□□□□ -0.96
SRGAP3-210ENST00000491467 RBMY1EA6NEQ0 496 aaKnown RBP9.04□□□□□ -0.96
SRGAP3-210ENST00000491467 PRAC2D3DTV9 90 aa9.04□□□□□ -0.96
SRGAP3-210ENST00000491467 HSBP1O75506 76 aa9.04□□□□□ -0.96
SRGAP3-210ENST00000491467 SCGB1D1O95968 90 aa9.04□□□□□ -0.96
SRGAP3-210ENST00000491467 ORM1P02763 201 aa9.04□□□□□ -0.96
SRGAP3-210ENST00000491467 LGALS1P09382 135 aaKnown RBP9.04□□□□□ -0.96
SRGAP3-210ENST00000491467 OR5AL1P0C617 328 aa9.04□□□□□ -0.96
SRGAP3-210ENST00000491467 RBMY1DP0C7P1 496 aaKnown RBP9.04□□□□□ -0.96
SRGAP3-210ENST00000491467 AMTP48728 403 aa9.04□□□□□ -0.96
SRGAP3-210ENST00000491467 ERCC8Q13216 396 aa9.04□□□□□ -0.96
SRGAP3-210ENST00000491467 IGFL4Q6B9Z1 124 aa9.04□□□□□ -0.96
SRGAP3-210ENST00000491467 RNF182Q8N6D2 247 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms