RNA–Protein interactions for RNA: ENST00000490360.1

UPK3B-205, Transcript of uroplakin 3B, humanhuman

TSL 2

Gene UPK3B, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-205ENST00000490360 BLNKQ8WV28 456 aa13.13□□□□□ -0.31
UPK3B-205ENST00000490360 UQCC1Q9NVA1 299 aa13.13□□□□□ -0.31
UPK3B-205ENST00000490360 WDR83OSQ9Y284 106 aa13.13□□□□□ -0.31
UPK3B-205ENST00000490360 UBR4Q5T4S7 5183 aa13.13□□□□□ -0.31
UPK3B-205ENST00000490360 HMCN2Q8NDA2 5059 aa13.13□□□□□ -0.31
UPK3B-205ENST00000490360 ZNF138P52744 262 aa13.12□□□□□ -0.31
UPK3B-205ENST00000490360 CHAC2Q8WUX2 184 aa13.12□□□□□ -0.31
UPK3B-205ENST00000490360 PLA2G2DQ9UNK4 145 aa13.12□□□□□ -0.31
UPK3B-205ENST00000490360 TRGV11A0A075B6L2 103 aa13.11□□□□□ -0.31
UPK3B-205ENST00000490360 IGKV2-40A0A087WW87 121 aaPredicted RBP13.11□□□□□ -0.31
UPK3B-205ENST00000490360 NAP1L6A6NFF2 107 aa13.11□□□□□ -0.31
UPK3B-205ENST00000490360 NDUFB6O95139 128 aa13.11□□□□□ -0.31
UPK3B-205ENST00000490360 IGKV2D-40P01614 121 aaPredicted RBP13.11□□□□□ -0.31
UPK3B-205ENST00000490360 MBPP02686 304 aaPredicted RBP13.11□□□□□ -0.31
UPK3B-205ENST00000490360 LAGE3Q14657 143 aa13.11□□□□□ -0.31
UPK3B-205ENST00000490360 NHLRC2Q8NBF2 726 aa13.11□□□□□ -0.31
UPK3B-205ENST00000490360 OR4C5Q8NGB2 326 aa13.11□□□□□ -0.31
UPK3B-205ENST00000490360 Q9HAA7 133 aa13.11□□□□□ -0.31
UPK3B-205ENST00000490360 GPN1Q9HCN4 374 aaPredicted RBP13.11□□□□□ -0.31
UPK3B-205ENST00000490360 NOL3O60936 208 aaKnown RBP13.1□□□□□ -0.31
UPK3B-205ENST00000490360 PFN1P07737 140 aaKnown RBP13.1□□□□□ -0.31
UPK3B-205ENST00000490360 ZNF266Q14584 549 aa13.1□□□□□ -0.31
UPK3B-205ENST00000490360 VWC2Q2TAL6 325 aa13.1□□□□□ -0.31
UPK3B-205ENST00000490360 Q6ZQT7 251 aa13.1□□□□□ -0.31
UPK3B-205ENST00000490360 V9GYH0 126 aa13.1□□□□□ -0.31
UPK3B-205ENST00000490360 DNAH8Q96JB1 4490 aa13.09□□□□□ -0.31
UPK3B-205ENST00000490360 PYYP10082 97 aa13.09□□□□□ -0.31
UPK3B-205ENST00000490360 BCAP31P51572 246 aa13.09□□□□□ -0.31
UPK3B-205ENST00000490360 ASAH1Q13510 395 aa13.09□□□□□ -0.31
UPK3B-205ENST00000490360 FAM122CQ6P4D5 195 aa13.09□□□□□ -0.31
UPK3B-205ENST00000490360 FAM159AQ6UWV7 190 aa13.09□□□□□ -0.31
UPK3B-205ENST00000490360 S100A11P31949 105 aa13.08□□□□□ -0.32
UPK3B-205ENST00000490360 CAV2P51636 162 aa13.08□□□□□ -0.32
UPK3B-205ENST00000490360 BAXQ07812 192 aa13.08□□□□□ -0.32
UPK3B-205ENST00000490360 ZNF846Q147U1 533 aa13.08□□□□□ -0.32
UPK3B-205ENST00000490360 OR10J3Q5JRS4 329 aa13.08□□□□□ -0.32
UPK3B-205ENST00000490360 MUC21Q5SSG8 566 aa13.08□□□□□ -0.32
UPK3B-205ENST00000490360 RBAKDNA6NC62 111 aa13.07□□□□□ -0.32
UPK3B-205ENST00000490360 CST7O76096 145 aa13.07□□□□□ -0.32
UPK3B-205ENST00000490360 NBEAP1P0C6P0 100 aa13.07□□□□□ -0.32
UPK3B-205ENST00000490360 S100A5P33763 92 aa13.07□□□□□ -0.32
UPK3B-205ENST00000490360 CSN1S1P47710 185 aa13.07□□□□□ -0.32
UPK3B-205ENST00000490360 TMEM183BQ1AE95 376 aa13.07□□□□□ -0.32
UPK3B-205ENST00000490360 Q6AWC8 147 aa13.07□□□□□ -0.32
UPK3B-205ENST00000490360 TMEM183AQ8IXX5 376 aa13.07□□□□□ -0.32
UPK3B-205ENST00000490360 MITD1Q8WV92 249 aa13.07□□□□□ -0.32
UPK3B-205ENST00000490360 LENEPQ9Y5L5 61 aa13.07□□□□□ -0.32
UPK3B-205ENST00000490360 M0R2P5 195 aa13.06□□□□□ -0.32
UPK3B-205ENST00000490360 HBG1P69891 147 aa13.06□□□□□ -0.32
UPK3B-205ENST00000490360 HBG2P69892 147 aa13.06□□□□□ -0.32
UPK3B-205ENST00000490360 FLVCR2Q9UPI3 526 aa13.06□□□□□ -0.32
UPK3B-205ENST00000490360 UBE2L5PA0A1B0GUS4 154 aa13.05□□□□□ -0.32
UPK3B-205ENST00000490360 CIDEAO60543 219 aa13.05□□□□□ -0.32
UPK3B-205ENST00000490360 GATA1P15976 413 aaPredicted RBP13.05□□□□□ -0.32
UPK3B-205ENST00000490360 PVALBP20472 110 aaPredicted RBP13.05□□□□□ -0.32
UPK3B-205ENST00000490360 INPP1P49441 399 aa13.05□□□□□ -0.32
UPK3B-205ENST00000490360 BAK1Q16611 211 aa13.05□□□□□ -0.32
UPK3B-205ENST00000490360 Q8TAT8 98 aa13.05□□□□□ -0.32
UPK3B-205ENST00000490360 SH3BGRL3Q9H299 93 aa13.05□□□□□ -0.32
UPK3B-205ENST00000490360 TRAV8-3A0A0A6YYJ7 113 aa13.04□□□□□ -0.32
UPK3B-205ENST00000490360 LOC100131303A0A0U1RQF7 123 aa13.04□□□□□ -0.32
UPK3B-205ENST00000490360 H3BMQ9 156 aa13.04□□□□□ -0.32
UPK3B-205ENST00000490360 SULT1A1P50225 295 aa13.04□□□□□ -0.32
UPK3B-205ENST00000490360 ATP6V1FQ16864 119 aa13.04□□□□□ -0.32
UPK3B-205ENST00000490360 CNPY1Q3B7I2 92 aa13.04□□□□□ -0.32
UPK3B-205ENST00000490360 LELP1Q5T871 98 aa13.04□□□□□ -0.32
UPK3B-205ENST00000490360 SLC25A2Q9BXI2 301 aa13.04□□□□□ -0.32
UPK3B-205ENST00000490360 LSM5Q9Y4Y9 91 aaKnown RBP13.04□□□□□ -0.32
UPK3B-205ENST00000490360 LRP1Q07954 4544 aaKnown RBP13.03□□□□□ -0.32
UPK3B-205ENST00000490360 IGHV3-30P01768 117 aa13.03□□□□□ -0.32
UPK3B-205ENST00000490360 IGHV3-33P01772 117 aa13.03□□□□□ -0.32
UPK3B-205ENST00000490360 IGHV3-30-3P0DP02 117 aa13.03□□□□□ -0.32
UPK3B-205ENST00000490360 IGHV3-30-5P0DP03 117 aa13.03□□□□□ -0.32
UPK3B-205ENST00000490360 FGF7P21781 194 aa13.03□□□□□ -0.32
UPK3B-205ENST00000490360 SCXQ7RTU7 201 aa13.03□□□□□ -0.32
UPK3B-205ENST00000490360 STX12Q86Y82 276 aa13.03□□□□□ -0.32
UPK3B-205ENST00000490360 PRADC1Q9BSG0 188 aa13.03□□□□□ -0.32
UPK3B-205ENST00000490360 OR51M1Q9H341 326 aa13.03□□□□□ -0.32
UPK3B-205ENST00000490360 COX11Q9Y6N1 276 aa13.03□□□□□ -0.32
UPK3B-205ENST00000490360 ACOT6Q3I5F7 207 aaPredicted RBP13.02□□□□□ -0.33
UPK3B-205ENST00000490360 TOR2AQ5JU69 321 aa13.02□□□□□ -0.33
UPK3B-205ENST00000490360 FAM167A-AS1Q96KT0 104 aa13.02□□□□□ -0.33
UPK3B-205ENST00000490360 ATP5SQ99766 215 aa13.02□□□□□ -0.33
UPK3B-205ENST00000490360 FAM24AA6NFZ4 105 aa13.01□□□□□ -0.33
UPK3B-205ENST00000490360 FBLL1A6NHQ2 334 aaKnown RBP13.01□□□□□ -0.33
UPK3B-205ENST00000490360 CENPXA8MT69 81 aa13.01□□□□□ -0.33
UPK3B-205ENST00000490360 RHOHQ15669 191 aa13.01□□□□□ -0.33
UPK3B-205ENST00000490360 TMED6Q8WW62 240 aa13.01□□□□□ -0.33
UPK3B-205ENST00000490360 CHAC1Q9BUX1 264 aa13.01□□□□□ -0.33
UPK3B-205ENST00000490360 LYRM2Q9NU23 88 aaPredicted RBP13.01□□□□□ -0.33
UPK3B-205ENST00000490360 TRBV6-4A0A1B0GX49 114 aa13□□□□□ -0.33
UPK3B-205ENST00000490360 KRTAP10-4P60372 401 aaPredicted RBP13□□□□□ -0.33
UPK3B-205ENST00000490360 SPANXN2Q5MJ10 180 aa13□□□□□ -0.33
UPK3B-205ENST00000490360 TRIQKQ629K1 86 aa13□□□□□ -0.33
UPK3B-205ENST00000490360 SLC25A29Q8N8R3 303 aa13□□□□□ -0.33
UPK3B-205ENST00000490360 PAXXQ9BUH6 204 aa13□□□□□ -0.33
UPK3B-205ENST00000490360 NPCDR1Q9BY65 106 aa13□□□□□ -0.33
UPK3B-205ENST00000490360 GTSF1LQ9H1H1 148 aa13□□□□□ -0.33
UPK3B-205ENST00000490360 C11orf1Q9H5F2 150 aa13□□□□□ -0.33
UPK3B-205ENST00000490360 IGHV3-16A0A0C4DH30 117 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms