RNA–Protein interactions for RNA: ENST00000489961.1

VPS13D-210, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-210ENST00000489961 SAPCD1Q5SSQ6 148 aa7.84□□□□□ -1.15
VPS13D-210ENST00000489961 TEX261Q6UWH6 196 aa7.84□□□□□ -1.15
VPS13D-210ENST00000489961 PRNTQ86SH4 94 aa7.84□□□□□ -1.15
VPS13D-210ENST00000489961 FMC1Q96HJ9 113 aa7.84□□□□□ -1.15
VPS13D-210ENST00000489961 TXNDC17Q9BRA2 123 aa7.84□□□□□ -1.15
VPS13D-210ENST00000489961 PYGO2Q9BRQ0 406 aa7.84□□□□□ -1.15
VPS13D-210ENST00000489961 HUWE1Q7Z6Z7 4374 aaKnown RBP7.84□□□□□ -1.15
VPS13D-210ENST00000489961 TRAV34A0A0B4J273 112 aa7.83□□□□□ -1.16
VPS13D-210ENST00000489961 RGS13O14921 159 aa7.83□□□□□ -1.16
VPS13D-210ENST00000489961 ZNF324O75467 553 aaPredicted RBP7.83□□□□□ -1.16
VPS13D-210ENST00000489961 IGLV2-11P01706 119 aa7.83□□□□□ -1.16
VPS13D-210ENST00000489961 PRR9Q5T870 116 aa7.83□□□□□ -1.16
VPS13D-210ENST00000489961 ZNF493Q6ZR52 646 aa7.83□□□□□ -1.16
VPS13D-210ENST00000489961 C11orf45Q8TAV5 145 aa7.83□□□□□ -1.16
VPS13D-210ENST00000489961 MUC7Q8TAX7 377 aa7.83□□□□□ -1.16
VPS13D-210ENST00000489961 TVP23CQ96ET8 276 aa7.83□□□□□ -1.16
VPS13D-210ENST00000489961 C16orf74Q96GX8 76 aa7.83□□□□□ -1.16
VPS13D-210ENST00000489961 LINC00479Q96M42 142 aa7.83□□□□□ -1.16
VPS13D-210ENST00000489961 TRAV21A0A0B4J279 112 aa7.82□□□□□ -1.16
VPS13D-210ENST00000489961 TEX48A0A1B0GUV7 120 aa7.82□□□□□ -1.16
VPS13D-210ENST00000489961 SCO2A0A1W2PP80 73 aa7.82□□□□□ -1.16
VPS13D-210ENST00000489961 CXorf65A6NEN9 183 aa7.82□□□□□ -1.16
VPS13D-210ENST00000489961 S100A9P06702 114 aaKnown RBP7.82□□□□□ -1.16
VPS13D-210ENST00000489961 SPART-AS1P0CW21 52 aa7.82□□□□□ -1.16
VPS13D-210ENST00000489961 BCL2P10415 239 aa7.82□□□□□ -1.16
VPS13D-210ENST00000489961 EMP1P54849 157 aa7.82□□□□□ -1.16
VPS13D-210ENST00000489961 MEF2BQ02080 365 aaPredicted RBP7.82□□□□□ -1.16
VPS13D-210ENST00000489961 SMUG1Q53HV7 270 aa7.82□□□□□ -1.16
VPS13D-210ENST00000489961 Q6AWC8 147 aa7.82□□□□□ -1.16
VPS13D-210ENST00000489961 Q86TA4 180 aa7.82□□□□□ -1.16
VPS13D-210ENST00000489961 ZNF680Q8NEM1 530 aa7.82□□□□□ -1.16
VPS13D-210ENST00000489961 TMEM263Q8WUH6 116 aaKnown RBP7.82□□□□□ -1.16
VPS13D-210ENST00000489961 LINC00467Q9BRT7 94 aa7.82□□□□□ -1.16
VPS13D-210ENST00000489961 VAX2Q9UIW0 290 aa7.82□□□□□ -1.16
VPS13D-210ENST00000489961 KLF12Q9Y4X4 402 aa7.82□□□□□ -1.16
VPS13D-210ENST00000489961 STAB2Q8WWQ8 2551 aa7.81□□□□□ -1.16
VPS13D-210ENST00000489961 TRBV6-1A0A0K0K1D8 114 aa7.81□□□□□ -1.16
VPS13D-210ENST00000489961 CBY3A6NI87 242 aa7.81□□□□□ -1.16
VPS13D-210ENST00000489961 PDE6DO43924 150 aa7.81□□□□□ -1.16
VPS13D-210ENST00000489961 PRM2P04554 102 aa7.81□□□□□ -1.16
VPS13D-210ENST00000489961 AZU1P20160 251 aa7.81□□□□□ -1.16
VPS13D-210ENST00000489961 TMEM183BQ1AE95 376 aa7.81□□□□□ -1.16
VPS13D-210ENST00000489961 EIF4E3Q8N5X7 224 aaKnown RBP7.81□□□□□ -1.16
VPS13D-210ENST00000489961 LYPD6BQ8NI32 183 aa7.81□□□□□ -1.16
VPS13D-210ENST00000489961 C8orf49Q96NF6 230 aa7.81□□□□□ -1.16
VPS13D-210ENST00000489961 ZFP30Q9Y2G7 519 aa7.81□□□□□ -1.16
VPS13D-210ENST00000489961 IGHV1OR15-1A0A075B7D0 117 aa7.8□□□□□ -1.16
VPS13D-210ENST00000489961 C3orf84H3BNL1 204 aa7.8□□□□□ -1.16
VPS13D-210ENST00000489961 GCGP01275 180 aa7.8□□□□□ -1.16
VPS13D-210ENST00000489961 ANXA2RQ3ZCQ2 193 aa7.8□□□□□ -1.16
VPS13D-210ENST00000489961 FAM222AQ5U5X8 452 aa7.8□□□□□ -1.16
VPS13D-210ENST00000489961 FAM159AQ6UWV7 190 aa7.8□□□□□ -1.16
VPS13D-210ENST00000489961 RNASE8Q8TDE3 154 aaKnown RBP7.8□□□□□ -1.16
VPS13D-210ENST00000489961 C2CD4CQ8TF44 421 aa7.8□□□□□ -1.16
VPS13D-210ENST00000489961 C11orf52Q96A22 123 aa7.8□□□□□ -1.16
VPS13D-210ENST00000489961 RBFOX3A6NFN3 312 aa7.79□□□□□ -1.16
VPS13D-210ENST00000489961 LYRM9A8MSI8 78 aa7.79□□□□□ -1.16
VPS13D-210ENST00000489961 SNURFLB1AK76 121 aa7.79□□□□□ -1.16
VPS13D-210ENST00000489961 LTAP01374 205 aa7.79□□□□□ -1.16
VPS13D-210ENST00000489961 PFN1P07737 140 aaKnown RBP7.79□□□□□ -1.16
VPS13D-210ENST00000489961 NANOS2P60321 138 aaKnown RBP7.79□□□□□ -1.16
VPS13D-210ENST00000489961 MUC21Q5SSG8 566 aa7.79□□□□□ -1.16
VPS13D-210ENST00000489961 Q6ZQT7 251 aa7.79□□□□□ -1.16
VPS13D-210ENST00000489961 DKK2Q9UBU2 259 aa7.79□□□□□ -1.16
VPS13D-210ENST00000489961 NAGKQ9UJ70 344 aa7.79□□□□□ -1.16
VPS13D-210ENST00000489961 CELA1Q9UNI1 258 aa7.79□□□□□ -1.16
VPS13D-210ENST00000489961 TIMM8BQ9Y5J9 83 aaPredicted RBP7.79□□□□□ -1.16
VPS13D-210ENST00000489961 TRGV11A0A075B6L2 103 aa7.78□□□□□ -1.16
VPS13D-210ENST00000489961 PLAC8L1A1L4L8 177 aa7.78□□□□□ -1.16
VPS13D-210ENST00000489961 RPL35P42766 123 aaKnown RBP7.78□□□□□ -1.16
VPS13D-210ENST00000489961 ZNF80P51504 273 aaPredicted RBP7.78□□□□□ -1.16
VPS13D-210ENST00000489961 ZNF506Q5JVG8 444 aa7.78□□□□□ -1.16
VPS13D-210ENST00000489961 IBA57Q5T440 356 aaKnown RBP7.78□□□□□ -1.16
VPS13D-210ENST00000489961 ZFAND6Q6FIF0 208 aa7.78□□□□□ -1.16
VPS13D-210ENST00000489961 BAGE2Q86Y30 109 aa7.78□□□□□ -1.16
VPS13D-210ENST00000489961 KCNS1Q96KK3 526 aa7.78□□□□□ -1.16
VPS13D-210ENST00000489961 MED9Q9NWA0 146 aa7.78□□□□□ -1.16
VPS13D-210ENST00000489961 FABP5P3A8MUU1 101 aa7.77□□□□□ -1.17
VPS13D-210ENST00000489961 DAD1P61803 113 aa7.77□□□□□ -1.17
VPS13D-210ENST00000489961 ZNF415Q09FC8 603 aa7.77□□□□□ -1.17
VPS13D-210ENST00000489961 C12orf74Q32Q52 190 aa7.77□□□□□ -1.17
VPS13D-210ENST00000489961 TDRG1Q3Y452 100 aa7.77□□□□□ -1.17
VPS13D-210ENST00000489961 TOR2AQ5JU69 321 aa7.77□□□□□ -1.17
VPS13D-210ENST00000489961 COX8CQ7Z4L0 72 aa7.77□□□□□ -1.17
VPS13D-210ENST00000489961 TMEM183AQ8IXX5 376 aa7.77□□□□□ -1.17
VPS13D-210ENST00000489961 PHLDA1Q8WV24 401 aaPredicted RBP7.77□□□□□ -1.17
VPS13D-210ENST00000489961 PCNPQ8WW12 178 aaKnown RBP7.77□□□□□ -1.17
VPS13D-210ENST00000489961 FAM210AQ96ND0 272 aa7.77□□□□□ -1.17
VPS13D-210ENST00000489961 EIF5A2Q9GZV4 153 aaKnown RBP7.77□□□□□ -1.17
VPS13D-210ENST00000489961 SDF2L1Q9HCN8 221 aa7.77□□□□□ -1.17
VPS13D-210ENST00000489961 NOP10Q9NPE3 64 aaKnown RBP7.77□□□□□ -1.17
VPS13D-210ENST00000489961 GSN-AS1Q9NRJ2 163 aa7.77□□□□□ -1.17
VPS13D-210ENST00000489961 TP53TG3Q9ULZ0 132 aa7.77□□□□□ -1.17
VPS13D-210ENST00000489961 NUPR2A6NF83 97 aa7.76□□□□□ -1.17
VPS13D-210ENST00000489961 TCL1AP56279 114 aa7.76□□□□□ -1.17
VPS13D-210ENST00000489961 RAB14P61106 215 aa7.76□□□□□ -1.17
VPS13D-210ENST00000489961 DAZ2Q13117 558 aaKnown RBP7.76□□□□□ -1.17
VPS13D-210ENST00000489961 CASC10Q5T4H9 136 aa7.76□□□□□ -1.17
VPS13D-210ENST00000489961 FAM162BQ5T6X4 162 aa7.76□□□□□ -1.17
VPS13D-210ENST00000489961 Q6ZTC4 211 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms