RNA–Protein interactions for RNA: ENST00000489892.1

TRIM40-208, Transcript of tripartite motif containing 40, humanhuman

TSL 3

Gene TRIM40, Length 941 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-208ENST00000489892 C11orf44Q8N8P7 122 aa8.87□□□□□ -0.99
TRIM40-208ENST00000489892 TMEM75Q8N9X5 138 aa8.87□□□□□ -0.99
TRIM40-208ENST00000489892 NUDT10Q8NFP7 164 aa8.87□□□□□ -0.99
TRIM40-208ENST00000489892 NUDT11Q96G61 164 aa8.87□□□□□ -0.99
TRIM40-208ENST00000489892 RAX2Q96IS3 184 aa8.87□□□□□ -0.99
TRIM40-208ENST00000489892 C20orf144Q9BQM9 153 aa8.87□□□□□ -0.99
TRIM40-208ENST00000489892 MLST8Q9BVC4 326 aa8.87□□□□□ -0.99
TRIM40-208ENST00000489892 SIGLEC8Q9NYZ4 499 aa8.87□□□□□ -0.99
TRIM40-208ENST00000489892 TP53TG3Q9ULZ0 132 aa8.87□□□□□ -0.99
TRIM40-208ENST00000489892 IGHV3-49A0A0A0MS15 119 aa8.86□□□□□ -0.99
TRIM40-208ENST00000489892 TRAV2A0A0B4J234 112 aa8.86□□□□□ -0.99
TRIM40-208ENST00000489892 IGHV3-66A0A0C4DH42 116 aa8.86□□□□□ -0.99
TRIM40-208ENST00000489892 A0A1B0GW15 77 aa8.86□□□□□ -0.99
TRIM40-208ENST00000489892 GRIFINA4D1Z8 144 aa8.86□□□□□ -0.99
TRIM40-208ENST00000489892 ZNF705FA8MVS1 300 aaPredicted RBP8.86□□□□□ -0.99
TRIM40-208ENST00000489892 ZNF705DP0CH99 300 aaPredicted RBP8.86□□□□□ -0.99
TRIM40-208ENST00000489892 ZNF705BP0CI00 300 aaPredicted RBP8.86□□□□□ -0.99
TRIM40-208ENST00000489892 SLURP1P55000 103 aa8.86□□□□□ -0.99
TRIM40-208ENST00000489892 Q6AWC8 147 aa8.86□□□□□ -0.99
TRIM40-208ENST00000489892 TCF24Q7RTU0 167 aa8.86□□□□□ -0.99
TRIM40-208ENST00000489892 Q86TA4 180 aa8.86□□□□□ -0.99
TRIM40-208ENST00000489892 DYNLRB2Q8TF09 96 aa8.86□□□□□ -0.99
TRIM40-208ENST00000489892 DAZAP1Q96EP5 407 aaKnown RBP8.86□□□□□ -0.99
TRIM40-208ENST00000489892 PRO1933Q9H354 126 aa8.86□□□□□ -0.99
TRIM40-208ENST00000489892 IGHV3OR16-13A0A075B7E8 117 aa8.85□□□□□ -0.99
TRIM40-208ENST00000489892 IGHV3-74A0A0B4J1X5 117 aa8.85□□□□□ -0.99
TRIM40-208ENST00000489892 A0A1B0GXF2 115 aa8.85□□□□□ -0.99
TRIM40-208ENST00000489892 C19orf71A6NCJ1 209 aa8.85□□□□□ -0.99
TRIM40-208ENST00000489892 NPIPB6E9PJ23 425 aa8.85□□□□□ -0.99
TRIM40-208ENST00000489892 OVOL1O14753 267 aa8.85□□□□□ -0.99
TRIM40-208ENST00000489892 ZNF324O75467 553 aaPredicted RBP8.85□□□□□ -0.99
TRIM40-208ENST00000489892 P01737 135 aa8.85□□□□□ -0.99
TRIM40-208ENST00000489892 APOHP02749 345 aaPredicted RBP8.85□□□□□ -0.99
TRIM40-208ENST00000489892 PF4P02776 101 aa8.85□□□□□ -0.99
TRIM40-208ENST00000489892 GPX1P07203 203 aa8.85□□□□□ -0.99
TRIM40-208ENST00000489892 SRIP30626 198 aa8.85□□□□□ -0.99
TRIM40-208ENST00000489892 HBBP68871 147 aa8.85□□□□□ -0.99
TRIM40-208ENST00000489892 MRPL54Q6P161 138 aaKnown RBP8.85□□□□□ -0.99
TRIM40-208ENST00000489892 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.85□□□□□ -0.99
TRIM40-208ENST00000489892 C18orf65Q6ZTR6 163 aa8.85□□□□□ -0.99
TRIM40-208ENST00000489892 C16orf92Q96LL3 132 aa8.85□□□□□ -0.99
TRIM40-208ENST00000489892 ZFP30Q9Y2G7 519 aa8.85□□□□□ -0.99
TRIM40-208ENST00000489892 TRAV25A0A0B4J276 109 aa8.84□□□□□ -0.99
TRIM40-208ENST00000489892 AMTP48728 403 aa8.84□□□□□ -0.99
TRIM40-208ENST00000489892 TCL1AP56279 114 aa8.84□□□□□ -0.99
TRIM40-208ENST00000489892 LINC00310P59036 64 aa8.84□□□□□ -0.99
TRIM40-208ENST00000489892 SNRPD3P62318 126 aaKnown RBP8.84□□□□□ -0.99
TRIM40-208ENST00000489892 RYR3Q15413 4870 aa8.84□□□□□ -0.99
TRIM40-208ENST00000489892 NSUN5P1Q3KNT7 163 aa8.84□□□□□ -0.99
TRIM40-208ENST00000489892 RBPMS2Q6ZRY4 209 aaKnown RBP8.84□□□□□ -0.99
TRIM40-208ENST00000489892 LINC00469Q8N7U9 141 aa8.84□□□□□ -0.99
TRIM40-208ENST00000489892 NUP35Q8NFH5 326 aa8.84□□□□□ -0.99
TRIM40-208ENST00000489892 DLX4Q92988 240 aaPredicted RBP8.84□□□□□ -0.99
TRIM40-208ENST00000489892 NEU1Q99519 415 aa8.84□□□□□ -0.99
TRIM40-208ENST00000489892 CITED1Q99966 193 aa8.84□□□□□ -0.99
TRIM40-208ENST00000489892 VAMP8Q9BV40 100 aa8.84□□□□□ -0.99
TRIM40-208ENST00000489892 SMAD5-AS1Q9Y6J3 95 aa8.84□□□□□ -0.99
TRIM40-208ENST00000489892 RBAKDNA6NC62 111 aa8.83□□□□□ -1
TRIM40-208ENST00000489892 H3BTX0 84 aa8.83□□□□□ -1
TRIM40-208ENST00000489892 PMCHP20382 165 aa8.83□□□□□ -1
TRIM40-208ENST00000489892 GNG5P63218 68 aa8.83□□□□□ -1
TRIM40-208ENST00000489892 PMCHL1Q16048 86 aa8.83□□□□□ -1
TRIM40-208ENST00000489892 Q6ZWC4 215 aa8.83□□□□□ -1
TRIM40-208ENST00000489892 EXOC3-AS1Q8N2X6 119 aa8.83□□□□□ -1
TRIM40-208ENST00000489892 OR2K2Q8NGT1 345 aa8.83□□□□□ -1
TRIM40-208ENST00000489892 BORCS7Q96B45 105 aa8.83□□□□□ -1
TRIM40-208ENST00000489892 KMT2CQ8NEZ4 4911 aaKnown RBP8.82□□□□□ -1
TRIM40-208ENST00000489892 C20orf202A1L168 122 aa8.82□□□□□ -1
TRIM40-208ENST00000489892 ADARB2-AS1A8MUL3 147 aa8.82□□□□□ -1
TRIM40-208ENST00000489892 HIGD1CA8MV81 97 aa8.82□□□□□ -1
TRIM40-208ENST00000489892 DIRC3C9JPN6 131 aa8.82□□□□□ -1
TRIM40-208ENST00000489892 M0R143 59 aa8.82□□□□□ -1
TRIM40-208ENST00000489892 NUPR1O60356 82 aa8.82□□□□□ -1
TRIM40-208ENST00000489892 FOXA3P55318 350 aaPredicted RBP8.82□□□□□ -1
TRIM40-208ENST00000489892 PRR27Q6MZM9 219 aa8.82□□□□□ -1
TRIM40-208ENST00000489892 GATD1Q8NB37 220 aa8.82□□□□□ -1
TRIM40-208ENST00000489892 NHLRC2Q8NBF2 726 aa8.82□□□□□ -1
TRIM40-208ENST00000489892 C18orf32Q8TCD1 76 aa8.82□□□□□ -1
TRIM40-208ENST00000489892 CHCHD1Q96BP2 118 aaKnown RBP8.82□□□□□ -1
TRIM40-208ENST00000489892 C17orf77Q96MU5 243 aa8.82□□□□□ -1
TRIM40-208ENST00000489892 DUX3Q96PT4 197 aa8.82□□□□□ -1
TRIM40-208ENST00000489892 SPAG8Q99932 426 aaPredicted RBP8.82□□□□□ -1
TRIM40-208ENST00000489892 NDFIP1Q9BT67 221 aa8.82□□□□□ -1
TRIM40-208ENST00000489892 TRAV34A0A0B4J273 112 aa8.81□□□□□ -1
TRIM40-208ENST00000489892 OR4C46A6NHA9 309 aa8.81□□□□□ -1
TRIM40-208ENST00000489892 CSN3P07498 182 aa8.81□□□□□ -1
TRIM40-208ENST00000489892 SNRPCP09234 159 aaKnown RBP8.81□□□□□ -1
TRIM40-208ENST00000489892 INSL3P51460 131 aa8.81□□□□□ -1
TRIM40-208ENST00000489892 CMC4P56277 68 aaPredicted RBP8.81□□□□□ -1
TRIM40-208ENST00000489892 PSG3Q16557 428 aa8.81□□□□□ -1
TRIM40-208ENST00000489892 SAPCD1Q5SSQ6 148 aa8.81□□□□□ -1
TRIM40-208ENST00000489892 LCN12Q6JVE5 192 aa8.81□□□□□ -1
TRIM40-208ENST00000489892 GOLT1AQ6ZVE7 132 aa8.81□□□□□ -1
TRIM40-208ENST00000489892 LINC00479Q96M42 142 aa8.81□□□□□ -1
TRIM40-208ENST00000489892 MCRIP2Q9BUT9 160 aaKnown RBP8.81□□□□□ -1
TRIM40-208ENST00000489892 RPH3ALQ9UNE2 315 aa8.81□□□□□ -1
TRIM40-208ENST00000489892 NOTCH1P46531 2555 aa8.8□□□□□ -1
TRIM40-208ENST00000489892 SOCS3O14543 225 aa8.8□□□□□ -1
TRIM40-208ENST00000489892 HSBP1O75506 76 aa8.8□□□□□ -1
TRIM40-208ENST00000489892 SLAQ13239 276 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms