RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 C2CD4CQ8TF44 421 aa7.75□□□□□ -1.17
SCAMP4-208ENST00000489554 RNF183Q96D59 192 aa7.75□□□□□ -1.17
SCAMP4-208ENST00000489554 FMC1Q96HJ9 113 aa7.75□□□□□ -1.17
SCAMP4-208ENST00000489554 YPEL4Q96NS1 127 aa7.75□□□□□ -1.17
SCAMP4-208ENST00000489554 PYGO2Q9BRQ0 406 aa7.75□□□□□ -1.17
SCAMP4-208ENST00000489554 ATG101Q9BSB4 218 aa7.75□□□□□ -1.17
SCAMP4-208ENST00000489554 CSTL1Q9H114 145 aa7.75□□□□□ -1.17
SCAMP4-208ENST00000489554 AAMDCQ9H7C9 122 aa7.75□□□□□ -1.17
SCAMP4-208ENST00000489554 OSTCQ9NRP0 149 aa7.75□□□□□ -1.17
SCAMP4-208ENST00000489554 EPDR1Q9UM22 224 aa7.75□□□□□ -1.17
SCAMP4-208ENST00000489554 ZNF705FA8MVS1 300 aaPredicted RBP7.74□□□□□ -1.17
SCAMP4-208ENST00000489554 GCGP01275 180 aa7.74□□□□□ -1.17
SCAMP4-208ENST00000489554 PFN1P07737 140 aaKnown RBP7.74□□□□□ -1.17
SCAMP4-208ENST00000489554 CSN1S1P47710 185 aa7.74□□□□□ -1.17
SCAMP4-208ENST00000489554 DEFB131AP59861 70 aa7.74□□□□□ -1.17
SCAMP4-208ENST00000489554 ZNF124Q15973 351 aa7.74□□□□□ -1.17
SCAMP4-208ENST00000489554 PSG3Q16557 428 aa7.74□□□□□ -1.17
SCAMP4-208ENST00000489554 TMEM183BQ1AE95 376 aa7.74□□□□□ -1.17
SCAMP4-208ENST00000489554 C16orf92Q96LL3 132 aa7.74□□□□□ -1.17
SCAMP4-208ENST00000489554 CLEC5AQ9NY25 188 aa7.74□□□□□ -1.17
SCAMP4-208ENST00000489554 TRBV6-1A0A0K0K1D8 114 aa7.73□□□□□ -1.17
SCAMP4-208ENST00000489554 ZNF688P0C7X2 276 aa7.73□□□□□ -1.17
SCAMP4-208ENST00000489554 ERVFC1-1P60608 527 aa7.73□□□□□ -1.17
SCAMP4-208ENST00000489554 GNG5P63218 68 aa7.73□□□□□ -1.17
SCAMP4-208ENST00000489554 CENPWQ5EE01 88 aa7.73□□□□□ -1.17
SCAMP4-208ENST00000489554 BAGE2Q86Y30 109 aa7.73□□□□□ -1.17
SCAMP4-208ENST00000489554 MRPL53Q96EL3 112 aaKnown RBP7.73□□□□□ -1.17
SCAMP4-208ENST00000489554 SAV1Q9H4B6 383 aaPredicted RBP7.73□□□□□ -1.17
SCAMP4-208ENST00000489554 KLF12Q9Y4X4 402 aa7.73□□□□□ -1.17
SCAMP4-208ENST00000489554 URGCP-MRPS24S4R325 110 aa7.73□□□□□ -1.17
SCAMP4-208ENST00000489554 STARD9Q9P2P6 4700 aa7.72□□□□□ -1.17
SCAMP4-208ENST00000489554 A0A0J9YWU9 116 aa7.72□□□□□ -1.17
SCAMP4-208ENST00000489554 TYMSP04818 313 aa7.72□□□□□ -1.17
SCAMP4-208ENST00000489554 GDF5OSQ5U4N7 250 aa7.72□□□□□ -1.17
SCAMP4-208ENST00000489554 SAMD13Q5VXD3 122 aa7.72□□□□□ -1.17
SCAMP4-208ENST00000489554 FAM231DQ6ZW35 169 aa7.72□□□□□ -1.17
SCAMP4-208ENST00000489554 STHQ8IWL8 128 aa7.72□□□□□ -1.17
SCAMP4-208ENST00000489554 DERL1Q9BUN8 251 aa7.72□□□□□ -1.17
SCAMP4-208ENST00000489554 IL36BQ9NZH7 164 aa7.72□□□□□ -1.17
SCAMP4-208ENST00000489554 CSMD3Q7Z407 3707 aa7.72□□□□□ -1.17
SCAMP4-208ENST00000489554 AGRNO00468 2067 aa7.71□□□□□ -1.17
SCAMP4-208ENST00000489554 IGKV2-40A0A087WW87 121 aaPredicted RBP7.71□□□□□ -1.18
SCAMP4-208ENST00000489554 TGIF2-C20orf24A0A0A6YYL0 155 aa7.71□□□□□ -1.18
SCAMP4-208ENST00000489554 DIRC3C9JPN6 131 aa7.71□□□□□ -1.18
SCAMP4-208ENST00000489554 F6UB75 175 aa7.71□□□□□ -1.18
SCAMP4-208ENST00000489554 CA1P00915 261 aaPredicted RBP7.71□□□□□ -1.18
SCAMP4-208ENST00000489554 IGKV2D-40P01614 121 aaPredicted RBP7.71□□□□□ -1.18
SCAMP4-208ENST00000489554 IGLV2-11P01706 119 aa7.71□□□□□ -1.18
SCAMP4-208ENST00000489554 TCRAP04437 139 aa7.71□□□□□ -1.18
SCAMP4-208ENST00000489554 PSMG4Q5JS54 123 aa7.71□□□□□ -1.18
SCAMP4-208ENST00000489554 IBA57Q5T440 356 aaKnown RBP7.71□□□□□ -1.18
SCAMP4-208ENST00000489554 DAZAP1Q96EP5 407 aaKnown RBP7.71□□□□□ -1.18
SCAMP4-208ENST00000489554 ZFP30Q9Y2G7 519 aa7.71□□□□□ -1.18
SCAMP4-208ENST00000489554 TENM2Q9NT68 2774 aa7.7□□□□□ -1.18
SCAMP4-208ENST00000489554 TRBV20OR9-2A0A075B6H5 130 aa7.7□□□□□ -1.18
SCAMP4-208ENST00000489554 A0A0J9YX75 114 aa7.7□□□□□ -1.18
SCAMP4-208ENST00000489554 A0A1W2PPQ1 181 aa7.7□□□□□ -1.18
SCAMP4-208ENST00000489554 A8MTW9 85 aa7.7□□□□□ -1.18
SCAMP4-208ENST00000489554 CXCL1P09341 107 aa7.7□□□□□ -1.18
SCAMP4-208ENST00000489554 ZNF705DP0CH99 300 aaPredicted RBP7.7□□□□□ -1.18
SCAMP4-208ENST00000489554 ZNF705BP0CI00 300 aaPredicted RBP7.7□□□□□ -1.18
SCAMP4-208ENST00000489554 MGST1P10620 155 aaKnown RBP7.7□□□□□ -1.18
SCAMP4-208ENST00000489554 ID1P41134 155 aa7.7□□□□□ -1.18
SCAMP4-208ENST00000489554 SNRPD3P62318 126 aaKnown RBP7.7□□□□□ -1.18
SCAMP4-208ENST00000489554 MORN3Q6PF18 240 aaPredicted RBP7.7□□□□□ -1.18
SCAMP4-208ENST00000489554 TMEM75Q8N9X5 138 aa7.7□□□□□ -1.18
SCAMP4-208ENST00000489554 IGF2BP2-AS1Q96M15 143 aa7.7□□□□□ -1.18
SCAMP4-208ENST00000489554 LINC00479Q96M42 142 aa7.7□□□□□ -1.18
SCAMP4-208ENST00000489554 VGLL1Q99990 258 aa7.7□□□□□ -1.18
SCAMP4-208ENST00000489554 TRAV8-1A0A0A6YYK1 113 aa7.69□□□□□ -1.18
SCAMP4-208ENST00000489554 NUPR2A6NF83 97 aa7.69□□□□□ -1.18
SCAMP4-208ENST00000489554 KNCNA6PVL3 124 aa7.69□□□□□ -1.18
SCAMP4-208ENST00000489554 NPIPB6E9PJ23 425 aa7.69□□□□□ -1.18
SCAMP4-208ENST00000489554 GATCO43716 136 aaKnown RBP7.69□□□□□ -1.18
SCAMP4-208ENST00000489554 MT-ND6P03923 174 aa7.69□□□□□ -1.18
SCAMP4-208ENST00000489554 ERCC8Q13216 396 aa7.69□□□□□ -1.18
SCAMP4-208ENST00000489554 WDR73Q6P4I2 378 aa7.69□□□□□ -1.18
SCAMP4-208ENST00000489554 RASL11AQ6T310 242 aa7.69□□□□□ -1.18
SCAMP4-208ENST00000489554 GOLT1AQ6ZVE7 132 aa7.69□□□□□ -1.18
SCAMP4-208ENST00000489554 TRPT1Q86TN4 253 aaKnown RBP7.69□□□□□ -1.18
SCAMP4-208ENST00000489554 ZNF738Q8NE65 137 aa7.69□□□□□ -1.18
SCAMP4-208ENST00000489554 OR8A1Q8NGG7 326 aa7.69□□□□□ -1.18
SCAMP4-208ENST00000489554 OR11H2Q8NH07 326 aa7.69□□□□□ -1.18
SCAMP4-208ENST00000489554 RPH3ALQ9UNE2 315 aa7.69□□□□□ -1.18
SCAMP4-208ENST00000489554 SACSQ9NZJ4 4579 aa7.69□□□□□ -1.18
SCAMP4-208ENST00000489554 RYR2Q92736 4967 aa7.68□□□□□ -1.18
SCAMP4-208ENST00000489554 TRAV34A0A0B4J273 112 aa7.68□□□□□ -1.18
SCAMP4-208ENST00000489554 RBAKDNA6NC62 111 aa7.68□□□□□ -1.18
SCAMP4-208ENST00000489554 FAM231BA6NCW3 169 aa7.68□□□□□ -1.18
SCAMP4-208ENST00000489554 ZNF705GA8MUZ8 300 aaPredicted RBP7.68□□□□□ -1.18
SCAMP4-208ENST00000489554 S100A8P05109 93 aa7.68□□□□□ -1.18
SCAMP4-208ENST00000489554 CT83Q5H943 113 aa7.68□□□□□ -1.18
SCAMP4-208ENST00000489554 ACTL10Q5JWF8 245 aa7.68□□□□□ -1.18
SCAMP4-208ENST00000489554 SAPCD1Q5SSQ6 148 aa7.68□□□□□ -1.18
SCAMP4-208ENST00000489554 AMTNQ6UX39 209 aa7.68□□□□□ -1.18
SCAMP4-208ENST00000489554 FOXI2Q6ZQN5 318 aa7.68□□□□□ -1.18
SCAMP4-208ENST00000489554 C9orf47Q6ZRZ4 202 aa7.68□□□□□ -1.18
SCAMP4-208ENST00000489554 TMEM183AQ8IXX5 376 aa7.68□□□□□ -1.18
SCAMP4-208ENST00000489554 OR4B1Q8NGF8 309 aa7.68□□□□□ -1.18
SCAMP4-208ENST00000489554 FAM19A4Q96LR4 140 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms