RNA–Protein interactions for RNA: ENST00000489443.2

LMX1A-204, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

TSL 1 (best)

Gene LMX1A, Length 1,255 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-204ENST00000489443 TCTE3Q8IZS6 198 aa11.16□□□□□ -0.62
LMX1A-204ENST00000489443 EIF4E3Q8N5X7 224 aaKnown RBP11.16□□□□□ -0.62
LMX1A-204ENST00000489443 TMED6Q8WW62 240 aa11.16□□□□□ -0.62
LMX1A-204ENST00000489443 NDUFAF3Q9BU61 184 aa11.16□□□□□ -0.62
LMX1A-204ENST00000489443 LENEPQ9Y5L5 61 aa11.16□□□□□ -0.62
LMX1A-204ENST00000489443 HYDINQ4G0P3 5121 aa11.16□□□□□ -0.62
LMX1A-204ENST00000489443 IGHV1OR15-1A0A075B7D0 117 aa11.15□□□□□ -0.62
LMX1A-204ENST00000489443 MAP1LC3B2A6NCE7 125 aa11.15□□□□□ -0.62
LMX1A-204ENST00000489443 GGTLC3B5MD39 225 aa11.15□□□□□ -0.62
LMX1A-204ENST00000489443 TCRAP04437 139 aa11.15□□□□□ -0.62
LMX1A-204ENST00000489443 SEC11BP0C7V7 166 aa11.15□□□□□ -0.62
LMX1A-204ENST00000489443 FHITP49789 147 aa11.15□□□□□ -0.62
LMX1A-204ENST00000489443 SGK494Q96LW2 274 aa11.15□□□□□ -0.62
LMX1A-204ENST00000489443 MAP1LC3BQ9GZQ8 125 aa11.15□□□□□ -0.62
LMX1A-204ENST00000489443 GSN-AS1Q9NRJ2 163 aa11.15□□□□□ -0.62
LMX1A-204ENST00000489443 A0A1W2PRE2 83 aa11.14□□□□□ -0.63
LMX1A-204ENST00000489443 K7EQM0 130 aa11.14□□□□□ -0.63
LMX1A-204ENST00000489443 IFNA7P01567 189 aa11.14□□□□□ -0.63
LMX1A-204ENST00000489443 EIF5AP63241 154 aaKnown RBP11.14□□□□□ -0.63
LMX1A-204ENST00000489443 ANXA2RQ3ZCQ2 193 aa11.14□□□□□ -0.63
LMX1A-204ENST00000489443 ZNF680Q8NEM1 530 aa11.14□□□□□ -0.63
LMX1A-204ENST00000489443 LINC00467Q9BRT7 94 aa11.14□□□□□ -0.63
LMX1A-204ENST00000489443 TREM1Q9NP99 234 aa11.14□□□□□ -0.63
LMX1A-204ENST00000489443 TP53TG3Q9ULZ0 132 aa11.14□□□□□ -0.63
LMX1A-204ENST00000489443 EPDR1Q9UM22 224 aa11.14□□□□□ -0.63
LMX1A-204ENST00000489443 SERTM2A0A1B0GWG4 89 aa11.13□□□□□ -0.63
LMX1A-204ENST00000489443 GAGE12BA1L429 117 aa11.13□□□□□ -0.63
LMX1A-204ENST00000489443 UMAD1C9J7I0 102 aa11.13□□□□□ -0.63
LMX1A-204ENST00000489443 F5H768 121 aa11.13□□□□□ -0.63
LMX1A-204ENST00000489443 GAGE7O76087 117 aa11.13□□□□□ -0.63
LMX1A-204ENST00000489443 ATP5G1P05496 136 aa11.13□□□□□ -0.63
LMX1A-204ENST00000489443 GAGE12FP0CL80 117 aa11.13□□□□□ -0.63
LMX1A-204ENST00000489443 GAGE12GP0CL81 117 aa11.13□□□□□ -0.63
LMX1A-204ENST00000489443 GAGE12IP0CL82 117 aa11.13□□□□□ -0.63
LMX1A-204ENST00000489443 ATP5G3P48201 142 aa11.13□□□□□ -0.63
LMX1A-204ENST00000489443 MUC21Q5SSG8 566 aa11.13□□□□□ -0.63
LMX1A-204ENST00000489443 STOML3Q8TAV4 291 aa11.13□□□□□ -0.63
LMX1A-204ENST00000489443 FAM213BQ8TBF2 198 aa11.13□□□□□ -0.63
LMX1A-204ENST00000489443 TVP23CQ96ET8 276 aa11.13□□□□□ -0.63
LMX1A-204ENST00000489443 FAM210BQ96KR6 192 aa11.13□□□□□ -0.63
LMX1A-204ENST00000489443 F6UZH7 168 aa11.12□□□□□ -0.63
LMX1A-204ENST00000489443 TPT1P13693 172 aaKnown RBP11.12□□□□□ -0.63
LMX1A-204ENST00000489443 DAZ2Q13117 558 aaKnown RBP11.12□□□□□ -0.63
LMX1A-204ENST00000489443 LGALSLQ3ZCW2 172 aaPredicted RBP11.12□□□□□ -0.63
LMX1A-204ENST00000489443 Q6AWC8 147 aa11.12□□□□□ -0.63
LMX1A-204ENST00000489443 TMEM88Q6PEY1 159 aa11.12□□□□□ -0.63
LMX1A-204ENST00000489443 AKAP14Q86UN6 197 aa11.12□□□□□ -0.63
LMX1A-204ENST00000489443 CYB561D1Q8N8Q1 229 aa11.12□□□□□ -0.63
LMX1A-204ENST00000489443 C11orf72Q8NBR9 251 aa11.12□□□□□ -0.63
LMX1A-204ENST00000489443 FAM74A7A6NL05 159 aa11.11□□□□□ -0.63
LMX1A-204ENST00000489443 C1QBP02746 253 aa11.11□□□□□ -0.63
LMX1A-204ENST00000489443 Q6ZTI0 123 aa11.11□□□□□ -0.63
LMX1A-204ENST00000489443 SFT2D1Q8WV19 159 aa11.11□□□□□ -0.63
LMX1A-204ENST00000489443 ATG101Q9BSB4 218 aa11.11□□□□□ -0.63
LMX1A-204ENST00000489443 NDFIP1Q9BT67 221 aa11.11□□□□□ -0.63
LMX1A-204ENST00000489443 NAGKQ9UJ70 344 aa11.11□□□□□ -0.63
LMX1A-204ENST00000489443 PSG8Q9UQ74 426 aa11.11□□□□□ -0.63
LMX1A-204ENST00000489443 KLF12Q9Y4X4 402 aa11.11□□□□□ -0.63
LMX1A-204ENST00000489443 VPS13DQ5THJ4 4388 aa11.1□□□□□ -0.63
LMX1A-204ENST00000489443 TRGV1A0A0A0MS02 117 aa11.1□□□□□ -0.63
LMX1A-204ENST00000489443 A0A1B0GV50 99 aa11.1□□□□□ -0.63
LMX1A-204ENST00000489443 TCL1AP56279 114 aa11.1□□□□□ -0.63
LMX1A-204ENST00000489443 FLI1Q01543 452 aaPredicted RBP11.1□□□□□ -0.63
LMX1A-204ENST00000489443 FAM159AQ6UWV7 190 aa11.1□□□□□ -0.63
LMX1A-204ENST00000489443 PRNTQ86SH4 94 aa11.1□□□□□ -0.63
LMX1A-204ENST00000489443 LINC00612Q8N6U2 182 aa11.1□□□□□ -0.63
LMX1A-204ENST00000489443 LINC00479Q96M42 142 aa11.1□□□□□ -0.63
LMX1A-204ENST00000489443 NKX6-2Q9C056 277 aaPredicted RBP11.1□□□□□ -0.63
LMX1A-204ENST00000489443 KMT2AQ03164 3969 aa11.09□□□□□ -0.63
LMX1A-204ENST00000489443 TRAV34A0A0B4J273 112 aa11.09□□□□□ -0.63
LMX1A-204ENST00000489443 TRAV21A0A0B4J279 112 aa11.09□□□□□ -0.63
LMX1A-204ENST00000489443 IGLV2-11P01706 119 aa11.09□□□□□ -0.63
LMX1A-204ENST00000489443 TMEM183BQ1AE95 376 aa11.09□□□□□ -0.63
LMX1A-204ENST00000489443 IBA57Q5T440 356 aaKnown RBP11.09□□□□□ -0.63
LMX1A-204ENST00000489443 CST9LP1Q5W188 147 aa11.09□□□□□ -0.63
LMX1A-204ENST00000489443 TMEM183AQ8IXX5 376 aa11.09□□□□□ -0.63
LMX1A-204ENST00000489443 TMEM75Q8N9X5 138 aa11.09□□□□□ -0.63
LMX1A-204ENST00000489443 MBD3L1Q8WWY6 194 aa11.09□□□□□ -0.63
LMX1A-204ENST00000489443 C8orf49Q96NF6 230 aa11.09□□□□□ -0.63
LMX1A-204ENST00000489443 TRGV2A0A075B6R0 118 aa11.08□□□□□ -0.64
LMX1A-204ENST00000489443 PEX7O00628 323 aa11.08□□□□□ -0.64
LMX1A-204ENST00000489443 ZNF415Q09FC8 603 aa11.08□□□□□ -0.64
LMX1A-204ENST00000489443 OR5I1Q13606 314 aa11.08□□□□□ -0.64
LMX1A-204ENST00000489443 DPPA3Q6W0C5 159 aa11.08□□□□□ -0.64
LMX1A-204ENST00000489443 MDFICQ9P1T7 246 aa11.08□□□□□ -0.64
LMX1A-204ENST00000489443 FBLL1A6NHQ2 334 aaKnown RBP11.07□□□□□ -0.64
LMX1A-204ENST00000489443 GCGP01275 180 aa11.07□□□□□ -0.64
LMX1A-204ENST00000489443 H2AFB1P0C5Y9 115 aa11.07□□□□□ -0.64
LMX1A-204ENST00000489443 P0DMU3 169 aa11.07□□□□□ -0.64
LMX1A-204ENST00000489443 FAM231AP0DMU4 169 aa11.07□□□□□ -0.64
LMX1A-204ENST00000489443 FAM231CP0DMU5 169 aa11.07□□□□□ -0.64
LMX1A-204ENST00000489443 PPT1P50897 306 aa11.07□□□□□ -0.64
LMX1A-204ENST00000489443 EIF5AL1Q6IS14 154 aaKnown RBP11.07□□□□□ -0.64
LMX1A-204ENST00000489443 HIST1H2BAQ96A08 127 aa11.07□□□□□ -0.64
LMX1A-204ENST00000489443 MRPL16Q9NX20 251 aaKnown RBP11.07□□□□□ -0.64
LMX1A-204ENST00000489443 TRGV11A0A075B6L2 103 aa11.06□□□□□ -0.64
LMX1A-204ENST00000489443 A0A1B0GVG6 124 aa11.06□□□□□ -0.64
LMX1A-204ENST00000489443 GNRH2O43555 120 aa11.06□□□□□ -0.64
LMX1A-204ENST00000489443 SPINK4O60575 86 aa11.06□□□□□ -0.64
LMX1A-204ENST00000489443 PAGE4O60829 102 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms