RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 H3BUX3 64 aa6.49□□□□□ -1.37
VTI1A-207ENST00000489357 M0R3E3 92 aa6.49□□□□□ -1.37
VTI1A-207ENST00000489357 NUPR1O60356 82 aa6.49□□□□□ -1.37
VTI1A-207ENST00000489357 HSBP1O75506 76 aa6.49□□□□□ -1.37
VTI1A-207ENST00000489357 SCGB1D1O95968 90 aa6.49□□□□□ -1.37
VTI1A-207ENST00000489357 SNRPCP09234 159 aaKnown RBP6.49□□□□□ -1.37
VTI1A-207ENST00000489357 FRMD6-AS1P0C7T7 363 aa6.49□□□□□ -1.37
VTI1A-207ENST00000489357 IGHV4-38-2P0DP08 117 aa6.49□□□□□ -1.37
VTI1A-207ENST00000489357 ARL3P36405 182 aa6.49□□□□□ -1.37
VTI1A-207ENST00000489357 CAMPP49913 170 aa6.49□□□□□ -1.37
VTI1A-207ENST00000489357 PMCHL1Q16048 86 aa6.49□□□□□ -1.37
VTI1A-207ENST00000489357 GDF5OSQ5U4N7 250 aa6.49□□□□□ -1.37
VTI1A-207ENST00000489357 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.49□□□□□ -1.37
VTI1A-207ENST00000489357 BRD3OSQ6XYD6 125 aa6.49□□□□□ -1.37
VTI1A-207ENST00000489357 Q6ZWC4 215 aa6.49□□□□□ -1.37
VTI1A-207ENST00000489357 KIR2DL5AQ8N109 375 aa6.49□□□□□ -1.37
VTI1A-207ENST00000489357 PGLYRP4Q96LB8 373 aa6.49□□□□□ -1.37
VTI1A-207ENST00000489357 SGK494Q96LW2 274 aa6.49□□□□□ -1.37
VTI1A-207ENST00000489357 C20orf144Q9BQM9 153 aa6.49□□□□□ -1.37
VTI1A-207ENST00000489357 CNFNQ9BYD5 112 aa6.49□□□□□ -1.37
VTI1A-207ENST00000489357 C20orf202A1L168 122 aa6.48□□□□□ -1.37
VTI1A-207ENST00000489357 K7EMT4 169 aa6.48□□□□□ -1.37
VTI1A-207ENST00000489357 SH2D1AO60880 128 aa6.48□□□□□ -1.37
VTI1A-207ENST00000489357 IGHV3-23P01764 117 aa6.48□□□□□ -1.37
VTI1A-207ENST00000489357 IGHG4P01861 327 aa6.48□□□□□ -1.37
VTI1A-207ENST00000489357 CRIP1P50238 77 aa6.48□□□□□ -1.37
VTI1A-207ENST00000489357 HIST1H1AQ02539 215 aaPredicted RBP6.48□□□□□ -1.37
VTI1A-207ENST00000489357 CFHR3Q02985 330 aa6.48□□□□□ -1.37
VTI1A-207ENST00000489357 C9orf47Q6ZRZ4 202 aa6.48□□□□□ -1.37
VTI1A-207ENST00000489357 TMEM219Q86XT9 240 aa6.48□□□□□ -1.37
VTI1A-207ENST00000489357 BCL6BQ8N143 479 aaPredicted RBP6.48□□□□□ -1.37
VTI1A-207ENST00000489357 ZNF664Q8N3J9 261 aa6.48□□□□□ -1.37
VTI1A-207ENST00000489357 GLMPQ8WWB7 406 aa6.48□□□□□ -1.37
VTI1A-207ENST00000489357 NDUFAF3Q9BU61 184 aa6.48□□□□□ -1.37
VTI1A-207ENST00000489357 NRN1Q9NPD7 142 aa6.48□□□□□ -1.37
VTI1A-207ENST00000489357 LAMTOR2Q9Y2Q5 125 aa6.48□□□□□ -1.37
VTI1A-207ENST00000489357 A0A1B0GUS0 222 aa6.47□□□□□ -1.37
VTI1A-207ENST00000489357 LINC01548A6NM66 108 aa6.47□□□□□ -1.37
VTI1A-207ENST00000489357 PPBPP02775 128 aa6.47□□□□□ -1.37
VTI1A-207ENST00000489357 IGLC6P0CF74 106 aa6.47□□□□□ -1.37
VTI1A-207ENST00000489357 ZNF138P52744 262 aa6.47□□□□□ -1.37
VTI1A-207ENST00000489357 FOXE3Q13461 319 aa6.47□□□□□ -1.37
VTI1A-207ENST00000489357 KIAA1644Q3SXP7 199 aa6.47□□□□□ -1.37
VTI1A-207ENST00000489357 TMEM78Q5T7P6 136 aa6.47□□□□□ -1.37
VTI1A-207ENST00000489357 CLUHP3Q96NS8 147 aa6.47□□□□□ -1.37
VTI1A-207ENST00000489357 RCHY1Q96PM5 261 aa6.47□□□□□ -1.37
VTI1A-207ENST00000489357 IGKV2-40A0A087WW87 121 aaPredicted RBP6.46□□□□□ -1.38
VTI1A-207ENST00000489357 OVOL1O14753 267 aa6.46□□□□□ -1.38
VTI1A-207ENST00000489357 CRXO43186 299 aaPredicted RBP6.46□□□□□ -1.38
VTI1A-207ENST00000489357 IGKV2D-40P01614 121 aaPredicted RBP6.46□□□□□ -1.38
VTI1A-207ENST00000489357 SRD5A1P18405 259 aa6.46□□□□□ -1.38
VTI1A-207ENST00000489357 GPHB5Q86YW7 130 aa6.46□□□□□ -1.38
VTI1A-207ENST00000489357 LINC00477Q96M19 166 aa6.46□□□□□ -1.38
VTI1A-207ENST00000489357 VAMP8Q9BV40 100 aa6.46□□□□□ -1.38
VTI1A-207ENST00000489357 NPFFR1Q9GZQ6 430 aa6.46□□□□□ -1.38
VTI1A-207ENST00000489357 DAZ1Q9NQZ3 744 aaKnown RBP6.46□□□□□ -1.38
VTI1A-207ENST00000489357 U3KQK5 164 aa6.46□□□□□ -1.38
VTI1A-207ENST00000489357 FBN1P35555 2871 aaKnown RBP6.46□□□□□ -1.38
VTI1A-207ENST00000489357 STAB1Q9NY15 2570 aa6.46□□□□□ -1.38
VTI1A-207ENST00000489357 IGHV3OR16-10A0A075B7F0 116 aa6.45□□□□□ -1.38
VTI1A-207ENST00000489357 ZNF705FA8MVS1 300 aaPredicted RBP6.45□□□□□ -1.38
VTI1A-207ENST00000489357 M0R2Z0 102 aa6.45□□□□□ -1.38
VTI1A-207ENST00000489357 ARMS2P0C7Q2 107 aa6.45□□□□□ -1.38
VTI1A-207ENST00000489357 LINC00614P0C842 121 aa6.45□□□□□ -1.38
VTI1A-207ENST00000489357 ZNF705DP0CH99 300 aaPredicted RBP6.45□□□□□ -1.38
VTI1A-207ENST00000489357 ZNF705BP0CI00 300 aaPredicted RBP6.45□□□□□ -1.38
VTI1A-207ENST00000489357 MED14OSP0DP75 135 aa6.45□□□□□ -1.38
VTI1A-207ENST00000489357 BTF3P20290 206 aaKnown RBP6.45□□□□□ -1.38
VTI1A-207ENST00000489357 PSMB8P28062 276 aa6.45□□□□□ -1.38
VTI1A-207ENST00000489357 FAM106AQ4KMX7 169 aa6.45□□□□□ -1.38
VTI1A-207ENST00000489357 C9orf152Q5JTZ5 239 aa6.45□□□□□ -1.38
VTI1A-207ENST00000489357 NIT1Q86X76 327 aa6.45□□□□□ -1.38
VTI1A-207ENST00000489357 KLHDC1Q8N7A1 406 aa6.45□□□□□ -1.38
VTI1A-207ENST00000489357 FER1L6-AS1Q8NA97 138 aa6.45□□□□□ -1.38
VTI1A-207ENST00000489357 C8orf49Q96NF6 230 aa6.45□□□□□ -1.38
VTI1A-207ENST00000489357 VGLL1Q99990 258 aa6.45□□□□□ -1.38
VTI1A-207ENST00000489357 TMEM191AQ9H0A3 160 aa6.45□□□□□ -1.38
VTI1A-207ENST00000489357 VPREB3Q9UKI3 123 aa6.45□□□□□ -1.38
VTI1A-207ENST00000489357 TRAV8-2A0A0B4J237 113 aa6.44□□□□□ -1.38
VTI1A-207ENST00000489357 IGHV7-4-1A0A0J9YVY3 117 aa6.44□□□□□ -1.38
VTI1A-207ENST00000489357 ELANEP08246 267 aa6.44□□□□□ -1.38
VTI1A-207ENST00000489357 PF4V1P10720 104 aa6.44□□□□□ -1.38
VTI1A-207ENST00000489357 KRTDAPP60985 99 aa6.44□□□□□ -1.38
VTI1A-207ENST00000489357 FAM104BQ5XKR9 115 aa6.44□□□□□ -1.38
VTI1A-207ENST00000489357 RNASEKQ6P5S7 137 aaKnown RBP6.44□□□□□ -1.38
VTI1A-207ENST00000489357 LYZL1Q6UWQ5 148 aa6.44□□□□□ -1.38
VTI1A-207ENST00000489357 ORMDL3Q8N138 153 aa6.44□□□□□ -1.38
VTI1A-207ENST00000489357 OR4X2Q8NGF9 303 aa6.44□□□□□ -1.38
VTI1A-207ENST00000489357 C14orf144Q96I85 54 aa6.44□□□□□ -1.38
VTI1A-207ENST00000489357 C16orf92Q96LL3 132 aa6.44□□□□□ -1.38
VTI1A-207ENST00000489357 TMEM70Q9BUB7 260 aa6.44□□□□□ -1.38
VTI1A-207ENST00000489357 PEF1Q9UBV8 284 aaKnown RBP6.44□□□□□ -1.38
VTI1A-207ENST00000489357 HSPB8Q9UJY1 196 aa6.44□□□□□ -1.38
VTI1A-207ENST00000489357 PLA2G2DQ9UNK4 145 aa6.44□□□□□ -1.38
VTI1A-207ENST00000489357 UFC1Q9Y3C8 167 aa6.44□□□□□ -1.38
VTI1A-207ENST00000489357 IGHV4-4A0A075B6R2 117 aa6.43□□□□□ -1.38
VTI1A-207ENST00000489357 IGHV3-35A0A0C4DH35 117 aa6.43□□□□□ -1.38
VTI1A-207ENST00000489357 LGALS9O00182 355 aa6.43□□□□□ -1.38
VTI1A-207ENST00000489357 SOCS3O14543 225 aa6.43□□□□□ -1.38
VTI1A-207ENST00000489357 C3orf79P0CE67 100 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms