RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 BAGE2Q86Y30 109 aa9□□□□□ -0.97
TRAIP-209ENST00000488860 SMIM7Q9BQ49 75 aa9□□□□□ -0.97
TRAIP-209ENST00000488860 TMEM208Q9BTX3 173 aa9□□□□□ -0.97
TRAIP-209ENST00000488860 SMDT1Q9H4I9 107 aa9□□□□□ -0.97
TRAIP-209ENST00000488860 RETNQ9HD89 108 aa9□□□□□ -0.97
TRAIP-209ENST00000488860 TRBV7-9A0A0J9YWB2 115 aa8.99□□□□□ -0.97
TRAIP-209ENST00000488860 PGPEP1LA6NFU8 196 aa8.99□□□□□ -0.97
TRAIP-209ENST00000488860 ZNF727A8MUV8 499 aa8.99□□□□□ -0.97
TRAIP-209ENST00000488860 KLLNB2CW77 178 aa8.99□□□□□ -0.97
TRAIP-209ENST00000488860 UBE2CO00762 179 aa8.99□□□□□ -0.97
TRAIP-209ENST00000488860 CRXO43186 299 aaPredicted RBP8.99□□□□□ -0.97
TRAIP-209ENST00000488860 NDUFS6O75380 124 aaKnown RBP8.99□□□□□ -0.97
TRAIP-209ENST00000488860 GCGP01275 180 aa8.99□□□□□ -0.97
TRAIP-209ENST00000488860 SFTA3P0C7M3 94 aa8.99□□□□□ -0.97
TRAIP-209ENST00000488860 PRR27Q6MZM9 219 aa8.99□□□□□ -0.97
TRAIP-209ENST00000488860 SBSPONQ8IVN8 264 aa8.99□□□□□ -0.97
TRAIP-209ENST00000488860 ZC2HC1AQ96GY0 325 aa8.99□□□□□ -0.97
TRAIP-209ENST00000488860 RCHY1Q96PM5 261 aa8.99□□□□□ -0.97
TRAIP-209ENST00000488860 NIPSNAP3BQ9BS92 247 aa8.99□□□□□ -0.97
TRAIP-209ENST00000488860 ZFP30Q9Y2G7 519 aa8.99□□□□□ -0.97
TRAIP-209ENST00000488860 GOLT1BQ9Y3E0 138 aa8.99□□□□□ -0.97
TRAIP-209ENST00000488860 TRBV20OR9-2A0A075B6H5 130 aa8.98□□□□□ -0.97
TRAIP-209ENST00000488860 RBMY1A1P0DJD3 496 aaKnown RBP8.98□□□□□ -0.97
TRAIP-209ENST00000488860 RBMY1CP0DJD4 496 aa8.98□□□□□ -0.97
TRAIP-209ENST00000488860 RBMY1FQ15415 496 aaKnown RBP8.98□□□□□ -0.97
TRAIP-209ENST00000488860 UQCC3Q6UW78 93 aa8.98□□□□□ -0.97
TRAIP-209ENST00000488860 TMEM183AQ8IXX5 376 aa8.98□□□□□ -0.97
TRAIP-209ENST00000488860 NAGKQ9UJ70 344 aa8.98□□□□□ -0.97
TRAIP-209ENST00000488860 MEGF8Q7Z7M0 2845 aa8.97□□□□□ -0.97
TRAIP-209ENST00000488860 C9JCJ5 164 aa8.97□□□□□ -0.97
TRAIP-209ENST00000488860 ZNF80P51504 273 aaPredicted RBP8.97□□□□□ -0.97
TRAIP-209ENST00000488860 SOHLH1Q5JUK2 328 aa8.97□□□□□ -0.97
TRAIP-209ENST00000488860 MUC21Q5SSG8 566 aa8.97□□□□□ -0.97
TRAIP-209ENST00000488860 Q6ZQT7 251 aa8.97□□□□□ -0.97
TRAIP-209ENST00000488860 LINC01587Q99440 93 aa8.97□□□□□ -0.97
TRAIP-209ENST00000488860 B9D2Q9BPU9 175 aa8.97□□□□□ -0.97
TRAIP-209ENST00000488860 TRAV21A0A0B4J279 112 aa8.96□□□□□ -0.98
TRAIP-209ENST00000488860 SPRY2O43597 315 aa8.96□□□□□ -0.98
TRAIP-209ENST00000488860 SH2D1AO60880 128 aa8.96□□□□□ -0.98
TRAIP-209ENST00000488860 HTN1P15515 57 aa8.96□□□□□ -0.98
TRAIP-209ENST00000488860 Q6AWC8 147 aa8.96□□□□□ -0.98
TRAIP-209ENST00000488860 Q6ZWC4 215 aa8.96□□□□□ -0.98
TRAIP-209ENST00000488860 C1orf158Q8N1D5 194 aa8.96□□□□□ -0.98
TRAIP-209ENST00000488860 CSNK1G2-AS1Q8NCQ2 148 aa8.96□□□□□ -0.98
TRAIP-209ENST00000488860 SPATA25Q9BR10 227 aa8.96□□□□□ -0.98
TRAIP-209ENST00000488860 PRKDCP78527 4128 aaKnown RBP8.95□□□□□ -0.98
TRAIP-209ENST00000488860 IGLV2-8P01709 118 aa8.95□□□□□ -0.98
TRAIP-209ENST00000488860 PFN1P07737 140 aaKnown RBP8.95□□□□□ -0.98
TRAIP-209ENST00000488860 FAM74A3Q4VXF1 159 aa8.95□□□□□ -0.98
TRAIP-209ENST00000488860 FAM162BQ5T6X4 162 aa8.95□□□□□ -0.98
TRAIP-209ENST00000488860 TMEM256Q8N2U0 113 aa8.95□□□□□ -0.98
TRAIP-209ENST00000488860 EIF4E3Q8N5X7 224 aaKnown RBP8.95□□□□□ -0.98
TRAIP-209ENST00000488860 OR11H2Q8NH07 326 aa8.95□□□□□ -0.98
TRAIP-209ENST00000488860 RNF183Q96D59 192 aa8.95□□□□□ -0.98
TRAIP-209ENST00000488860 SMIM12Q96EX1 92 aa8.95□□□□□ -0.98
TRAIP-209ENST00000488860 C20orf144Q9BQM9 153 aa8.95□□□□□ -0.98
TRAIP-209ENST00000488860 ZMAT4Q9H898 229 aa8.95□□□□□ -0.98
TRAIP-209ENST00000488860 DNAH9Q9NYC9 4486 aa8.94□□□□□ -0.98
TRAIP-209ENST00000488860 ZNF705GA8MUZ8 300 aaPredicted RBP8.94□□□□□ -0.98
TRAIP-209ENST00000488860 F8W036 122 aa8.94□□□□□ -0.98
TRAIP-209ENST00000488860 H7BYZ3 331 aa8.94□□□□□ -0.98
TRAIP-209ENST00000488860 K7EN84 100 aa8.94□□□□□ -0.98
TRAIP-209ENST00000488860 ZNF324O75467 553 aaPredicted RBP8.94□□□□□ -0.98
TRAIP-209ENST00000488860 OR5I1Q13606 314 aa8.94□□□□□ -0.98
TRAIP-209ENST00000488860 ADIRFQ15847 76 aa8.94□□□□□ -0.98
TRAIP-209ENST00000488860 TMEM241Q24JQ0 296 aa8.94□□□□□ -0.98
TRAIP-209ENST00000488860 SLC7A5P1Q8MH63 180 aa8.94□□□□□ -0.98
TRAIP-209ENST00000488860 OCC1Q8TAD7 63 aa8.94□□□□□ -0.98
TRAIP-209ENST00000488860 TM2D3Q9BRN9 247 aa8.94□□□□□ -0.98
TRAIP-209ENST00000488860 OVOL2Q9BRP0 275 aa8.94□□□□□ -0.98
TRAIP-209ENST00000488860 MLST8Q9BVC4 326 aa8.94□□□□□ -0.98
TRAIP-209ENST00000488860 NAT8Q9UHE5 227 aa8.94□□□□□ -0.98
TRAIP-209ENST00000488860 IGHV1OR15-1A0A075B7D0 117 aa8.93□□□□□ -0.98
TRAIP-209ENST00000488860 TMEM218A2RU14 115 aa8.93□□□□□ -0.98
TRAIP-209ENST00000488860 CBY3A6NI87 242 aa8.93□□□□□ -0.98
TRAIP-209ENST00000488860 FABP5P3A8MUU1 101 aa8.93□□□□□ -0.98
TRAIP-209ENST00000488860 M0R036 132 aa8.93□□□□□ -0.98
TRAIP-209ENST00000488860 PRM2P04554 102 aa8.93□□□□□ -0.98
TRAIP-209ENST00000488860 ADCYAP1P18509 176 aa8.93□□□□□ -0.98
TRAIP-209ENST00000488860 CRIP1P50238 77 aa8.93□□□□□ -0.98
TRAIP-209ENST00000488860 FAM159AQ6UWV7 190 aa8.93□□□□□ -0.98
TRAIP-209ENST00000488860 ZNF705AQ6ZN79 300 aaPredicted RBP8.93□□□□□ -0.98
TRAIP-209ENST00000488860 COX8CQ7Z4L0 72 aa8.93□□□□□ -0.98
TRAIP-209ENST00000488860 LINC01551Q86U37 167 aa8.93□□□□□ -0.98
TRAIP-209ENST00000488860 DAZAP1Q96EP5 407 aaKnown RBP8.93□□□□□ -0.98
TRAIP-209ENST00000488860 PYGO2Q9BRQ0 406 aa8.93□□□□□ -0.98
TRAIP-209ENST00000488860 BIN3Q9NQY0 253 aa8.93□□□□□ -0.98
TRAIP-209ENST00000488860 TP53TG1Q9Y2A0 90 aa8.93□□□□□ -0.98
TRAIP-209ENST00000488860 HUWE1Q7Z6Z7 4374 aaKnown RBP8.93□□□□□ -0.98
TRAIP-209ENST00000488860 TMSB15BA0A087X1C1 80 aa8.92□□□□□ -0.98
TRAIP-209ENST00000488860 ORM1P02763 201 aa8.92□□□□□ -0.98
TRAIP-209ENST00000488860 RPL23P62829 140 aaKnown RBP8.92□□□□□ -0.98
TRAIP-209ENST00000488860 NDUFA5Q16718 116 aa8.92□□□□□ -0.98
TRAIP-209ENST00000488860 RRN3P1Q2M238 152 aa8.92□□□□□ -0.98
TRAIP-209ENST00000488860 ANXA2RQ3ZCQ2 193 aa8.92□□□□□ -0.98
TRAIP-209ENST00000488860 RNASE7Q9H1E1 156 aaKnown RBP8.92□□□□□ -0.98
TRAIP-209ENST00000488860 C11orf21Q9P2W6 132 aa8.92□□□□□ -0.98
TRAIP-209ENST00000488860 LY96Q9Y6Y9 160 aa8.92□□□□□ -0.98
TRAIP-209ENST00000488860 X6R8D5 127 aa8.92□□□□□ -0.98
TRAIP-209ENST00000488860 B4DEV8 164 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms