RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 GPX1P07203 203 aa13.3□□□□□ -0.28
PTCD3-217ENST00000488801 UBE2G2P60604 165 aa13.3□□□□□ -0.28
PTCD3-217ENST00000488801 FAM222AQ5U5X8 452 aa13.3□□□□□ -0.28
PTCD3-217ENST00000488801 CEMP1Q6PRD7 247 aaPredicted RBP13.3□□□□□ -0.28
PTCD3-217ENST00000488801 ZNF493Q6ZR52 646 aa13.3□□□□□ -0.28
PTCD3-217ENST00000488801 CYB561D1Q8N8Q1 229 aa13.3□□□□□ -0.28
PTCD3-217ENST00000488801 TMEM75Q8N9X5 138 aa13.3□□□□□ -0.28
PTCD3-217ENST00000488801 PHLDA1Q8WV24 401 aaPredicted RBP13.3□□□□□ -0.28
PTCD3-217ENST00000488801 C16orf74Q96GX8 76 aa13.3□□□□□ -0.28
PTCD3-217ENST00000488801 ATG101Q9BSB4 218 aa13.3□□□□□ -0.28
PTCD3-217ENST00000488801 SPART-AS1P0CW21 52 aa13.29□□□□□ -0.28
PTCD3-217ENST00000488801 Q6ZQT7 251 aa13.29□□□□□ -0.28
PTCD3-217ENST00000488801 Q6ZTC4 211 aa13.29□□□□□ -0.28
PTCD3-217ENST00000488801 SFT2D1Q8WV19 159 aa13.29□□□□□ -0.28
PTCD3-217ENST00000488801 H2AFB1P0C5Y9 115 aa13.28□□□□□ -0.28
PTCD3-217ENST00000488801 RNASE4P34096 147 aaKnown RBP13.28□□□□□ -0.28
PTCD3-217ENST00000488801 NKX2-5P52952 324 aaPredicted RBP13.28□□□□□ -0.28
PTCD3-217ENST00000488801 TCEAL7Q9BRU2 100 aa13.28□□□□□ -0.28
PTCD3-217ENST00000488801 FBLL1A6NHQ2 334 aaKnown RBP13.27□□□□□ -0.29
PTCD3-217ENST00000488801 LYRM9A8MSI8 78 aa13.27□□□□□ -0.29
PTCD3-217ENST00000488801 C11orf94C9JXX5 98 aa13.27□□□□□ -0.29
PTCD3-217ENST00000488801 EMP1P54849 157 aa13.27□□□□□ -0.29
PTCD3-217ENST00000488801 ANXA2RQ3ZCQ2 193 aa13.27□□□□□ -0.29
PTCD3-217ENST00000488801 LINC00612Q8N6U2 182 aa13.27□□□□□ -0.29
PTCD3-217ENST00000488801 C11orf72Q8NBR9 251 aa13.27□□□□□ -0.29
PTCD3-217ENST00000488801 HIST1H2BAQ96A08 127 aa13.27□□□□□ -0.29
PTCD3-217ENST00000488801 K7EQM0 130 aa13.26□□□□□ -0.29
PTCD3-217ENST00000488801 PEX7O00628 323 aa13.26□□□□□ -0.29
PTCD3-217ENST00000488801 FLI1Q01543 452 aaPredicted RBP13.26□□□□□ -0.29
PTCD3-217ENST00000488801 PSG8Q9UQ74 426 aa13.26□□□□□ -0.29
PTCD3-217ENST00000488801 ATP5G3P48201 142 aa13.25□□□□□ -0.29
PTCD3-217ENST00000488801 ZNF767PQ75MW2 155 aa13.25□□□□□ -0.29
PTCD3-217ENST00000488801 EIF4E3Q8N5X7 224 aaKnown RBP13.25□□□□□ -0.29
PTCD3-217ENST00000488801 SGK494Q96LW2 274 aa13.25□□□□□ -0.29
PTCD3-217ENST00000488801 TRAV10A0A0B4J240 114 aa13.24□□□□□ -0.29
PTCD3-217ENST00000488801 PAGE4O60829 102 aa13.24□□□□□ -0.29
PTCD3-217ENST00000488801 HTN1P15515 57 aa13.24□□□□□ -0.29
PTCD3-217ENST00000488801 PPT1P50897 306 aa13.24□□□□□ -0.29
PTCD3-217ENST00000488801 TDRG1Q3Y452 100 aa13.24□□□□□ -0.29
PTCD3-217ENST00000488801 Q86TA4 180 aa13.24□□□□□ -0.29
PTCD3-217ENST00000488801 ZNF680Q8NEM1 530 aa13.24□□□□□ -0.29
PTCD3-217ENST00000488801 TREM1Q9NP99 234 aa13.24□□□□□ -0.29
PTCD3-217ENST00000488801 KLF12Q9Y4X4 402 aa13.24□□□□□ -0.29
PTCD3-217ENST00000488801 IGHV1OR15-1A0A075B7D0 117 aa13.23□□□□□ -0.29
PTCD3-217ENST00000488801 A0A1B0GV50 99 aa13.23□□□□□ -0.29
PTCD3-217ENST00000488801 F6UZH7 168 aa13.23□□□□□ -0.29
PTCD3-217ENST00000488801 IFNA7P01567 189 aa13.23□□□□□ -0.29
PTCD3-217ENST00000488801 CCL20P78556 96 aa13.23□□□□□ -0.29
PTCD3-217ENST00000488801 IBA57Q5T440 356 aaKnown RBP13.23□□□□□ -0.29
PTCD3-217ENST00000488801 LINC00479Q96M42 142 aa13.23□□□□□ -0.29
PTCD3-217ENST00000488801 C8orf49Q96NF6 230 aa13.23□□□□□ -0.29
PTCD3-217ENST00000488801 KLK5Q9Y337 293 aaPredicted RBP13.23□□□□□ -0.29
PTCD3-217ENST00000488801 BOLA1Q9Y3E2 137 aa13.23□□□□□ -0.29
PTCD3-217ENST00000488801 TIMM8BQ9Y5J9 83 aaPredicted RBP13.23□□□□□ -0.29
PTCD3-217ENST00000488801 TRBV6-1A0A0K0K1D8 114 aa13.22□□□□□ -0.29
PTCD3-217ENST00000488801 DAZ2Q13117 558 aaKnown RBP13.22□□□□□ -0.29
PTCD3-217ENST00000488801 COX8CQ7Z4L0 72 aa13.22□□□□□ -0.29
PTCD3-217ENST00000488801 NDFIP1Q9BT67 221 aa13.22□□□□□ -0.29
PTCD3-217ENST00000488801 MANBALQ9NQG1 85 aa13.22□□□□□ -0.29
PTCD3-217ENST00000488801 RYR2Q92736 4967 aa13.22□□□□□ -0.29
PTCD3-217ENST00000488801 TRAV34A0A0B4J273 112 aa13.21□□□□□ -0.29
PTCD3-217ENST00000488801 RGS13O14921 159 aa13.21□□□□□ -0.29
PTCD3-217ENST00000488801 ZNF80P51504 273 aaPredicted RBP13.21□□□□□ -0.29
PTCD3-217ENST00000488801 TCL1AP56279 114 aa13.21□□□□□ -0.29
PTCD3-217ENST00000488801 CST9LP1Q5W188 147 aa13.21□□□□□ -0.29
PTCD3-217ENST00000488801 ALKAL2Q6UX46 152 aa13.21□□□□□ -0.29
PTCD3-217ENST00000488801 C2CD4CQ8TF44 421 aa13.21□□□□□ -0.29
PTCD3-217ENST00000488801 NOP10Q9NPE3 64 aaKnown RBP13.21□□□□□ -0.29
PTCD3-217ENST00000488801 TP53TG3Q9ULZ0 132 aa13.21□□□□□ -0.29
PTCD3-217ENST00000488801 RYR3Q15413 4870 aa13.21□□□□□ -0.3
PTCD3-217ENST00000488801 DEFB131BA0A096LNP1 70 aa13.2□□□□□ -0.3
PTCD3-217ENST00000488801 TRAV21A0A0B4J279 112 aa13.2□□□□□ -0.3
PTCD3-217ENST00000488801 LCE6AA0A183 80 aa13.2□□□□□ -0.3
PTCD3-217ENST00000488801 DAD1P61803 113 aa13.2□□□□□ -0.3
PTCD3-217ENST00000488801 PRNTQ86SH4 94 aa13.2□□□□□ -0.3
PTCD3-217ENST00000488801 FMC1Q96HJ9 113 aa13.2□□□□□ -0.3
PTCD3-217ENST00000488801 VPS13DQ5THJ4 4388 aa13.19□□□□□ -0.3
PTCD3-217ENST00000488801 CBY3A6NI87 242 aa13.19□□□□□ -0.3
PTCD3-217ENST00000488801 TCTAP57738 103 aa13.19□□□□□ -0.3
PTCD3-217ENST00000488801 TMEM183BQ1AE95 376 aa13.19□□□□□ -0.3
PTCD3-217ENST00000488801 SAPCD1Q5SSQ6 148 aa13.19□□□□□ -0.3
PTCD3-217ENST00000488801 LYPD6BQ8NI32 183 aa13.19□□□□□ -0.3
PTCD3-217ENST00000488801 C11orf52Q96A22 123 aa13.19□□□□□ -0.3
PTCD3-217ENST00000488801 GSN-AS1Q9NRJ2 163 aa13.19□□□□□ -0.3
PTCD3-217ENST00000488801 C11orf21Q9P2W6 132 aa13.19□□□□□ -0.3
PTCD3-217ENST00000488801 DNAH6Q9C0G6 4158 aa13.18□□□□□ -0.3
PTCD3-217ENST00000488801 SCO2A0A1W2PP80 73 aa13.18□□□□□ -0.3
PTCD3-217ENST00000488801 SNURFLB1AK76 121 aa13.18□□□□□ -0.3
PTCD3-217ENST00000488801 GCGP01275 180 aa13.18□□□□□ -0.3
PTCD3-217ENST00000488801 LTAP01374 205 aa13.18□□□□□ -0.3
PTCD3-217ENST00000488801 PFN1P07737 140 aaKnown RBP13.18□□□□□ -0.3
PTCD3-217ENST00000488801 SMUG1Q53HV7 270 aa13.18□□□□□ -0.3
PTCD3-217ENST00000488801 MUC21Q5SSG8 566 aa13.18□□□□□ -0.3
PTCD3-217ENST00000488801 C18orf15Q96N68 181 aa13.18□□□□□ -0.3
PTCD3-217ENST00000488801 TXNDC17Q9BRA2 123 aa13.18□□□□□ -0.3
PTCD3-217ENST00000488801 HYDINQ4G0P3 5121 aa13.17□□□□□ -0.3
PTCD3-217ENST00000488801 TEX46H3BTG2 121 aa13.17□□□□□ -0.3
PTCD3-217ENST00000488801 SPINK4O60575 86 aa13.17□□□□□ -0.3
PTCD3-217ENST00000488801 GNG13Q9P2W3 67 aa13.17□□□□□ -0.3
PTCD3-217ENST00000488801 APLNQ9ULZ1 77 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms