RNA–Protein interactions for RNA: ENST00000488321.1

TRIM54-204, Transcript of tripartite motif containing 54, humanhuman

TSL 2

Gene TRIM54, Length 560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-204ENST00000488321 ANXA2RQ3ZCQ2 193 aa10.56□□□□□ -0.72
TRIM54-204ENST00000488321 MUC21Q5SSG8 566 aa10.56□□□□□ -0.72
TRIM54-204ENST00000488321 TP53TG3Q9ULZ0 132 aa10.56□□□□□ -0.72
TRIM54-204ENST00000488321 LENEPQ9Y5L5 61 aa10.56□□□□□ -0.72
TRIM54-204ENST00000488321 VPS13DQ5THJ4 4388 aa10.56□□□□□ -0.72
TRIM54-204ENST00000488321 CTXND1A0A1B0GTU2 59 aa10.55□□□□□ -0.72
TRIM54-204ENST00000488321 SUMO1P63165 101 aaKnown RBP10.55□□□□□ -0.72
TRIM54-204ENST00000488321 DAZ2Q13117 558 aaKnown RBP10.55□□□□□ -0.72
TRIM54-204ENST00000488321 OR5I1Q13606 314 aa10.55□□□□□ -0.72
TRIM54-204ENST00000488321 ZNF726P1Q15940 193 aa10.55□□□□□ -0.72
TRIM54-204ENST00000488321 Q6ZTI0 123 aa10.55□□□□□ -0.72
TRIM54-204ENST00000488321 KCNRGQ8N5I3 272 aa10.55□□□□□ -0.72
TRIM54-204ENST00000488321 ARL6IP6Q8N6S5 226 aa10.55□□□□□ -0.72
TRIM54-204ENST00000488321 POM121L12Q8N7R1 296 aa10.55□□□□□ -0.72
TRIM54-204ENST00000488321 C15orf53Q8NAA6 179 aa10.55□□□□□ -0.72
TRIM54-204ENST00000488321 C5orf17Q8NAS9 161 aa10.55□□□□□ -0.72
TRIM54-204ENST00000488321 OR11H4Q8NGC9 324 aa10.55□□□□□ -0.72
TRIM54-204ENST00000488321 TMED6Q8WW62 240 aa10.55□□□□□ -0.72
TRIM54-204ENST00000488321 SGK494Q96LW2 274 aa10.55□□□□□ -0.72
TRIM54-204ENST00000488321 TRGV2A0A075B6R0 118 aa10.54□□□□□ -0.72
TRIM54-204ENST00000488321 TRGV1A0A0A0MS02 117 aa10.54□□□□□ -0.72
TRIM54-204ENST00000488321 F6UZH7 168 aa10.54□□□□□ -0.72
TRIM54-204ENST00000488321 K7EQM0 130 aa10.54□□□□□ -0.72
TRIM54-204ENST00000488321 NUDT3O95989 172 aa10.54□□□□□ -0.72
TRIM54-204ENST00000488321 TCRAP04437 139 aa10.54□□□□□ -0.72
TRIM54-204ENST00000488321 FGF8P55075 233 aaPredicted RBP10.54□□□□□ -0.72
TRIM54-204ENST00000488321 ZNF345Q14585 488 aa10.54□□□□□ -0.72
TRIM54-204ENST00000488321 LINC00612Q8N6U2 182 aa10.54□□□□□ -0.72
TRIM54-204ENST00000488321 C11orf72Q8NBR9 251 aa10.54□□□□□ -0.72
TRIM54-204ENST00000488321 SUN5Q8TC36 379 aa10.54□□□□□ -0.72
TRIM54-204ENST00000488321 TREM1Q9NP99 234 aa10.54□□□□□ -0.72
TRIM54-204ENST00000488321 NAGKQ9UJ70 344 aa10.54□□□□□ -0.72
TRIM54-204ENST00000488321 KLF12Q9Y4X4 402 aa10.54□□□□□ -0.72
TRIM54-204ENST00000488321 SERTM2A0A1B0GWG4 89 aa10.53□□□□□ -0.72
TRIM54-204ENST00000488321 KANTRA0A1W2PQU2 76 aa10.53□□□□□ -0.72
TRIM54-204ENST00000488321 HMSDA8MTL9 139 aa10.53□□□□□ -0.72
TRIM54-204ENST00000488321 GGTLC3B5MD39 225 aa10.53□□□□□ -0.72
TRIM54-204ENST00000488321 TCL1AP56279 114 aa10.53□□□□□ -0.72
TRIM54-204ENST00000488321 UBE2G2P60604 165 aa10.53□□□□□ -0.72
TRIM54-204ENST00000488321 IBA57Q5T440 356 aaKnown RBP10.53□□□□□ -0.72
TRIM54-204ENST00000488321 Q6AWC8 147 aa10.53□□□□□ -0.72
TRIM54-204ENST00000488321 FAM159AQ6UWV7 190 aa10.53□□□□□ -0.72
TRIM54-204ENST00000488321 NDFIP1Q9BT67 221 aa10.53□□□□□ -0.72
TRIM54-204ENST00000488321 ZNF471Q9BX82 626 aaPredicted RBP10.53□□□□□ -0.72
TRIM54-204ENST00000488321 TMPRSS5Q9H3S3 457 aa10.53□□□□□ -0.72
TRIM54-204ENST00000488321 EPPK1P58107 5090 aaKnown RBP10.52□□□□□ -0.73
TRIM54-204ENST00000488321 A0A0D9SG52 128 aa10.52□□□□□ -0.73
TRIM54-204ENST00000488321 MAP1LC3B2A6NCE7 125 aa10.52□□□□□ -0.73
TRIM54-204ENST00000488321 ZNF415Q09FC8 603 aa10.52□□□□□ -0.73
TRIM54-204ENST00000488321 ATG101Q9BSB4 218 aa10.52□□□□□ -0.73
TRIM54-204ENST00000488321 MAP1LC3BQ9GZQ8 125 aa10.52□□□□□ -0.73
TRIM54-204ENST00000488321 EPDR1Q9UM22 224 aa10.52□□□□□ -0.73
TRIM54-204ENST00000488321 TRAV26-1A0A087WT03 109 aa10.51□□□□□ -0.73
TRIM54-204ENST00000488321 TRAV21A0A0B4J279 112 aa10.51□□□□□ -0.73
TRIM54-204ENST00000488321 A0A0J9YY99 117 aa10.51□□□□□ -0.73
TRIM54-204ENST00000488321 A0A1W2PRE2 83 aa10.51□□□□□ -0.73
TRIM54-204ENST00000488321 BCL2L11O43521 198 aa10.51□□□□□ -0.73
TRIM54-204ENST00000488321 PFDN1O60925 122 aa10.51□□□□□ -0.73
TRIM54-204ENST00000488321 IFNA7P01567 189 aa10.51□□□□□ -0.73
TRIM54-204ENST00000488321 TMEM183BQ1AE95 376 aa10.51□□□□□ -0.73
TRIM54-204ENST00000488321 TMEM183AQ8IXX5 376 aa10.51□□□□□ -0.73
TRIM54-204ENST00000488321 CYB561D1Q8N8Q1 229 aa10.51□□□□□ -0.73
TRIM54-204ENST00000488321 TVP23CQ96ET8 276 aa10.51□□□□□ -0.73
TRIM54-204ENST00000488321 MRPL16Q9NX20 251 aaKnown RBP10.51□□□□□ -0.73
TRIM54-204ENST00000488321 PSG8Q9UQ74 426 aa10.51□□□□□ -0.73
TRIM54-204ENST00000488321 TRGV11A0A075B6L2 103 aa10.5□□□□□ -0.73
TRIM54-204ENST00000488321 SPINK4O60575 86 aa10.5□□□□□ -0.73
TRIM54-204ENST00000488321 HOXA5P20719 270 aa10.5□□□□□ -0.73
TRIM54-204ENST00000488321 PRNTQ86SH4 94 aa10.5□□□□□ -0.73
TRIM54-204ENST00000488321 STOML3Q8TAV4 291 aa10.5□□□□□ -0.73
TRIM54-204ENST00000488321 KMT2AQ03164 3969 aa10.49□□□□□ -0.73
TRIM54-204ENST00000488321 IGLV2-18A0A075B6J9 118 aa10.49□□□□□ -0.73
TRIM54-204ENST00000488321 M0R2N4 97 aa10.49□□□□□ -0.73
TRIM54-204ENST00000488321 IGHV3-53P01767 116 aa10.49□□□□□ -0.73
TRIM54-204ENST00000488321 FHITP49789 147 aa10.49□□□□□ -0.73
TRIM54-204ENST00000488321 FLI1Q01543 452 aaPredicted RBP10.49□□□□□ -0.73
TRIM54-204ENST00000488321 RNF212Q495C1 297 aa10.49□□□□□ -0.73
TRIM54-204ENST00000488321 ZFP69Q49AA0 526 aa10.49□□□□□ -0.73
TRIM54-204ENST00000488321 MDFICQ9P1T7 246 aa10.49□□□□□ -0.73
TRIM54-204ENST00000488321 SEC11BP0C7V7 166 aa10.48□□□□□ -0.73
TRIM54-204ENST00000488321 EIF5AP63241 154 aaKnown RBP10.48□□□□□ -0.73
TRIM54-204ENST00000488321 LGALS9BQ3B8N2 356 aa10.48□□□□□ -0.73
TRIM54-204ENST00000488321 TMUB2Q71RG4 321 aa10.48□□□□□ -0.73
TRIM54-204ENST00000488321 TMEM75Q8N9X5 138 aa10.48□□□□□ -0.73
TRIM54-204ENST00000488321 FAM213BQ8TBF2 198 aa10.48□□□□□ -0.73
TRIM54-204ENST00000488321 C8orf49Q96NF6 230 aa10.48□□□□□ -0.73
TRIM54-204ENST00000488321 TRAV34A0A0B4J273 112 aa10.47□□□□□ -0.73
TRIM54-204ENST00000488321 FAM74A7A6NL05 159 aa10.47□□□□□ -0.73
TRIM54-204ENST00000488321 UMAD1C9J7I0 102 aa10.47□□□□□ -0.73
TRIM54-204ENST00000488321 GNRH2O43555 120 aa10.47□□□□□ -0.73
TRIM54-204ENST00000488321 GCGP01275 180 aa10.47□□□□□ -0.73
TRIM54-204ENST00000488321 IGLV2-11P01706 119 aa10.47□□□□□ -0.73
TRIM54-204ENST00000488321 PPT1P50897 306 aa10.47□□□□□ -0.73
TRIM54-204ENST00000488321 CCL18P55774 89 aa10.47□□□□□ -0.73
TRIM54-204ENST00000488321 TDRG1Q3Y452 100 aa10.47□□□□□ -0.73
TRIM54-204ENST00000488321 LINC00479Q96M42 142 aa10.47□□□□□ -0.73
TRIM54-204ENST00000488321 C18orf15Q96N68 181 aa10.47□□□□□ -0.73
TRIM54-204ENST00000488321 NKX6-2Q9C056 277 aaPredicted RBP10.47□□□□□ -0.73
TRIM54-204ENST00000488321 SDF2L1Q9HCN8 221 aa10.47□□□□□ -0.73
TRIM54-204ENST00000488321 A0A1B0GV50 99 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms