RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 TRGV2A0A075B6R0 118 aa14.3□□□□□ -0.12
HDAC4-209ENST00000487617 TRGV1A0A0A0MS02 117 aa14.3□□□□□ -0.12
HDAC4-209ENST00000487617 BORCS7-ASMTA0A0B4J1R7 106 aa14.3□□□□□ -0.12
HDAC4-209ENST00000487617 STAG3L2P0CL84 134 aa14.3□□□□□ -0.12
HDAC4-209ENST00000487617 STAG3L3P0CL85 134 aa14.3□□□□□ -0.12
HDAC4-209ENST00000487617 TCL1AP56279 114 aa14.3□□□□□ -0.12
HDAC4-209ENST00000487617 LGALS9BQ3B8N2 356 aa14.3□□□□□ -0.12
HDAC4-209ENST00000487617 IBA57Q5T440 356 aaKnown RBP14.3□□□□□ -0.12
HDAC4-209ENST00000487617 GOLT1AQ6ZVE7 132 aa14.3□□□□□ -0.12
HDAC4-209ENST00000487617 TMED6Q8WW62 240 aa14.3□□□□□ -0.12
HDAC4-209ENST00000487617 TMPRSS5Q9H3S3 457 aa14.3□□□□□ -0.12
HDAC4-209ENST00000487617 TRAV26-1A0A087WT03 109 aa14.29□□□□□ -0.12
HDAC4-209ENST00000487617 HOXA5P20719 270 aa14.29□□□□□ -0.12
HDAC4-209ENST00000487617 GCHFRP30047 84 aa14.29□□□□□ -0.12
HDAC4-209ENST00000487617 FAM3BP58499 235 aaPredicted RBP14.29□□□□□ -0.12
HDAC4-209ENST00000487617 ARL6IP6Q8N6S5 226 aa14.29□□□□□ -0.12
HDAC4-209ENST00000487617 GNPNAT1Q96EK6 184 aaPredicted RBP14.29□□□□□ -0.12
HDAC4-209ENST00000487617 A0A0J9YY99 117 aa14.28□□□□□ -0.12
HDAC4-209ENST00000487617 GNG5P63218 68 aa14.28□□□□□ -0.12
HDAC4-209ENST00000487617 MUC21Q5SSG8 566 aa14.28□□□□□ -0.12
HDAC4-209ENST00000487617 ACTR3CQ9C0K3 210 aaPredicted RBP14.28□□□□□ -0.12
HDAC4-209ENST00000487617 G3V3Q6 166 aa14.27□□□□□ -0.13
HDAC4-209ENST00000487617 SPINK4O60575 86 aa14.27□□□□□ -0.13
HDAC4-209ENST00000487617 CCL18P55774 89 aa14.27□□□□□ -0.13
HDAC4-209ENST00000487617 Q6AWC8 147 aa14.27□□□□□ -0.13
HDAC4-209ENST00000487617 LINC00336Q6ZUF6 198 aa14.27□□□□□ -0.13
HDAC4-209ENST00000487617 ST6GAL2Q96JF0 529 aa14.27□□□□□ -0.13
HDAC4-209ENST00000487617 TRAV8-1A0A0A6YYK1 113 aa14.26□□□□□ -0.13
HDAC4-209ENST00000487617 CXorf1O96002 111 aa14.26□□□□□ -0.13
HDAC4-209ENST00000487617 ZNF415Q09FC8 603 aa14.26□□□□□ -0.13
HDAC4-209ENST00000487617 C18orf15Q96N68 181 aa14.26□□□□□ -0.13
HDAC4-209ENST00000487617 DNAH6Q9C0G6 4158 aa14.25□□□□□ -0.13
HDAC4-209ENST00000487617 ARPC5O15511 151 aa14.25□□□□□ -0.13
HDAC4-209ENST00000487617 Q6ZR54 194 aa14.25□□□□□ -0.13
HDAC4-209ENST00000487617 IQCF2Q8IXL9 164 aa14.25□□□□□ -0.13
HDAC4-209ENST00000487617 SUN5Q8TC36 379 aa14.25□□□□□ -0.13
HDAC4-209ENST00000487617 TMEM167BQ9NRX6 74 aa14.25□□□□□ -0.13
HDAC4-209ENST00000487617 MRPL16Q9NX20 251 aaKnown RBP14.25□□□□□ -0.13
HDAC4-209ENST00000487617 FAM159AQ6UWV7 190 aa14.24□□□□□ -0.13
HDAC4-209ENST00000487617 SSX7Q7RTT5 188 aa14.24□□□□□ -0.13
HDAC4-209ENST00000487617 C5orf17Q8NAS9 161 aa14.24□□□□□ -0.13
HDAC4-209ENST00000487617 TREM1Q9NP99 234 aa14.24□□□□□ -0.13
HDAC4-209ENST00000487617 NAGKQ9UJ70 344 aa14.24□□□□□ -0.13
HDAC4-209ENST00000487617 LINC00588Q9Y4M8 146 aa14.24□□□□□ -0.13
HDAC4-209ENST00000487617 SERTM2A0A1B0GWG4 89 aa14.23□□□□□ -0.13
HDAC4-209ENST00000487617 F6UZH7 168 aa14.23□□□□□ -0.13
HDAC4-209ENST00000487617 H3BNG1 76 aa14.23□□□□□ -0.13
HDAC4-209ENST00000487617 TAAR5O14804 337 aa14.23□□□□□ -0.13
HDAC4-209ENST00000487617 TMEM183BQ1AE95 376 aa14.23□□□□□ -0.13
HDAC4-209ENST00000487617 TMEM183AQ8IXX5 376 aa14.23□□□□□ -0.13
HDAC4-209ENST00000487617 TVP23CQ96ET8 276 aa14.23□□□□□ -0.13
HDAC4-209ENST00000487617 SGK494Q96LW2 274 aa14.23□□□□□ -0.13
HDAC4-209ENST00000487617 MDFICQ9P1T7 246 aa14.23□□□□□ -0.13
HDAC4-209ENST00000487617 DNAH10Q8IVF4 4471 aa14.22□□□□□ -0.13
HDAC4-209ENST00000487617 FRAS1Q86XX4 4008 aa14.22□□□□□ -0.13
HDAC4-209ENST00000487617 TRGV11A0A075B6L2 103 aa14.22□□□□□ -0.13
HDAC4-209ENST00000487617 SMLR1H3BR10 107 aa14.22□□□□□ -0.13
HDAC4-209ENST00000487617 RTL8CO15255 209 aa14.22□□□□□ -0.13
HDAC4-209ENST00000487617 IGHV3-53P01767 116 aa14.22□□□□□ -0.13
HDAC4-209ENST00000487617 TCRAP04437 139 aa14.22□□□□□ -0.13
HDAC4-209ENST00000487617 SUMO1P63165 101 aaKnown RBP14.22□□□□□ -0.13
HDAC4-209ENST00000487617 ZNRF2Q8NHG8 242 aa14.22□□□□□ -0.13
HDAC4-209ENST00000487617 TRAV21A0A0B4J279 112 aa14.21□□□□□ -0.13
HDAC4-209ENST00000487617 CTXND1A0A1B0GTU2 59 aa14.21□□□□□ -0.13
HDAC4-209ENST00000487617 K7EQM0 130 aa14.21□□□□□ -0.13
HDAC4-209ENST00000487617 ZNF726P1Q15940 193 aa14.21□□□□□ -0.13
HDAC4-209ENST00000487617 AKR1C8PQ5T2L2 129 aa14.21□□□□□ -0.13
HDAC4-209ENST00000487617 NDFIP1Q9BT67 221 aa14.21□□□□□ -0.13
HDAC4-209ENST00000487617 NACAE9PAV3 2078 aa14.21□□□□□ -0.14
HDAC4-209ENST00000487617 PRSS29PA6NIE9 313 aa14.2□□□□□ -0.14
HDAC4-209ENST00000487617 GGTLC3B5MD39 225 aa14.2□□□□□ -0.14
HDAC4-209ENST00000487617 VSIG2Q96IQ7 327 aa14.2□□□□□ -0.14
HDAC4-209ENST00000487617 CYTL1Q9NRR1 136 aa14.2□□□□□ -0.14
HDAC4-209ENST00000487617 EPDR1Q9UM22 224 aa14.2□□□□□ -0.14
HDAC4-209ENST00000487617 TDRG1Q3Y452 100 aa14.19□□□□□ -0.14
HDAC4-209ENST00000487617 SOHLH1Q5JUK2 328 aa14.19□□□□□ -0.14
HDAC4-209ENST00000487617 SPXQ9BT56 116 aa14.19□□□□□ -0.14
HDAC4-209ENST00000487617 PSG8Q9UQ74 426 aa14.19□□□□□ -0.14
HDAC4-209ENST00000487617 A0A1W2PRE2 83 aa14.18□□□□□ -0.14
HDAC4-209ENST00000487617 GNRH2O43555 120 aa14.18□□□□□ -0.14
HDAC4-209ENST00000487617 C1orf134Q5TEV5 83 aa14.18□□□□□ -0.14
HDAC4-209ENST00000487617 NBDYA0A0U1RRE5 68 aa14.17□□□□□ -0.14
HDAC4-209ENST00000487617 PAX4O43316 350 aa14.17□□□□□ -0.14
HDAC4-209ENST00000487617 FGF8P55075 233 aaPredicted RBP14.17□□□□□ -0.14
HDAC4-209ENST00000487617 ESRGQ1W209 222 aa14.17□□□□□ -0.14
HDAC4-209ENST00000487617 CYB561D1Q8N8Q1 229 aa14.17□□□□□ -0.14
HDAC4-209ENST00000487617 C8orf49Q96NF6 230 aa14.17□□□□□ -0.14
HDAC4-209ENST00000487617 SDF2L1Q9HCN8 221 aa14.17□□□□□ -0.14
HDAC4-209ENST00000487617 A0A096LPF7 62 aa14.16□□□□□ -0.14
HDAC4-209ENST00000487617 UBE2G2P60604 165 aa14.16□□□□□ -0.14
HDAC4-209ENST00000487617 FLI1Q01543 452 aaPredicted RBP14.16□□□□□ -0.14
HDAC4-209ENST00000487617 PRNTQ86SH4 94 aa14.16□□□□□ -0.14
HDAC4-209ENST00000487617 PRO0255Q9UI72 69 aa14.16□□□□□ -0.14
HDAC4-209ENST00000487617 IGHV3-16A0A0C4DH30 117 aa14.15□□□□□ -0.14
HDAC4-209ENST00000487617 IFNA7P01567 189 aa14.15□□□□□ -0.14
HDAC4-209ENST00000487617 IGLV2-11P01706 119 aa14.15□□□□□ -0.14
HDAC4-209ENST00000487617 TYMSP04818 313 aa14.15□□□□□ -0.14
HDAC4-209ENST00000487617 SLAQ13239 276 aa14.15□□□□□ -0.14
HDAC4-209ENST00000487617 FHL2Q14192 279 aa14.15□□□□□ -0.14
HDAC4-209ENST00000487617 KCNRGQ8N5I3 272 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms