RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 LINC00479Q96M42 142 aa8.47□□□□□ -1.05
SND1-212ENST00000485871 RPP21Q9H633 154 aaKnown RBP8.47□□□□□ -1.05
SND1-212ENST00000485871 RPH3ALQ9UNE2 315 aa8.47□□□□□ -1.05
SND1-212ENST00000485871 ZNF256Q9Y2P7 627 aaPredicted RBP8.47□□□□□ -1.05
SND1-212ENST00000485871 IGKV3-7A0A075B6H7 116 aa8.46□□□□□ -1.06
SND1-212ENST00000485871 C19orf71A6NCJ1 209 aa8.46□□□□□ -1.06
SND1-212ENST00000485871 SAP30O75446 220 aa8.46□□□□□ -1.06
SND1-212ENST00000485871 PSG3Q16557 428 aa8.46□□□□□ -1.06
SND1-212ENST00000485871 SAPCD1Q5SSQ6 148 aa8.46□□□□□ -1.06
SND1-212ENST00000485871 GOLT1AQ6ZVE7 132 aa8.46□□□□□ -1.06
SND1-212ENST00000485871 GBGT1Q8N5D6 347 aa8.46□□□□□ -1.06
SND1-212ENST00000485871 OR2K2Q8NGT1 345 aa8.46□□□□□ -1.06
SND1-212ENST00000485871 MRPL18Q9H0U6 180 aaKnown RBP8.46□□□□□ -1.06
SND1-212ENST00000485871 NOTCH1P46531 2555 aa8.46□□□□□ -1.06
SND1-212ENST00000485871 SNURFLB1AK76 121 aa8.45□□□□□ -1.06
SND1-212ENST00000485871 DIRC3C9JPN6 131 aa8.45□□□□□ -1.06
SND1-212ENST00000485871 NPIPB6E9PJ23 425 aa8.45□□□□□ -1.06
SND1-212ENST00000485871 RPL11P62913 178 aaKnown RBP8.45□□□□□ -1.06
SND1-212ENST00000485871 SAMD13Q5VXD3 122 aa8.45□□□□□ -1.06
SND1-212ENST00000485871 Q6AWC8 147 aa8.45□□□□□ -1.06
SND1-212ENST00000485871 COX8CQ7Z4L0 72 aa8.45□□□□□ -1.06
SND1-212ENST00000485871 RNF182Q8N6D2 247 aa8.45□□□□□ -1.06
SND1-212ENST00000485871 TMEM18Q96B42 140 aa8.45□□□□□ -1.06
SND1-212ENST00000485871 C16orf92Q96LL3 132 aa8.45□□□□□ -1.06
SND1-212ENST00000485871 SPAG8Q99932 426 aaPredicted RBP8.45□□□□□ -1.06
SND1-212ENST00000485871 PSG8Q9UQ74 426 aa8.45□□□□□ -1.06
SND1-212ENST00000485871 RBAKDNA6NC62 111 aa8.44□□□□□ -1.06
SND1-212ENST00000485871 ZNF705FA8MVS1 300 aaPredicted RBP8.44□□□□□ -1.06
SND1-212ENST00000485871 PRAC2D3DTV9 90 aa8.44□□□□□ -1.06
SND1-212ENST00000485871 IGLV2-11P01706 119 aa8.44□□□□□ -1.06
SND1-212ENST00000485871 CT45A10P0DMU9 189 aa8.44□□□□□ -1.06
SND1-212ENST00000485871 Q0VG73 95 aa8.44□□□□□ -1.06
SND1-212ENST00000485871 LCN12Q6JVE5 192 aa8.44□□□□□ -1.06
SND1-212ENST00000485871 PRR27Q6MZM9 219 aa8.44□□□□□ -1.06
SND1-212ENST00000485871 NHLRC2Q8NBF2 726 aa8.44□□□□□ -1.06
SND1-212ENST00000485871 PACRGQ96M98 296 aaPredicted RBP8.44□□□□□ -1.06
SND1-212ENST00000485871 GPR61Q9BZJ8 451 aa8.44□□□□□ -1.06
SND1-212ENST00000485871 A0A1B0GW15 77 aa8.43□□□□□ -1.06
SND1-212ENST00000485871 PRB4P10163 310 aaPredicted RBP8.43□□□□□ -1.06
SND1-212ENST00000485871 CRISP2P16562 243 aa8.43□□□□□ -1.06
SND1-212ENST00000485871 CD33P20138 364 aa8.43□□□□□ -1.06
SND1-212ENST00000485871 TFPI2P48307 235 aa8.43□□□□□ -1.06
SND1-212ENST00000485871 INSL3P51460 131 aa8.43□□□□□ -1.06
SND1-212ENST00000485871 PAFAH1B2P68402 229 aa8.43□□□□□ -1.06
SND1-212ENST00000485871 OR10J3Q5JRS4 329 aa8.43□□□□□ -1.06
SND1-212ENST00000485871 C9orf66Q5T8R8 295 aa8.43□□□□□ -1.06
SND1-212ENST00000485871 TMEM136Q6ZRR5 245 aa8.43□□□□□ -1.06
SND1-212ENST00000485871 RBPMS2Q6ZRY4 209 aaKnown RBP8.43□□□□□ -1.06
SND1-212ENST00000485871 PRNTQ86SH4 94 aa8.43□□□□□ -1.06
SND1-212ENST00000485871 WFDC3Q8IUB2 231 aa8.43□□□□□ -1.06
SND1-212ENST00000485871 HIST1H2BLQ99880 126 aa8.43□□□□□ -1.06
SND1-212ENST00000485871 NDFIP1Q9BT67 221 aa8.43□□□□□ -1.06
SND1-212ENST00000485871 AGRNO00468 2067 aa8.42□□□□□ -1.06
SND1-212ENST00000485871 SORL1Q92673 2214 aa8.42□□□□□ -1.06
SND1-212ENST00000485871 IGKV2-40A0A087WW87 121 aaPredicted RBP8.42□□□□□ -1.06
SND1-212ENST00000485871 IFITM10A6NMD0 228 aa8.42□□□□□ -1.06
SND1-212ENST00000485871 HIGD1CA8MV81 97 aa8.42□□□□□ -1.06
SND1-212ENST00000485871 IGKV2D-40P01614 121 aaPredicted RBP8.42□□□□□ -1.06
SND1-212ENST00000485871 ZNF688P0C7X2 276 aa8.42□□□□□ -1.06
SND1-212ENST00000485871 ESDP10768 282 aa8.42□□□□□ -1.06
SND1-212ENST00000485871 FABP4P15090 132 aa8.42□□□□□ -1.06
SND1-212ENST00000485871 FOXA3P55318 350 aaPredicted RBP8.42□□□□□ -1.06
SND1-212ENST00000485871 DEFB1P60022 68 aa8.42□□□□□ -1.06
SND1-212ENST00000485871 BEAN1Q3B7T3 259 aa8.42□□□□□ -1.06
SND1-212ENST00000485871 FAM162BQ5T6X4 162 aa8.42□□□□□ -1.06
SND1-212ENST00000485871 NUP35Q8NFH5 326 aa8.42□□□□□ -1.06
SND1-212ENST00000485871 OR10D4PQ8NGN7 298 aa8.42□□□□□ -1.06
SND1-212ENST00000485871 NEU1Q99519 415 aa8.42□□□□□ -1.06
SND1-212ENST00000485871 MCRIP2Q9BUT9 160 aaKnown RBP8.42□□□□□ -1.06
SND1-212ENST00000485871 TRAV8-1A0A0A6YYK1 113 aa8.41□□□□□ -1.06
SND1-212ENST00000485871 OR4C46A6NHA9 309 aa8.41□□□□□ -1.06
SND1-212ENST00000485871 APCSP02743 223 aa8.41□□□□□ -1.06
SND1-212ENST00000485871 IGLL1P15814 213 aa8.41□□□□□ -1.06
SND1-212ENST00000485871 ID1P41134 155 aa8.41□□□□□ -1.06
SND1-212ENST00000485871 TCL1AP56279 114 aa8.41□□□□□ -1.06
SND1-212ENST00000485871 RPS20P60866 119 aaKnown RBP8.41□□□□□ -1.06
SND1-212ENST00000485871 RAB4BP61018 213 aa8.41□□□□□ -1.06
SND1-212ENST00000485871 HBBP68871 147 aa8.41□□□□□ -1.06
SND1-212ENST00000485871 ODF3L2Q3SX64 289 aa8.41□□□□□ -1.06
SND1-212ENST00000485871 ZNF738Q8NE65 137 aa8.41□□□□□ -1.06
SND1-212ENST00000485871 MAP6D1Q9H9H5 199 aa8.41□□□□□ -1.06
SND1-212ENST00000485871 NIT2Q9NQR4 276 aa8.41□□□□□ -1.06
SND1-212ENST00000485871 A0A1B0GXF2 115 aa8.4□□□□□ -1.06
SND1-212ENST00000485871 A8MTW9 85 aa8.4□□□□□ -1.06
SND1-212ENST00000485871 F6UB75 175 aa8.4□□□□□ -1.06
SND1-212ENST00000485871 AMBPP02760 352 aa8.4□□□□□ -1.06
SND1-212ENST00000485871 PSMG4Q5JS54 123 aa8.4□□□□□ -1.06
SND1-212ENST00000485871 GDF5OSQ5U4N7 250 aa8.4□□□□□ -1.06
SND1-212ENST00000485871 GFI1BQ5VTD9 330 aa8.4□□□□□ -1.06
SND1-212ENST00000485871 DMRTA1Q5VZB9 504 aa8.4□□□□□ -1.06
SND1-212ENST00000485871 MRPL54Q6P161 138 aaKnown RBP8.4□□□□□ -1.06
SND1-212ENST00000485871 C9orf47Q6ZRZ4 202 aa8.4□□□□□ -1.06
SND1-212ENST00000485871 BORCS7Q96B45 105 aa8.4□□□□□ -1.06
SND1-212ENST00000485871 SGK494Q96LW2 274 aa8.4□□□□□ -1.06
SND1-212ENST00000485871 VGLL1Q99990 258 aa8.4□□□□□ -1.06
SND1-212ENST00000485871 C19orf73Q9NVV2 129 aa8.4□□□□□ -1.06
SND1-212ENST00000485871 PPP1R14DQ9NXH3 145 aa8.4□□□□□ -1.06
SND1-212ENST00000485871 TRRAPQ9Y4A5 3859 aa8.4□□□□□ -1.07
SND1-212ENST00000485871 A0A0J9YX75 114 aa8.39□□□□□ -1.07
SND1-212ENST00000485871 DEFB131AP59861 70 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms