RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 RAB5CP51148 216 aa12.67□□□□□ -0.38
SREBF1-213ENST00000485080 BTN1A1Q13410 526 aa12.67□□□□□ -0.38
SREBF1-213ENST00000485080 PRR9Q5T870 116 aa12.67□□□□□ -0.38
SREBF1-213ENST00000485080 SLC51BQ86UW2 128 aa12.67□□□□□ -0.38
SREBF1-213ENST00000485080 CCDC28AQ8IWP9 274 aa12.67□□□□□ -0.38
SREBF1-213ENST00000485080 C2CD4CQ8TF44 421 aa12.67□□□□□ -0.38
SREBF1-213ENST00000485080 TMPRSS5Q9H3S3 457 aa12.67□□□□□ -0.38
SREBF1-213ENST00000485080 A0A1B0GVG6 124 aa12.66□□□□□ -0.38
SREBF1-213ENST00000485080 FAM74A7A6NL05 159 aa12.66□□□□□ -0.38
SREBF1-213ENST00000485080 J3KRW8 73 aa12.66□□□□□ -0.38
SREBF1-213ENST00000485080 FGF8P55075 233 aaPredicted RBP12.66□□□□□ -0.38
SREBF1-213ENST00000485080 ANXA2RQ3ZCQ2 193 aa12.66□□□□□ -0.38
SREBF1-213ENST00000485080 Q6AWC8 147 aa12.66□□□□□ -0.38
SREBF1-213ENST00000485080 IQCF2Q8IXL9 164 aa12.66□□□□□ -0.38
SREBF1-213ENST00000485080 TIMM8BQ9Y5J9 83 aaPredicted RBP12.66□□□□□ -0.38
SREBF1-213ENST00000485080 K7EQM0 130 aa12.65□□□□□ -0.38
SREBF1-213ENST00000485080 GNG5P63218 68 aa12.65□□□□□ -0.38
SREBF1-213ENST00000485080 C9orf62Q8N4C0 152 aa12.65□□□□□ -0.38
SREBF1-213ENST00000485080 CYB561D1Q8N8Q1 229 aa12.65□□□□□ -0.38
SREBF1-213ENST00000485080 FAM213BQ8TBF2 198 aa12.65□□□□□ -0.38
SREBF1-213ENST00000485080 TCEAL7Q9BRU2 100 aa12.65□□□□□ -0.38
SREBF1-213ENST00000485080 ATG101Q9BSB4 218 aa12.65□□□□□ -0.38
SREBF1-213ENST00000485080 HTN1P15515 57 aa12.64□□□□□ -0.39
SREBF1-213ENST00000485080 ZFP69Q49AA0 526 aa12.64□□□□□ -0.39
SREBF1-213ENST00000485080 EIF4E3Q8N5X7 224 aaKnown RBP12.64□□□□□ -0.39
SREBF1-213ENST00000485080 TMEM75Q8N9X5 138 aa12.64□□□□□ -0.39
SREBF1-213ENST00000485080 ZNF680Q8NEM1 530 aa12.64□□□□□ -0.39
SREBF1-213ENST00000485080 SFT2D1Q8WV19 159 aa12.64□□□□□ -0.39
SREBF1-213ENST00000485080 RPH3ALQ9UNE2 315 aa12.64□□□□□ -0.39
SREBF1-213ENST00000485080 DEFB131BA0A096LNP1 70 aa12.63□□□□□ -0.39
SREBF1-213ENST00000485080 TRAV8-1A0A0A6YYK1 113 aa12.63□□□□□ -0.39
SREBF1-213ENST00000485080 TRAV1-1A0A0B4J248 108 aa12.63□□□□□ -0.39
SREBF1-213ENST00000485080 IGLV2-11P01706 119 aa12.63□□□□□ -0.39
SREBF1-213ENST00000485080 DAZ2Q13117 558 aaKnown RBP12.63□□□□□ -0.39
SREBF1-213ENST00000485080 ZNF767PQ75MW2 155 aa12.63□□□□□ -0.39
SREBF1-213ENST00000485080 LINC00612Q8N6U2 182 aa12.63□□□□□ -0.39
SREBF1-213ENST00000485080 HIST1H2BAQ96A08 127 aa12.63□□□□□ -0.39
SREBF1-213ENST00000485080 TVP23CQ96ET8 276 aa12.63□□□□□ -0.39
SREBF1-213ENST00000485080 FAM210BQ96KR6 192 aa12.63□□□□□ -0.39
SREBF1-213ENST00000485080 KMT2AQ03164 3969 aa12.62□□□□□ -0.39
SREBF1-213ENST00000485080 IGHV1OR15-1A0A075B7D0 117 aa12.62□□□□□ -0.39
SREBF1-213ENST00000485080 H2AFB1P0C5Y9 115 aa12.62□□□□□ -0.39
SREBF1-213ENST00000485080 SULT1A2P50226 295 aa12.62□□□□□ -0.39
SREBF1-213ENST00000485080 DAD1P61803 113 aa12.62□□□□□ -0.39
SREBF1-213ENST00000485080 C11orf72Q8NBR9 251 aa12.62□□□□□ -0.39
SREBF1-213ENST00000485080 TREM1Q9NP99 234 aa12.62□□□□□ -0.39
SREBF1-213ENST00000485080 PSG8Q9UQ74 426 aa12.62□□□□□ -0.39
SREBF1-213ENST00000485080 DNAH6Q9C0G6 4158 aa12.61□□□□□ -0.39
SREBF1-213ENST00000485080 PPT1P50897 306 aa12.61□□□□□ -0.39
SREBF1-213ENST00000485080 UBE2G2P60604 165 aa12.61□□□□□ -0.39
SREBF1-213ENST00000485080 FLI1Q01543 452 aaPredicted RBP12.61□□□□□ -0.39
SREBF1-213ENST00000485080 TDRG1Q3Y452 100 aa12.61□□□□□ -0.39
SREBF1-213ENST00000485080 IBA57Q5T440 356 aaKnown RBP12.61□□□□□ -0.39
SREBF1-213ENST00000485080 NDFIP1Q9BT67 221 aa12.61□□□□□ -0.39
SREBF1-213ENST00000485080 NOP10Q9NPE3 64 aaKnown RBP12.61□□□□□ -0.39
SREBF1-213ENST00000485080 CBY3A6NI87 242 aa12.6□□□□□ -0.39
SREBF1-213ENST00000485080 SNURFLB1AK76 121 aa12.6□□□□□ -0.39
SREBF1-213ENST00000485080 PEX7O00628 323 aa12.6□□□□□ -0.39
SREBF1-213ENST00000485080 RGS13O14921 159 aa12.6□□□□□ -0.39
SREBF1-213ENST00000485080 IFNA7P01567 189 aa12.6□□□□□ -0.39
SREBF1-213ENST00000485080 SAPCD1Q5SSQ6 148 aa12.6□□□□□ -0.39
SREBF1-213ENST00000485080 Q6ZQT7 251 aa12.6□□□□□ -0.39
SREBF1-213ENST00000485080 TP53TG3Q9ULZ0 132 aa12.6□□□□□ -0.39
SREBF1-213ENST00000485080 KLF12Q9Y4X4 402 aa12.6□□□□□ -0.39
SREBF1-213ENST00000485080 HYDINQ4G0P3 5121 aa12.6□□□□□ -0.39
SREBF1-213ENST00000485080 TRAV21A0A0B4J279 112 aa12.59□□□□□ -0.39
SREBF1-213ENST00000485080 IGLL5B9A064 214 aa12.59□□□□□ -0.39
SREBF1-213ENST00000485080 APLNQ9ULZ1 77 aa12.59□□□□□ -0.39
SREBF1-213ENST00000485080 TRBV6-1A0A0K0K1D8 114 aa12.58□□□□□ -0.4
SREBF1-213ENST00000485080 F6UZH7 168 aa12.58□□□□□ -0.4
SREBF1-213ENST00000485080 TCL1AP56279 114 aa12.58□□□□□ -0.4
SREBF1-213ENST00000485080 COX8CQ7Z4L0 72 aa12.58□□□□□ -0.4
SREBF1-213ENST00000485080 LINC00476Q8WZB0 136 aa12.58□□□□□ -0.4
SREBF1-213ENST00000485080 C18orf15Q96N68 181 aa12.58□□□□□ -0.4
SREBF1-213ENST00000485080 IGHV4-4A0A075B6R2 117 aa12.57□□□□□ -0.4
SREBF1-213ENST00000485080 PAGE4O60829 102 aa12.57□□□□□ -0.4
SREBF1-213ENST00000485080 DEFB130BP0DP73 79 aa12.57□□□□□ -0.4
SREBF1-213ENST00000485080 DEFB130AP0DP74 79 aa12.57□□□□□ -0.4
SREBF1-213ENST00000485080 CST9LP1Q5W188 147 aa12.57□□□□□ -0.4
SREBF1-213ENST00000485080 FAM159AQ6UWV7 190 aa12.57□□□□□ -0.4
SREBF1-213ENST00000485080 SGK494Q96LW2 274 aa12.57□□□□□ -0.4
SREBF1-213ENST00000485080 GSN-AS1Q9NRJ2 163 aa12.57□□□□□ -0.4
SREBF1-213ENST00000485080 TEX46H3BTG2 121 aa12.56□□□□□ -0.4
SREBF1-213ENST00000485080 SPINK4O60575 86 aa12.56□□□□□ -0.4
SREBF1-213ENST00000485080 LGALS9BQ3B8N2 356 aa12.56□□□□□ -0.4
SREBF1-213ENST00000485080 SMUG1Q53HV7 270 aa12.56□□□□□ -0.4
SREBF1-213ENST00000485080 LGALS9CQ6DKI2 356 aa12.56□□□□□ -0.4
SREBF1-213ENST00000485080 PRNTQ86SH4 94 aa12.56□□□□□ -0.4
SREBF1-213ENST00000485080 LINC00479Q96M42 142 aa12.56□□□□□ -0.4
SREBF1-213ENST00000485080 MUC4Q99102 2169 aa12.55□□□□□ -0.4
SREBF1-213ENST00000485080 ATP5G1P05496 136 aa12.55□□□□□ -0.4
SREBF1-213ENST00000485080 ATP5G3P48201 142 aa12.55□□□□□ -0.4
SREBF1-213ENST00000485080 FMC1Q96HJ9 113 aa12.55□□□□□ -0.4
SREBF1-213ENST00000485080 KCNS1Q96KK3 526 aa12.55□□□□□ -0.4
SREBF1-213ENST00000485080 TXNDC17Q9BRA2 123 aa12.55□□□□□ -0.4
SREBF1-213ENST00000485080 NDUFAF3Q9BU61 184 aa12.55□□□□□ -0.4
SREBF1-213ENST00000485080 MANBALQ9NQG1 85 aa12.55□□□□□ -0.4
SREBF1-213ENST00000485080 ZFP30Q9Y2G7 519 aa12.55□□□□□ -0.4
SREBF1-213ENST00000485080 TRGV11A0A075B6L2 103 aa12.54□□□□□ -0.4
SREBF1-213ENST00000485080 TRAV34A0A0B4J273 112 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms