RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 C7orf71A4D174 169 aa4.34□□□□□ -1.71
PTCD3-215ENST00000484203 RBAKDNA6NC62 111 aa4.34□□□□□ -1.71
PTCD3-215ENST00000484203 SLC17A3O00476 420 aa4.34□□□□□ -1.71
PTCD3-215ENST00000484203 MPC2O95563 127 aa4.34□□□□□ -1.71
PTCD3-215ENST00000484203 CT45A10P0DMU9 189 aa4.34□□□□□ -1.71
PTCD3-215ENST00000484203 CRISP2P16562 243 aa4.34□□□□□ -1.71
PTCD3-215ENST00000484203 M6PRP20645 277 aa4.34□□□□□ -1.71
PTCD3-215ENST00000484203 RPL12P30050 165 aaKnown RBP4.34□□□□□ -1.71
PTCD3-215ENST00000484203 SLAQ13239 276 aa4.34□□□□□ -1.71
PTCD3-215ENST00000484203 ZNF266Q14584 549 aa4.34□□□□□ -1.71
PTCD3-215ENST00000484203 CLINT1Q14677 625 aa4.34□□□□□ -1.71
PTCD3-215ENST00000484203 ANXA2RQ3ZCQ2 193 aa4.34□□□□□ -1.71
PTCD3-215ENST00000484203 LRRC37A5PQ49AS3 106 aa4.34□□□□□ -1.71
PTCD3-215ENST00000484203 KHDC3LQ587J8 217 aa4.34□□□□□ -1.71
PTCD3-215ENST00000484203 GFI1BQ5VTD9 330 aa4.34□□□□□ -1.71
PTCD3-215ENST00000484203 MORN5Q5VZ52 161 aa4.34□□□□□ -1.71
PTCD3-215ENST00000484203 C9orf47Q6ZRZ4 202 aa4.34□□□□□ -1.71
PTCD3-215ENST00000484203 THAP6Q8TBB0 222 aa4.34□□□□□ -1.71
PTCD3-215ENST00000484203 C18orf15Q96N68 181 aa4.34□□□□□ -1.71
PTCD3-215ENST00000484203 PAXXQ9BUH6 204 aa4.34□□□□□ -1.71
PTCD3-215ENST00000484203 NOP10Q9NPE3 64 aaKnown RBP4.34□□□□□ -1.71
PTCD3-215ENST00000484203 LENEPQ9Y5L5 61 aa4.34□□□□□ -1.71
PTCD3-215ENST00000484203 AGRNO00468 2067 aa4.33□□□□□ -1.72
PTCD3-215ENST00000484203 HECTD4Q9Y4D8 3996 aa4.33□□□□□ -1.72
PTCD3-215ENST00000484203 TRGV2A0A075B6R0 118 aa4.33□□□□□ -1.72
PTCD3-215ENST00000484203 A0A1W2PPV4 95 aa4.33□□□□□ -1.72
PTCD3-215ENST00000484203 PLAC8L1A1L4L8 177 aa4.33□□□□□ -1.72
PTCD3-215ENST00000484203 KLLNB2CW77 178 aa4.33□□□□□ -1.72
PTCD3-215ENST00000484203 PRAC2D3DTV9 90 aa4.33□□□□□ -1.72
PTCD3-215ENST00000484203 H3BTX0 84 aa4.33□□□□□ -1.72
PTCD3-215ENST00000484203 OR7C2O60412 319 aa4.33□□□□□ -1.72
PTCD3-215ENST00000484203 NDUFB4O95168 129 aa4.33□□□□□ -1.72
PTCD3-215ENST00000484203 SIX6O95475 246 aa4.33□□□□□ -1.72
PTCD3-215ENST00000484203 PTTG1O95997 202 aa4.33□□□□□ -1.72
PTCD3-215ENST00000484203 MBP02144 154 aa4.33□□□□□ -1.72
PTCD3-215ENST00000484203 GPX1P07203 203 aa4.33□□□□□ -1.72
PTCD3-215ENST00000484203 AZU1P20160 251 aa4.33□□□□□ -1.72
PTCD3-215ENST00000484203 ZNF138P52744 262 aa4.33□□□□□ -1.72
PTCD3-215ENST00000484203 H2BFSP57053 126 aa4.33□□□□□ -1.72
PTCD3-215ENST00000484203 ACOT6Q3I5F7 207 aaPredicted RBP4.33□□□□□ -1.72
PTCD3-215ENST00000484203 TTC32Q5I0X7 151 aa4.33□□□□□ -1.72
PTCD3-215ENST00000484203 IBA57Q5T440 356 aaKnown RBP4.33□□□□□ -1.72
PTCD3-215ENST00000484203 PQLC2Q6ZP29 291 aa4.33□□□□□ -1.72
PTCD3-215ENST00000484203 EIF4E3Q8N5X7 224 aaKnown RBP4.33□□□□□ -1.72
PTCD3-215ENST00000484203 LINC00612Q8N6U2 182 aa4.33□□□□□ -1.72
PTCD3-215ENST00000484203 CMTM2Q8TAZ6 248 aa4.33□□□□□ -1.72
PTCD3-215ENST00000484203 BLNKQ8WV28 456 aa4.33□□□□□ -1.72
PTCD3-215ENST00000484203 TMED6Q8WW62 240 aa4.33□□□□□ -1.72
PTCD3-215ENST00000484203 GNPNAT1Q96EK6 184 aaPredicted RBP4.33□□□□□ -1.72
PTCD3-215ENST00000484203 SLC25A2Q9BXI2 301 aa4.33□□□□□ -1.72
PTCD3-215ENST00000484203 OR5AC2Q9NZP5 309 aa4.33□□□□□ -1.72
PTCD3-215ENST00000484203 HSPB11Q9Y547 144 aa4.33□□□□□ -1.72
PTCD3-215ENST00000484203 DNAH6Q9C0G6 4158 aa4.32□□□□□ -1.72
PTCD3-215ENST00000484203 TRAV12-3A0A0B4J271 114 aa4.32□□□□□ -1.72
PTCD3-215ENST00000484203 SERTM2A0A1B0GWG4 89 aa4.32□□□□□ -1.72
PTCD3-215ENST00000484203 M0R3E3 92 aa4.32□□□□□ -1.72
PTCD3-215ENST00000484203 SNRPCP09234 159 aaKnown RBP4.32□□□□□ -1.72
PTCD3-215ENST00000484203 PYYP10082 97 aa4.32□□□□□ -1.72
PTCD3-215ENST00000484203 RNASE4P34096 147 aaKnown RBP4.32□□□□□ -1.72
PTCD3-215ENST00000484203 UBE2L3P68036 154 aaKnown RBP4.32□□□□□ -1.72
PTCD3-215ENST00000484203 IFITM3Q01628 133 aa4.32□□□□□ -1.72
PTCD3-215ENST00000484203 OR5I1Q13606 314 aa4.32□□□□□ -1.72
PTCD3-215ENST00000484203 FFAR4Q5NUL3 377 aa4.32□□□□□ -1.72
PTCD3-215ENST00000484203 C1orf134Q5TEV5 83 aa4.32□□□□□ -1.72
PTCD3-215ENST00000484203 Q6ZR54 194 aa4.32□□□□□ -1.72
PTCD3-215ENST00000484203 FAM167A-AS1Q96KT0 104 aa4.32□□□□□ -1.72
PTCD3-215ENST00000484203 FAM19A4Q96LR4 140 aa4.32□□□□□ -1.72
PTCD3-215ENST00000484203 ARPC5LQ9BPX5 153 aa4.32□□□□□ -1.72
PTCD3-215ENST00000484203 AGPAT4-IT1Q9H0P7 198 aa4.32□□□□□ -1.72
PTCD3-215ENST00000484203 DNAH10Q8IVF4 4471 aa4.32□□□□□ -1.72
PTCD3-215ENST00000484203 IGHV1OR15-1A0A075B7D0 117 aa4.31□□□□□ -1.72
PTCD3-215ENST00000484203 A0A1W2PPQ1 181 aa4.31□□□□□ -1.72
PTCD3-215ENST00000484203 FBLL1A6NHQ2 334 aaKnown RBP4.31□□□□□ -1.72
PTCD3-215ENST00000484203 K7EP13 123 aa4.31□□□□□ -1.72
PTCD3-215ENST00000484203 K7EQM0 130 aa4.31□□□□□ -1.72
PTCD3-215ENST00000484203 ZNF324O75467 553 aaPredicted RBP4.31□□□□□ -1.72
PTCD3-215ENST00000484203 GAGE7O76087 117 aa4.31□□□□□ -1.72
PTCD3-215ENST00000484203 OR10J4P0C629 311 aa4.31□□□□□ -1.72
PTCD3-215ENST00000484203 GAGE12FP0CL80 117 aa4.31□□□□□ -1.72
PTCD3-215ENST00000484203 GAGE12GP0CL81 117 aa4.31□□□□□ -1.72
PTCD3-215ENST00000484203 GAGE12IP0CL82 117 aa4.31□□□□□ -1.72
PTCD3-215ENST00000484203 TCL1AP56279 114 aa4.31□□□□□ -1.72
PTCD3-215ENST00000484203 RANP62826 216 aaKnown RBP4.31□□□□□ -1.72
PTCD3-215ENST00000484203 SERF2P84101 59 aa4.31□□□□□ -1.72
PTCD3-215ENST00000484203 GCSAMLQ5JQS6 135 aa4.31□□□□□ -1.72
PTCD3-215ENST00000484203 FAM122CQ6P4D5 195 aa4.31□□□□□ -1.72
PTCD3-215ENST00000484203 MIR17HGQ75NE6 70 aa4.31□□□□□ -1.72
PTCD3-215ENST00000484203 EXOC3-AS1Q8N2X6 119 aa4.31□□□□□ -1.72
PTCD3-215ENST00000484203 INO80EQ8NBZ0 244 aaPredicted RBP4.31□□□□□ -1.72
PTCD3-215ENST00000484203 FXYD5Q96DB9 178 aa4.31□□□□□ -1.72
PTCD3-215ENST00000484203 SPXQ9BT56 116 aa4.31□□□□□ -1.72
PTCD3-215ENST00000484203 MED28Q9H204 178 aa4.31□□□□□ -1.72
PTCD3-215ENST00000484203 Q9H3A6 140 aa4.31□□□□□ -1.72
PTCD3-215ENST00000484203 OTORQ9NRC9 128 aa4.31□□□□□ -1.72
PTCD3-215ENST00000484203 ZNF492Q9P255 531 aa4.31□□□□□ -1.72
PTCD3-215ENST00000484203 MBD2Q9UBB5 411 aa4.31□□□□□ -1.72
PTCD3-215ENST00000484203 TRAV26-1A0A087WT03 109 aa4.3□□□□□ -1.72
PTCD3-215ENST00000484203 TRGV1A0A0A0MS02 117 aa4.3□□□□□ -1.72
PTCD3-215ENST00000484203 NBDYA0A0U1RRE5 68 aa4.3□□□□□ -1.72
PTCD3-215ENST00000484203 J3KRW8 73 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms