RNA–Protein interactions for RNA: ENST00000483212.1

USP4-210, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 2

Gene USP4, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-210ENST00000483212 ZFAND2AQ8N6M9 145 aa6.09□□□□□ -1.43
USP4-210ENST00000483212 ZC2HC1AQ96GY0 325 aa6.09□□□□□ -1.43
USP4-210ENST00000483212 C8orf49Q96NF6 230 aa6.09□□□□□ -1.43
USP4-210ENST00000483212 CLUHP3Q96NS8 147 aa6.09□□□□□ -1.43
USP4-210ENST00000483212 ODF3Q96PU9 254 aa6.09□□□□□ -1.43
USP4-210ENST00000483212 WFDC10AQ9H1F0 79 aa6.09□□□□□ -1.43
USP4-210ENST00000483212 LENEPQ9Y5L5 61 aa6.09□□□□□ -1.43
USP4-210ENST00000483212 C19orf71A6NCJ1 209 aa6.08□□□□□ -1.44
USP4-210ENST00000483212 OR11H12B2RN74 326 aa6.08□□□□□ -1.44
USP4-210ENST00000483212 DUSP14O95147 198 aaKnown RBP6.08□□□□□ -1.44
USP4-210ENST00000483212 OR5I1Q13606 314 aa6.08□□□□□ -1.44
USP4-210ENST00000483212 ADIRFQ15847 76 aa6.08□□□□□ -1.44
USP4-210ENST00000483212 OXLD1Q5BKU9 147 aa6.08□□□□□ -1.44
USP4-210ENST00000483212 ACTL10Q5JWF8 245 aa6.08□□□□□ -1.44
USP4-210ENST00000483212 SAPCD1Q5SSQ6 148 aa6.08□□□□□ -1.44
USP4-210ENST00000483212 EBLN2Q6P2I7 272 aa6.08□□□□□ -1.44
USP4-210ENST00000483212 TRPT1Q86TN4 253 aaKnown RBP6.08□□□□□ -1.44
USP4-210ENST00000483212 Q8N1Y9 231 aa6.08□□□□□ -1.44
USP4-210ENST00000483212 KRTAP4-9Q9BYQ8 210 aa6.08□□□□□ -1.44
USP4-210ENST00000483212 C7orf77A4D0Y5 90 aa6.07□□□□□ -1.44
USP4-210ENST00000483212 KLLNB2CW77 178 aa6.07□□□□□ -1.44
USP4-210ENST00000483212 SNAPINO95295 136 aa6.07□□□□□ -1.44
USP4-210ENST00000483212 KRTAP10-11P60412 298 aa6.07□□□□□ -1.44
USP4-210ENST00000483212 KIR3DS1Q14943 382 aa6.07□□□□□ -1.44
USP4-210ENST00000483212 RHEBQ15382 184 aa6.07□□□□□ -1.44
USP4-210ENST00000483212 SAMD5Q5TGI4 173 aa6.07□□□□□ -1.44
USP4-210ENST00000483212 FAM231DQ6ZW35 169 aa6.07□□□□□ -1.44
USP4-210ENST00000483212 ZNF575Q86XF7 245 aa6.07□□□□□ -1.44
USP4-210ENST00000483212 KRTAP19-1Q8IUB9 90 aa6.07□□□□□ -1.44
USP4-210ENST00000483212 NOTCH3Q9UM47 2321 aa6.07□□□□□ -1.44
USP4-210ENST00000483212 A0A087WWC5 75 aa6.06□□□□□ -1.44
USP4-210ENST00000483212 B4DEV8 164 aa6.06□□□□□ -1.44
USP4-210ENST00000483212 G3V4G9 280 aa6.06□□□□□ -1.44
USP4-210ENST00000483212 M0R036 132 aa6.06□□□□□ -1.44
USP4-210ENST00000483212 CRXO43186 299 aaPredicted RBP6.06□□□□□ -1.44
USP4-210ENST00000483212 IGKV3-20P01619 116 aa6.06□□□□□ -1.44
USP4-210ENST00000483212 MGST1P10620 155 aaKnown RBP6.06□□□□□ -1.44
USP4-210ENST00000483212 RNF212Q495C1 297 aa6.06□□□□□ -1.44
USP4-210ENST00000483212 SMUG1Q53HV7 270 aa6.06□□□□□ -1.44
USP4-210ENST00000483212 Q6ZQT7 251 aa6.06□□□□□ -1.44
USP4-210ENST00000483212 NUDT10Q8NFP7 164 aa6.06□□□□□ -1.44
USP4-210ENST00000483212 OR4B1Q8NGF8 309 aa6.06□□□□□ -1.44
USP4-210ENST00000483212 NUDT11Q96G61 164 aa6.06□□□□□ -1.44
USP4-210ENST00000483212 SFRP2Q96HF1 295 aa6.06□□□□□ -1.44
USP4-210ENST00000483212 NDFIP1Q9BT67 221 aa6.06□□□□□ -1.44
USP4-210ENST00000483212 RNASE7Q9H1E1 156 aaKnown RBP6.06□□□□□ -1.44
USP4-210ENST00000483212 OSTCQ9NRP0 149 aa6.06□□□□□ -1.44
USP4-210ENST00000483212 V9GYV3 84 aa6.06□□□□□ -1.44
USP4-210ENST00000483212 SORL1Q92673 2214 aa6.05□□□□□ -1.44
USP4-210ENST00000483212 M0R2Z0 102 aa6.05□□□□□ -1.44
USP4-210ENST00000483212 SH2D1AO60880 128 aa6.05□□□□□ -1.44
USP4-210ENST00000483212 GIG44P09565 113 aaPredicted RBP6.05□□□□□ -1.44
USP4-210ENST00000483212 RBMY1A1P0DJD3 496 aaKnown RBP6.05□□□□□ -1.44
USP4-210ENST00000483212 RBMY1CP0DJD4 496 aa6.05□□□□□ -1.44
USP4-210ENST00000483212 LEPP41159 167 aa6.05□□□□□ -1.44
USP4-210ENST00000483212 BTN1A1Q13410 526 aa6.05□□□□□ -1.44
USP4-210ENST00000483212 RBMY1FQ15415 496 aaKnown RBP6.05□□□□□ -1.44
USP4-210ENST00000483212 IBA57Q5T440 356 aaKnown RBP6.05□□□□□ -1.44
USP4-210ENST00000483212 Q6AWC8 147 aa6.05□□□□□ -1.44
USP4-210ENST00000483212 PRR27Q6MZM9 219 aa6.05□□□□□ -1.44
USP4-210ENST00000483212 GTSCR1Q86UQ5 136 aa6.05□□□□□ -1.44
USP4-210ENST00000483212 Q8N3U1 123 aa6.05□□□□□ -1.44
USP4-210ENST00000483212 DEFB125Q8N687 156 aa6.05□□□□□ -1.44
USP4-210ENST00000483212 OR10G8Q8NGN5 311 aa6.05□□□□□ -1.44
USP4-210ENST00000483212 BIN3Q9NQY0 253 aa6.05□□□□□ -1.44
USP4-210ENST00000483212 C11orf21Q9P2W6 132 aa6.05□□□□□ -1.44
USP4-210ENST00000483212 C7orf71A4D174 169 aa6.04□□□□□ -1.44
USP4-210ENST00000483212 ZNF324O75467 553 aaPredicted RBP6.04□□□□□ -1.44
USP4-210ENST00000483212 SCO1O75880 301 aa6.04□□□□□ -1.44
USP4-210ENST00000483212 MT-ND4LP03901 98 aa6.04□□□□□ -1.44
USP4-210ENST00000483212 PFN1P07737 140 aaKnown RBP6.04□□□□□ -1.44
USP4-210ENST00000483212 CDKN1BP46527 198 aa6.04□□□□□ -1.44
USP4-210ENST00000483212 ERVFC1-1P60608 527 aa6.04□□□□□ -1.44
USP4-210ENST00000483212 SPINK13Q1W4C9 94 aa6.04□□□□□ -1.44
USP4-210ENST00000483212 FAM162BQ5T6X4 162 aa6.04□□□□□ -1.44
USP4-210ENST00000483212 KPRPQ5T749 579 aaPredicted RBP6.04□□□□□ -1.44
USP4-210ENST00000483212 GFI1BQ5VTD9 330 aa6.04□□□□□ -1.44
USP4-210ENST00000483212 STHQ8IWL8 128 aa6.04□□□□□ -1.44
USP4-210ENST00000483212 ANAPC16Q96DE5 110 aa6.04□□□□□ -1.44
USP4-210ENST00000483212 YPEL4Q96NS1 127 aa6.04□□□□□ -1.44
USP4-210ENST00000483212 CTDSP1Q9GZU7 261 aa6.04□□□□□ -1.44
USP4-210ENST00000483212 RPS10P5Q9NQ39 176 aa6.04□□□□□ -1.44
USP4-210ENST00000483212 TMEM242Q9NWH2 141 aa6.04□□□□□ -1.44
USP4-210ENST00000483212 AGRNO00468 2067 aa6.03□□□□□ -1.44
USP4-210ENST00000483212 TRAV12-2A0A075B6T6 113 aa6.03□□□□□ -1.44
USP4-210ENST00000483212 TRAV21A0A0B4J279 112 aa6.03□□□□□ -1.44
USP4-210ENST00000483212 IGKV3D-20A0A0C4DH25 116 aa6.03□□□□□ -1.44
USP4-210ENST00000483212 FABP5P3A8MUU1 101 aa6.03□□□□□ -1.44
USP4-210ENST00000483212 H7BYZ3 331 aa6.03□□□□□ -1.44
USP4-210ENST00000483212 J3KRW8 73 aa6.03□□□□□ -1.44
USP4-210ENST00000483212 PPP1R2P9O14990 202 aa6.03□□□□□ -1.44
USP4-210ENST00000483212 TSPOP30536 169 aa6.03□□□□□ -1.44
USP4-210ENST00000483212 FXYD7P58549 80 aa6.03□□□□□ -1.44
USP4-210ENST00000483212 RPL19P84098 196 aaKnown RBP6.03□□□□□ -1.44
USP4-210ENST00000483212 CT83Q5H943 113 aa6.03□□□□□ -1.44
USP4-210ENST00000483212 CBLN2Q8IUK8 224 aa6.03□□□□□ -1.44
USP4-210ENST00000483212 RPP21Q9H633 154 aaKnown RBP6.03□□□□□ -1.44
USP4-210ENST00000483212 SRD5A3Q9H8P0 318 aa6.03□□□□□ -1.44
USP4-210ENST00000483212 GATCO43716 136 aaKnown RBP6.02□□□□□ -1.45
USP4-210ENST00000483212 CA1P00915 261 aaPredicted RBP6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms