RNA–Protein interactions for RNA: ENST00000482728.1

SMIM4-204, Transcript of small integral membrane protein 4, humanhuman

TSL 2

Gene SMIM4, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-204ENST00000482728 A0A1W2PRE2 83 aa13.04□□□□□ -0.32
SMIM4-204ENST00000482728 MAP1LC3B2A6NCE7 125 aa13.04□□□□□ -0.32
SMIM4-204ENST00000482728 UMAD1C9J7I0 102 aa13.04□□□□□ -0.32
SMIM4-204ENST00000482728 FGF8P55075 233 aaPredicted RBP13.04□□□□□ -0.32
SMIM4-204ENST00000482728 MAP1LC3BQ9GZQ8 125 aa13.04□□□□□ -0.32
SMIM4-204ENST00000482728 TMPRSS5Q9H3S3 457 aa13.04□□□□□ -0.32
SMIM4-204ENST00000482728 EPDR1Q9UM22 224 aa13.04□□□□□ -0.32
SMIM4-204ENST00000482728 hCG_2014768A0A024R1R8 64 aa13.03□□□□□ -0.32
SMIM4-204ENST00000482728 IGHV1OR15-1A0A075B7D0 117 aa13.03□□□□□ -0.32
SMIM4-204ENST00000482728 TRAV8-1A0A0A6YYK1 113 aa13.03□□□□□ -0.32
SMIM4-204ENST00000482728 IFNA7P01567 189 aa13.03□□□□□ -0.32
SMIM4-204ENST00000482728 TCRAP04437 139 aa13.03□□□□□ -0.32
SMIM4-204ENST00000482728 ANXA2RQ3ZCQ2 193 aa13.03□□□□□ -0.32
SMIM4-204ENST00000482728 NDFIP1Q9BT67 221 aa13.03□□□□□ -0.32
SMIM4-204ENST00000482728 TREM1Q9NP99 234 aa13.03□□□□□ -0.32
SMIM4-204ENST00000482728 PLECQ15149 4684 aaKnown RBP13.03□□□□□ -0.32
SMIM4-204ENST00000482728 GGTLC3B5MD39 225 aa13.02□□□□□ -0.33
SMIM4-204ENST00000482728 ATP5G1P05496 136 aa13.02□□□□□ -0.33
SMIM4-204ENST00000482728 TPT1P13693 172 aaKnown RBP13.02□□□□□ -0.33
SMIM4-204ENST00000482728 ATP5G3P48201 142 aa13.02□□□□□ -0.33
SMIM4-204ENST00000482728 UBE2G2P60604 165 aa13.02□□□□□ -0.33
SMIM4-204ENST00000482728 SGK494Q96LW2 274 aa13.02□□□□□ -0.33
SMIM4-204ENST00000482728 NKX6-2Q9C056 277 aaPredicted RBP13.02□□□□□ -0.33
SMIM4-204ENST00000482728 GSN-AS1Q9NRJ2 163 aa13.02□□□□□ -0.33
SMIM4-204ENST00000482728 F5H768 121 aa13.01□□□□□ -0.33
SMIM4-204ENST00000482728 FHITP49789 147 aa13.01□□□□□ -0.33
SMIM4-204ENST00000482728 DAZ2Q13117 558 aaKnown RBP13.01□□□□□ -0.33
SMIM4-204ENST00000482728 Q6ZQT7 251 aa13.01□□□□□ -0.33
SMIM4-204ENST00000482728 AKAP14Q86UN6 197 aa13.01□□□□□ -0.33
SMIM4-204ENST00000482728 FAM213BQ8TBF2 198 aa13.01□□□□□ -0.33
SMIM4-204ENST00000482728 SACSQ9NZJ4 4579 aa13.01□□□□□ -0.33
SMIM4-204ENST00000482728 RYR3Q15413 4870 aa13.01□□□□□ -0.33
SMIM4-204ENST00000482728 GAGE12BA1L429 117 aa13□□□□□ -0.33
SMIM4-204ENST00000482728 GAGE7O76087 117 aa13□□□□□ -0.33
SMIM4-204ENST00000482728 GAGE12FP0CL80 117 aa13□□□□□ -0.33
SMIM4-204ENST00000482728 GAGE12GP0CL81 117 aa13□□□□□ -0.33
SMIM4-204ENST00000482728 GAGE12IP0CL82 117 aa13□□□□□ -0.33
SMIM4-204ENST00000482728 LGALSLQ3ZCW2 172 aaPredicted RBP13□□□□□ -0.33
SMIM4-204ENST00000482728 MUC21Q5SSG8 566 aa13□□□□□ -0.33
SMIM4-204ENST00000482728 Q6AWC8 147 aa13□□□□□ -0.33
SMIM4-204ENST00000482728 FAM159AQ6UWV7 190 aa13□□□□□ -0.33
SMIM4-204ENST00000482728 CYB561D1Q8N8Q1 229 aa13□□□□□ -0.33
SMIM4-204ENST00000482728 SFT2D1Q8WV19 159 aa13□□□□□ -0.33
SMIM4-204ENST00000482728 ATG101Q9BSB4 218 aa13□□□□□ -0.33
SMIM4-204ENST00000482728 LYSTQ99698 3801 aa13□□□□□ -0.33
SMIM4-204ENST00000482728 FBLL1A6NHQ2 334 aaKnown RBP12.99□□□□□ -0.33
SMIM4-204ENST00000482728 C1QBP02746 253 aa12.99□□□□□ -0.33
SMIM4-204ENST00000482728 FLI1Q01543 452 aaPredicted RBP12.99□□□□□ -0.33
SMIM4-204ENST00000482728 EIF5AL1Q6IS14 154 aaKnown RBP12.99□□□□□ -0.33
SMIM4-204ENST00000482728 TMEM88Q6PEY1 159 aa12.99□□□□□ -0.33
SMIM4-204ENST00000482728 DPPA3Q6W0C5 159 aa12.99□□□□□ -0.33
SMIM4-204ENST00000482728 TP53TG3Q9ULZ0 132 aa12.99□□□□□ -0.33
SMIM4-204ENST00000482728 PSG8Q9UQ74 426 aa12.99□□□□□ -0.33
SMIM4-204ENST00000482728 FAM74A7A6NL05 159 aa12.98□□□□□ -0.33
SMIM4-204ENST00000482728 PPT1P50897 306 aa12.98□□□□□ -0.33
SMIM4-204ENST00000482728 IBA57Q5T440 356 aaKnown RBP12.98□□□□□ -0.33
SMIM4-204ENST00000482728 PRNTQ86SH4 94 aa12.98□□□□□ -0.33
SMIM4-204ENST00000482728 C11orf72Q8NBR9 251 aa12.98□□□□□ -0.33
SMIM4-204ENST00000482728 MBD3L1Q8WWY6 194 aa12.98□□□□□ -0.33
SMIM4-204ENST00000482728 TVP23CQ96ET8 276 aa12.98□□□□□ -0.33
SMIM4-204ENST00000482728 NAGKQ9UJ70 344 aa12.98□□□□□ -0.33
SMIM4-204ENST00000482728 KLF12Q9Y4X4 402 aa12.98□□□□□ -0.33
SMIM4-204ENST00000482728 ALMS1Q8TCU4 4167 aa12.98□□□□□ -0.33
SMIM4-204ENST00000482728 TRGV1A0A0A0MS02 117 aa12.97□□□□□ -0.33
SMIM4-204ENST00000482728 TRAV21A0A0B4J279 112 aa12.97□□□□□ -0.33
SMIM4-204ENST00000482728 F6UZH7 168 aa12.97□□□□□ -0.33
SMIM4-204ENST00000482728 P0DMU3 169 aa12.97□□□□□ -0.33
SMIM4-204ENST00000482728 FAM231AP0DMU4 169 aa12.97□□□□□ -0.33
SMIM4-204ENST00000482728 FAM231CP0DMU5 169 aa12.97□□□□□ -0.33
SMIM4-204ENST00000482728 TCL1AP56279 114 aa12.97□□□□□ -0.33
SMIM4-204ENST00000482728 ZNF415Q09FC8 603 aa12.97□□□□□ -0.33
SMIM4-204ENST00000482728 SAPCD1Q5SSQ6 148 aa12.97□□□□□ -0.33
SMIM4-204ENST00000482728 CST9LP1Q5W188 147 aa12.97□□□□□ -0.33
SMIM4-204ENST00000482728 Q6ZTI0 123 aa12.97□□□□□ -0.33
SMIM4-204ENST00000482728 LINC00612Q8N6U2 182 aa12.97□□□□□ -0.33
SMIM4-204ENST00000482728 TMEM75Q8N9X5 138 aa12.97□□□□□ -0.33
SMIM4-204ENST00000482728 TRGV2A0A075B6R0 118 aa12.96□□□□□ -0.33
SMIM4-204ENST00000482728 H2AFB1P0C5Y9 115 aa12.96□□□□□ -0.33
SMIM4-204ENST00000482728 OR5I1Q13606 314 aa12.96□□□□□ -0.33
SMIM4-204ENST00000482728 TMEM183BQ1AE95 376 aa12.96□□□□□ -0.33
SMIM4-204ENST00000482728 ZFP69Q49AA0 526 aa12.96□□□□□ -0.33
SMIM4-204ENST00000482728 TMEM183AQ8IXX5 376 aa12.96□□□□□ -0.33
SMIM4-204ENST00000482728 HIST1H2BAQ96A08 127 aa12.96□□□□□ -0.33
SMIM4-204ENST00000482728 TRGV11A0A075B6L2 103 aa12.95□□□□□ -0.34
SMIM4-204ENST00000482728 TRAV34A0A0B4J273 112 aa12.95□□□□□ -0.34
SMIM4-204ENST00000482728 A0A1B0GV50 99 aa12.95□□□□□ -0.34
SMIM4-204ENST00000482728 PEX7O00628 323 aa12.95□□□□□ -0.34
SMIM4-204ENST00000482728 IGLV2-11P01706 119 aa12.95□□□□□ -0.34
SMIM4-204ENST00000482728 C15orf53Q8NAA6 179 aa12.95□□□□□ -0.34
SMIM4-204ENST00000482728 LINC00479Q96M42 142 aa12.95□□□□□ -0.34
SMIM4-204ENST00000482728 DNAH1Q9P2D7 4330 aa12.95□□□□□ -0.34
SMIM4-204ENST00000482728 RYR2Q92736 4967 aa12.94□□□□□ -0.34
SMIM4-204ENST00000482728 SPINK4O60575 86 aa12.94□□□□□ -0.34
SMIM4-204ENST00000482728 RAB5CP51148 216 aa12.94□□□□□ -0.34
SMIM4-204ENST00000482728 SMUG1Q53HV7 270 aa12.94□□□□□ -0.34
SMIM4-204ENST00000482728 KCNS1Q96KK3 526 aa12.94□□□□□ -0.34
SMIM4-204ENST00000482728 C8orf49Q96NF6 230 aa12.94□□□□□ -0.34
SMIM4-204ENST00000482728 PAGE4O60829 102 aa12.93□□□□□ -0.34
SMIM4-204ENST00000482728 GCGP01275 180 aa12.93□□□□□ -0.34
SMIM4-204ENST00000482728 LGALS9BQ3B8N2 356 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms