RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 ARPC5LQ9BPX5 153 aa8.34□□□□□ -1.07
HMGN1-213ENST00000482192 RPH3ALQ9UNE2 315 aa8.34□□□□□ -1.07
HMGN1-213ENST00000482192 TRGV2A0A075B6R0 118 aa8.33□□□□□ -1.08
HMGN1-213ENST00000482192 G3V3Q6 166 aa8.33□□□□□ -1.08
HMGN1-213ENST00000482192 ARPC5O15511 151 aa8.33□□□□□ -1.08
HMGN1-213ENST00000482192 CXorf1O96002 111 aa8.33□□□□□ -1.08
HMGN1-213ENST00000482192 GCHFRP30047 84 aa8.33□□□□□ -1.08
HMGN1-213ENST00000482192 TCL1AP56279 114 aa8.33□□□□□ -1.08
HMGN1-213ENST00000482192 OR5I1Q13606 314 aa8.33□□□□□ -1.08
HMGN1-213ENST00000482192 Q6ZQT7 251 aa8.33□□□□□ -1.08
HMGN1-213ENST00000482192 GOLT1AQ6ZVE7 132 aa8.33□□□□□ -1.08
HMGN1-213ENST00000482192 ST6GAL2Q96JF0 529 aa8.33□□□□□ -1.08
HMGN1-213ENST00000482192 C18orf15Q96N68 181 aa8.33□□□□□ -1.08
HMGN1-213ENST00000482192 ATG101Q9BSB4 218 aa8.33□□□□□ -1.08
HMGN1-213ENST00000482192 ACTR3CQ9C0K3 210 aaPredicted RBP8.33□□□□□ -1.08
HMGN1-213ENST00000482192 EPPK1P58107 5090 aaKnown RBP8.32□□□□□ -1.08
HMGN1-213ENST00000482192 TRAV26-1A0A087WT03 109 aa8.32□□□□□ -1.08
HMGN1-213ENST00000482192 TRGV1A0A0A0MS02 117 aa8.32□□□□□ -1.08
HMGN1-213ENST00000482192 SERTM2A0A1B0GWG4 89 aa8.32□□□□□ -1.08
HMGN1-213ENST00000482192 TAAR5O14804 337 aa8.32□□□□□ -1.08
HMGN1-213ENST00000482192 HOXA5P20719 270 aa8.32□□□□□ -1.08
HMGN1-213ENST00000482192 LGALS9BQ3B8N2 356 aa8.32□□□□□ -1.08
HMGN1-213ENST00000482192 Q6AWC8 147 aa8.32□□□□□ -1.08
HMGN1-213ENST00000482192 SUN5Q8TC36 379 aa8.32□□□□□ -1.08
HMGN1-213ENST00000482192 TMPRSS5Q9H3S3 457 aa8.32□□□□□ -1.08
HMGN1-213ENST00000482192 TMEM167BQ9NRX6 74 aa8.32□□□□□ -1.08
HMGN1-213ENST00000482192 TP53TG3Q9ULZ0 132 aa8.32□□□□□ -1.08
HMGN1-213ENST00000482192 KLF12Q9Y4X4 402 aa8.32□□□□□ -1.08
HMGN1-213ENST00000482192 H3BNG1 76 aa8.31□□□□□ -1.08
HMGN1-213ENST00000482192 M0R2N4 97 aa8.31□□□□□ -1.08
HMGN1-213ENST00000482192 SPINK4O60575 86 aa8.31□□□□□ -1.08
HMGN1-213ENST00000482192 CCL18P55774 89 aa8.31□□□□□ -1.08
HMGN1-213ENST00000482192 GNG5P63218 68 aa8.31□□□□□ -1.08
HMGN1-213ENST00000482192 ZNF415Q09FC8 603 aa8.31□□□□□ -1.08
HMGN1-213ENST00000482192 MUC21Q5SSG8 566 aa8.31□□□□□ -1.08
HMGN1-213ENST00000482192 LINC00336Q6ZUF6 198 aa8.31□□□□□ -1.08
HMGN1-213ENST00000482192 C5orf17Q8NAS9 161 aa8.31□□□□□ -1.08
HMGN1-213ENST00000482192 IGLV2-18A0A075B6J9 118 aa8.3□□□□□ -1.08
HMGN1-213ENST00000482192 TRAV8-1A0A0A6YYK1 113 aa8.3□□□□□ -1.08
HMGN1-213ENST00000482192 K7EQM0 130 aa8.3□□□□□ -1.08
HMGN1-213ENST00000482192 TCRAP04437 139 aa8.3□□□□□ -1.08
HMGN1-213ENST00000482192 FAM159AQ6UWV7 190 aa8.3□□□□□ -1.08
HMGN1-213ENST00000482192 IQCF2Q8IXL9 164 aa8.3□□□□□ -1.08
HMGN1-213ENST00000482192 NDFIP1Q9BT67 221 aa8.3□□□□□ -1.08
HMGN1-213ENST00000482192 TREM1Q9NP99 234 aa8.3□□□□□ -1.08
HMGN1-213ENST00000482192 TRGV11A0A075B6L2 103 aa8.29□□□□□ -1.08
HMGN1-213ENST00000482192 A0A0J9YY99 117 aa8.29□□□□□ -1.08
HMGN1-213ENST00000482192 CTXND1A0A1B0GTU2 59 aa8.29□□□□□ -1.08
HMGN1-213ENST00000482192 GGTLC3B5MD39 225 aa8.29□□□□□ -1.08
HMGN1-213ENST00000482192 TDRG1Q3Y452 100 aa8.29□□□□□ -1.08
HMGN1-213ENST00000482192 AKR1C8PQ5T2L2 129 aa8.29□□□□□ -1.08
HMGN1-213ENST00000482192 Q6ZR54 194 aa8.29□□□□□ -1.08
HMGN1-213ENST00000482192 SSX7Q7RTT5 188 aa8.29□□□□□ -1.08
HMGN1-213ENST00000482192 MRPL16Q9NX20 251 aaKnown RBP8.29□□□□□ -1.08
HMGN1-213ENST00000482192 NAGKQ9UJ70 344 aa8.29□□□□□ -1.08
HMGN1-213ENST00000482192 TRAV21A0A0B4J279 112 aa8.28□□□□□ -1.08
HMGN1-213ENST00000482192 A0A1W2PRE2 83 aa8.28□□□□□ -1.08
HMGN1-213ENST00000482192 F6UZH7 168 aa8.28□□□□□ -1.08
HMGN1-213ENST00000482192 SMLR1H3BR10 107 aa8.28□□□□□ -1.08
HMGN1-213ENST00000482192 SUMO1P63165 101 aaKnown RBP8.28□□□□□ -1.08
HMGN1-213ENST00000482192 ZNF345Q14585 488 aa8.28□□□□□ -1.08
HMGN1-213ENST00000482192 ZNF726P1Q15940 193 aa8.28□□□□□ -1.08
HMGN1-213ENST00000482192 TMEM183BQ1AE95 376 aa8.28□□□□□ -1.08
HMGN1-213ENST00000482192 TMEM183AQ8IXX5 376 aa8.28□□□□□ -1.08
HMGN1-213ENST00000482192 ZNRF2Q8NHG8 242 aa8.28□□□□□ -1.08
HMGN1-213ENST00000482192 TVP23CQ96ET8 276 aa8.28□□□□□ -1.08
HMGN1-213ENST00000482192 CYTL1Q9NRR1 136 aa8.28□□□□□ -1.08
HMGN1-213ENST00000482192 MDFICQ9P1T7 246 aa8.28□□□□□ -1.08
HMGN1-213ENST00000482192 EPDR1Q9UM22 224 aa8.28□□□□□ -1.08
HMGN1-213ENST00000482192 LINC00588Q9Y4M8 146 aa8.28□□□□□ -1.08
HMGN1-213ENST00000482192 FBLL1A6NHQ2 334 aaKnown RBP8.27□□□□□ -1.09
HMGN1-213ENST00000482192 SOHLH1Q5JUK2 328 aa8.27□□□□□ -1.09
HMGN1-213ENST00000482192 KCNRGQ8N5I3 272 aa8.27□□□□□ -1.09
HMGN1-213ENST00000482192 CYB561D1Q8N8Q1 229 aa8.27□□□□□ -1.09
HMGN1-213ENST00000482192 SGK494Q96LW2 274 aa8.27□□□□□ -1.09
HMGN1-213ENST00000482192 SPXQ9BT56 116 aa8.27□□□□□ -1.09
HMGN1-213ENST00000482192 HMSDA8MTL9 139 aa8.26□□□□□ -1.09
HMGN1-213ENST00000482192 RTL8CO15255 209 aa8.26□□□□□ -1.09
HMGN1-213ENST00000482192 IGLV2-11P01706 119 aa8.26□□□□□ -1.09
HMGN1-213ENST00000482192 FLI1Q01543 452 aaPredicted RBP8.26□□□□□ -1.09
HMGN1-213ENST00000482192 ZFP69Q49AA0 526 aa8.26□□□□□ -1.09
HMGN1-213ENST00000482192 TMEM75Q8N9X5 138 aa8.26□□□□□ -1.09
HMGN1-213ENST00000482192 RASL10AQ92737 203 aa8.26□□□□□ -1.09
HMGN1-213ENST00000482192 VSIG2Q96IQ7 327 aa8.26□□□□□ -1.09
HMGN1-213ENST00000482192 KCNS1Q96KK3 526 aa8.26□□□□□ -1.09
HMGN1-213ENST00000482192 NKX6-2Q9C056 277 aaPredicted RBP8.26□□□□□ -1.09
HMGN1-213ENST00000482192 SDF2L1Q9HCN8 221 aa8.26□□□□□ -1.09
HMGN1-213ENST00000482192 PSG8Q9UQ74 426 aa8.26□□□□□ -1.09
HMGN1-213ENST00000482192 IGHV3-16A0A0C4DH30 117 aa8.25□□□□□ -1.09
HMGN1-213ENST00000482192 NBDYA0A0U1RRE5 68 aa8.25□□□□□ -1.09
HMGN1-213ENST00000482192 MAP1LC3B2A6NCE7 125 aa8.25□□□□□ -1.09
HMGN1-213ENST00000482192 PRSS29PA6NIE9 313 aa8.25□□□□□ -1.09
HMGN1-213ENST00000482192 IFNA7P01567 189 aa8.25□□□□□ -1.09
HMGN1-213ENST00000482192 IGHV3-53P01767 116 aa8.25□□□□□ -1.09
HMGN1-213ENST00000482192 FGF8P55075 233 aaPredicted RBP8.25□□□□□ -1.09
HMGN1-213ENST00000482192 SLAQ13239 276 aa8.25□□□□□ -1.09
HMGN1-213ENST00000482192 SAPCD1Q5SSQ6 148 aa8.25□□□□□ -1.09
HMGN1-213ENST00000482192 C1orf134Q5TEV5 83 aa8.25□□□□□ -1.09
HMGN1-213ENST00000482192 PRNTQ86SH4 94 aa8.25□□□□□ -1.09
HMGN1-213ENST00000482192 MAP1LC3BQ9GZQ8 125 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms