RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 NIT1Q86X76 327 aa14.9□□□□□ -0.02
CCM2-214ENST00000481194 RAB37Q96AX2 223 aa14.9□□□□□ -0.02
CCM2-214ENST00000481194 ACACBO00763 2458 aa14.9□□□□□ -0.02
CCM2-214ENST00000481194 LGALS9O00182 355 aa14.9□□□□□ -0.02
CCM2-214ENST00000481194 PRB4P10163 310 aaPredicted RBP14.9□□□□□ -0.02
CCM2-214ENST00000481194 A8MWV9 139 aa14.89□□□□□ -0.03
CCM2-214ENST00000481194 VCYO14598 125 aa14.89□□□□□ -0.03
CCM2-214ENST00000481194 NDUFA11Q86Y39 141 aa14.89□□□□□ -0.03
CCM2-214ENST00000481194 CCDC140Q96MF4 163 aa14.89□□□□□ -0.03
CCM2-214ENST00000481194 HTN3P15516 51 aa14.89□□□□□ -0.03
CCM2-214ENST00000481194 KNCNA6PVL3 124 aa14.89□□□□□ -0.03
CCM2-214ENST00000481194 SLC25A34Q6PIV7 304 aa14.89□□□□□ -0.03
CCM2-214ENST00000481194 CRXO43186 299 aaPredicted RBP14.88□□□□□ -0.03
CCM2-214ENST00000481194 PLA2G2EQ9NZK7 142 aa14.88□□□□□ -0.03
CCM2-214ENST00000481194 XCL2Q9UBD3 114 aa14.88□□□□□ -0.03
CCM2-214ENST00000481194 COX6CP09669 75 aa14.88□□□□□ -0.03
CCM2-214ENST00000481194 INSL3P51460 131 aa14.88□□□□□ -0.03
CCM2-214ENST00000481194 AGPAT4-IT1Q9H0P7 198 aa14.88□□□□□ -0.03
CCM2-214ENST00000481194 RNASE1P07998 156 aaKnown RBP14.87□□□□□ -0.03
CCM2-214ENST00000481194 PSMG3-AS1Q96PY0 264 aa14.87□□□□□ -0.03
CCM2-214ENST00000481194 ANXA2RQ3ZCQ2 193 aa14.87□□□□□ -0.03
CCM2-214ENST00000481194 TRPT1Q86TN4 253 aaKnown RBP14.87□□□□□ -0.03
CCM2-214ENST00000481194 LOC102724200A0A096LPH7 203 aaPredicted RBP14.87□□□□□ -0.03
CCM2-214ENST00000481194 HIST2H2BCQ6DN03 193 aa14.87□□□□□ -0.03
CCM2-214ENST00000481194 UBE2CO00762 179 aa14.86□□□□□ -0.03
CCM2-214ENST00000481194 AKAP6Q13023 2319 aa14.86□□□□□ -0.03
CCM2-214ENST00000481194 IGLC2P0DOY2 106 aa14.86□□□□□ -0.03
CCM2-214ENST00000481194 C14orf178Q8N769 122 aaPredicted RBP14.86□□□□□ -0.03
CCM2-214ENST00000481194 C18orf15Q96N68 181 aa14.86□□□□□ -0.03
CCM2-214ENST00000481194 EVI2AP22794 236 aa14.86□□□□□ -0.03
CCM2-214ENST00000481194 DDTP30046 118 aa14.86□□□□□ -0.03
CCM2-214ENST00000481194 MORN5Q5VZ52 161 aa14.86□□□□□ -0.03
CCM2-214ENST00000481194 DMRT1Q9Y5R6 373 aa14.86□□□□□ -0.03
CCM2-214ENST00000481194 CIRBPQ14011 172 aaKnown RBP14.85□□□□□ -0.03
CCM2-214ENST00000481194 K7ERU9 68 aa14.85□□□□□ -0.03
CCM2-214ENST00000481194 PYGO2Q9BRQ0 406 aa14.85□□□□□ -0.03
CCM2-214ENST00000481194 ZNF876PQ49A33 203 aa14.85□□□□□ -0.03
CCM2-214ENST00000481194 TMEM158Q8WZ71 300 aa14.85□□□□□ -0.03
CCM2-214ENST00000481194 FABP2P12104 132 aa14.85□□□□□ -0.03
CCM2-214ENST00000481194 LINC00518Q8N0U6 118 aa14.85□□□□□ -0.03
CCM2-214ENST00000481194 VCX2Q9H322 139 aa14.85□□□□□ -0.03
CCM2-214ENST00000481194 KLF12Q9Y4X4 402 aa14.85□□□□□ -0.03
CCM2-214ENST00000481194 C9orf47Q6ZRZ4 202 aa14.84□□□□□ -0.03
CCM2-214ENST00000481194 LY6G6DO95868 133 aa14.84□□□□□ -0.03
CCM2-214ENST00000481194 FAM104BQ5XKR9 115 aa14.84□□□□□ -0.03
CCM2-214ENST00000481194 DEFB121Q5J5C9 76 aa14.84□□□□□ -0.03
CCM2-214ENST00000481194 OR11H2Q8NH07 326 aa14.84□□□□□ -0.03
CCM2-214ENST00000481194 CITED2Q99967 270 aaPredicted RBP14.84□□□□□ -0.03
CCM2-214ENST00000481194 DOCK11Q5JSL3 2073 aa14.83□□□□□ -0.04
CCM2-214ENST00000481194 LINC01548A6NM66 108 aa14.83□□□□□ -0.04
CCM2-214ENST00000481194 FAM19A2Q8N3H0 131 aa14.83□□□□□ -0.04
CCM2-214ENST00000481194 HLA-DMBP28068 263 aa14.83□□□□□ -0.04
CCM2-214ENST00000481194 KLK9Q9UKQ9 250 aa14.83□□□□□ -0.04
CCM2-214ENST00000481194 A8MWP6 167 aa14.83□□□□□ -0.04
CCM2-214ENST00000481194 HINT1P49773 126 aaPredicted RBP14.83□□□□□ -0.04
CCM2-214ENST00000481194 IGF2BP2-AS1Q96M15 143 aa14.83□□□□□ -0.04
CCM2-214ENST00000481194 TMEM160Q9NX00 188 aa14.83□□□□□ -0.04
CCM2-214ENST00000481194 Q0VG73 95 aa14.82□□□□□ -0.04
CCM2-214ENST00000481194 GAGE10A6NGK3 116 aa14.82□□□□□ -0.04
CCM2-214ENST00000481194 NCR2O95944 276 aa14.82□□□□□ -0.04
CCM2-214ENST00000481194 KRTAP10-9P60411 292 aa14.82□□□□□ -0.04
CCM2-214ENST00000481194 DNLZQ5SXM8 178 aa14.82□□□□□ -0.04
CCM2-214ENST00000481194 AMN1Q8IY45 258 aa14.82□□□□□ -0.04
CCM2-214ENST00000481194 K7EN84 100 aa14.82□□□□□ -0.04
CCM2-214ENST00000481194 SUMO2P61956 95 aaKnown RBP14.82□□□□□ -0.04
CCM2-214ENST00000481194 JOSD1Q15040 202 aaPredicted RBP14.82□□□□□ -0.04
CCM2-214ENST00000481194 ZNF702PQ9H963 129 aa14.81□□□□□ -0.04
CCM2-214ENST00000481194 HIST1H4GQ99525 98 aa14.81□□□□□ -0.04
CCM2-214ENST00000481194 Q6ZSV7 163 aa14.81□□□□□ -0.04
CCM2-214ENST00000481194 TMEM170BQ5T4T1 132 aa14.81□□□□□ -0.04
CCM2-214ENST00000481194 TRBV7-9A0A0J9YWB2 115 aa14.8□□□□□ -0.04
CCM2-214ENST00000481194 WIPF2Q8TF74 440 aaPredicted RBP14.8□□□□□ -0.04
CCM2-214ENST00000481194 PRR14LQ5THK1 2151 aa14.8□□□□□ -0.04
CCM2-214ENST00000481194 ASPHD1Q5U4P2 390 aa14.8□□□□□ -0.04
CCM2-214ENST00000481194 HIST3H2BBQ8N257 126 aa14.8□□□□□ -0.04
CCM2-214ENST00000481194 HILS1P60008 231 aa14.8□□□□□ -0.04
CCM2-214ENST00000481194 IFI27L1Q96BM0 104 aa14.8□□□□□ -0.04
CCM2-214ENST00000481194 INAFM1C9JVW0 142 aa14.79□□□□□ -0.04
CCM2-214ENST00000481194 CD28P10747 220 aa14.79□□□□□ -0.04
CCM2-214ENST00000481194 ZNF580Q9UK33 172 aa14.79□□□□□ -0.04
CCM2-214ENST00000481194 TRAV12-2A0A075B6T6 113 aa14.79□□□□□ -0.04
CCM2-214ENST00000481194 CSTL1Q9H114 145 aa14.79□□□□□ -0.04
CCM2-214ENST00000481194 TCTAP57738 103 aa14.79□□□□□ -0.04
CCM2-214ENST00000481194 DPM2O94777 84 aa14.79□□□□□ -0.04
CCM2-214ENST00000481194 TRBV12-3P01733 135 aa14.79□□□□□ -0.04
CCM2-214ENST00000481194 AZU1P20160 251 aa14.79□□□□□ -0.04
CCM2-214ENST00000481194 C20orf144Q9BQM9 153 aa14.79□□□□□ -0.04
CCM2-214ENST00000481194 TRAV2A0A0B4J234 112 aa14.79□□□□□ -0.04
CCM2-214ENST00000481194 TMEM213A2RRL7 107 aa14.79□□□□□ -0.04
CCM2-214ENST00000481194 M0R2P5 195 aa14.79□□□□□ -0.04
CCM2-214ENST00000481194 TNFRSF6BO95407 300 aa14.79□□□□□ -0.04
CCM2-214ENST00000481194 CRIP2P52943 208 aaPredicted RBP14.79□□□□□ -0.04
CCM2-214ENST00000481194 PRSS2P07478 247 aa14.78□□□□□ -0.04
CCM2-214ENST00000481194 UNQ9165/PRO28630Q6UXU0 137 aa14.78□□□□□ -0.04
CCM2-214ENST00000481194 CHD9Q3L8U1 2897 aa14.78□□□□□ -0.04
CCM2-214ENST00000481194 TEX48A0A1B0GUV7 120 aa14.78□□□□□ -0.04
CCM2-214ENST00000481194 A0A087WWL8 130 aa14.77□□□□□ -0.04
CCM2-214ENST00000481194 PSMB8P28062 276 aa14.77□□□□□ -0.04
CCM2-214ENST00000481194 TLN1Q9Y490 2541 aaKnown RBP14.77□□□□□ -0.04
CCM2-214ENST00000481194 ADARB2-AS1A8MUL3 147 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms