RNA–Protein interactions for RNA: ENST00000481019.5

PTPRF-213, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 459 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-213ENST00000481019 HLA-DRB4X5D2U9 266 aa8.9□□□□□ -0.98
PTPRF-213ENST00000481019 SLC17A3O00476 420 aa8.89□□□□□ -0.99
PTPRF-213ENST00000481019 RHEBQ15382 184 aa8.89□□□□□ -0.99
PTPRF-213ENST00000481019 CASC10Q5T4H9 136 aa8.89□□□□□ -0.99
PTPRF-213ENST00000481019 BAGE2Q86Y30 109 aa8.89□□□□□ -0.99
PTPRF-213ENST00000481019 OR10J6PQ8NGY7 276 aa8.89□□□□□ -0.99
PTPRF-213ENST00000481019 LINC00477Q96M19 166 aa8.89□□□□□ -0.99
PTPRF-213ENST00000481019 SDF2L1Q9HCN8 221 aa8.89□□□□□ -0.99
PTPRF-213ENST00000481019 A0A0J9YX75 114 aa8.88□□□□□ -0.99
PTPRF-213ENST00000481019 PPP1R2P9O14990 202 aa8.88□□□□□ -0.99
PTPRF-213ENST00000481019 DEFB4AO15263 64 aa8.88□□□□□ -0.99
PTPRF-213ENST00000481019 MT-ND4LP03901 98 aa8.88□□□□□ -0.99
PTPRF-213ENST00000481019 FLI1Q01543 452 aaPredicted RBP8.88□□□□□ -0.99
PTPRF-213ENST00000481019 TMEM78Q5T7P6 136 aa8.88□□□□□ -0.99
PTPRF-213ENST00000481019 FOXI2Q6ZQN5 318 aa8.88□□□□□ -0.99
PTPRF-213ENST00000481019 GOLT1AQ6ZVE7 132 aa8.88□□□□□ -0.99
PTPRF-213ENST00000481019 ZNF738Q8NE65 137 aa8.88□□□□□ -0.99
PTPRF-213ENST00000481019 OR11H2Q8NH07 326 aa8.88□□□□□ -0.99
PTPRF-213ENST00000481019 RPH3ALQ9UNE2 315 aa8.88□□□□□ -0.99
PTPRF-213ENST00000481019 LENEPQ9Y5L5 61 aa8.88□□□□□ -0.99
PTPRF-213ENST00000481019 VPS13DQ5THJ4 4388 aa8.88□□□□□ -0.99
PTPRF-213ENST00000481019 C3orf84H3BNL1 204 aa8.87□□□□□ -0.99
PTPRF-213ENST00000481019 ADCYAP1P18509 176 aa8.87□□□□□ -0.99
PTPRF-213ENST00000481019 MORN3Q6PF18 240 aaPredicted RBP8.87□□□□□ -0.99
PTPRF-213ENST00000481019 AMTNQ6UX39 209 aa8.87□□□□□ -0.99
PTPRF-213ENST00000481019 CLRN3Q8NCR9 226 aa8.87□□□□□ -0.99
PTPRF-213ENST00000481019 ANAPC16Q96DE5 110 aa8.87□□□□□ -0.99
PTPRF-213ENST00000481019 CTDSP1Q9GZU7 261 aa8.87□□□□□ -0.99
PTPRF-213ENST00000481019 PPP1R14DQ9NXH3 145 aa8.87□□□□□ -0.99
PTPRF-213ENST00000481019 XCL2Q9UBD3 114 aa8.87□□□□□ -0.99
PTPRF-213ENST00000481019 X6R8D5 127 aa8.87□□□□□ -0.99
PTPRF-213ENST00000481019 TRBV7-9A0A0J9YWB2 115 aa8.86□□□□□ -0.99
PTPRF-213ENST00000481019 A8MTW9 85 aa8.86□□□□□ -0.99
PTPRF-213ENST00000481019 ZNF705FA8MVS1 300 aaPredicted RBP8.86□□□□□ -0.99
PTPRF-213ENST00000481019 PRAC2D3DTV9 90 aa8.86□□□□□ -0.99
PTPRF-213ENST00000481019 M0R3E3 92 aa8.86□□□□□ -0.99
PTPRF-213ENST00000481019 DUSP14O95147 198 aaKnown RBP8.86□□□□□ -0.99
PTPRF-213ENST00000481019 GNG5P63218 68 aa8.86□□□□□ -0.99
PTPRF-213ENST00000481019 ADIRFQ15847 76 aa8.86□□□□□ -0.99
PTPRF-213ENST00000481019 CENPWQ5EE01 88 aa8.86□□□□□ -0.99
PTPRF-213ENST00000481019 EBLN2Q6P2I7 272 aa8.86□□□□□ -0.99
PTPRF-213ENST00000481019 C15orf54Q8N8G6 183 aa8.86□□□□□ -0.99
PTPRF-213ENST00000481019 OR4B1Q8NGF8 309 aa8.86□□□□□ -0.99
PTPRF-213ENST00000481019 IL17DQ8TAD2 202 aa8.86□□□□□ -0.99
PTPRF-213ENST00000481019 PSG8Q9UQ74 426 aa8.86□□□□□ -0.99
PTPRF-213ENST00000481019 A0A087WWC5 75 aa8.85□□□□□ -0.99
PTPRF-213ENST00000481019 LTAP01374 205 aa8.85□□□□□ -0.99
PTPRF-213ENST00000481019 RBMY1A1P0DJD3 496 aaKnown RBP8.85□□□□□ -0.99
PTPRF-213ENST00000481019 RBMY1CP0DJD4 496 aa8.85□□□□□ -0.99
PTPRF-213ENST00000481019 CT45A10P0DMU9 189 aa8.85□□□□□ -0.99
PTPRF-213ENST00000481019 RPL23P62829 140 aaKnown RBP8.85□□□□□ -0.99
PTPRF-213ENST00000481019 RBMY1FQ15415 496 aaKnown RBP8.85□□□□□ -0.99
PTPRF-213ENST00000481019 C9orf47Q6ZRZ4 202 aa8.85□□□□□ -0.99
PTPRF-213ENST00000481019 LINC01551Q86U37 167 aa8.85□□□□□ -0.99
PTPRF-213ENST00000481019 TMEM183AQ8IXX5 376 aa8.85□□□□□ -0.99
PTPRF-213ENST00000481019 Q8NAQ8 132 aa8.85□□□□□ -0.99
PTPRF-213ENST00000481019 DAZAP1Q96EP5 407 aaKnown RBP8.85□□□□□ -0.99
PTPRF-213ENST00000481019 DERL1Q9BUN8 251 aa8.85□□□□□ -0.99
PTPRF-213ENST00000481019 TMEM242Q9NWH2 141 aa8.85□□□□□ -0.99
PTPRF-213ENST00000481019 IGHV4-28A0A0C4DH34 117 aa8.84□□□□□ -0.99
PTPRF-213ENST00000481019 CXorf65A6NEN9 183 aa8.84□□□□□ -0.99
PTPRF-213ENST00000481019 ZNF138P52744 262 aa8.84□□□□□ -0.99
PTPRF-213ENST00000481019 PRNTQ86SH4 94 aa8.84□□□□□ -0.99
PTPRF-213ENST00000481019 OCC1Q8TAD7 63 aa8.84□□□□□ -0.99
PTPRF-213ENST00000481019 CLUHP3Q96NS8 147 aa8.84□□□□□ -0.99
PTPRF-213ENST00000481019 RPS10P5Q9NQ39 176 aa8.84□□□□□ -0.99
PTPRF-213ENST00000481019 TRAV34A0A0B4J273 112 aa8.83□□□□□ -1
PTPRF-213ENST00000481019 C7orf77A4D0Y5 90 aa8.83□□□□□ -1
PTPRF-213ENST00000481019 GCGP01275 180 aa8.83□□□□□ -1
PTPRF-213ENST00000481019 MGST1P10620 155 aaKnown RBP8.83□□□□□ -1
PTPRF-213ENST00000481019 RPL19P84098 196 aaKnown RBP8.83□□□□□ -1
PTPRF-213ENST00000481019 COX8CQ7Z4L0 72 aa8.83□□□□□ -1
PTPRF-213ENST00000481019 C1orf158Q8N1D5 194 aa8.83□□□□□ -1
PTPRF-213ENST00000481019 OR8A1Q8NGG7 326 aa8.83□□□□□ -1
PTPRF-213ENST00000481019 BTF3L4Q96K17 158 aa8.83□□□□□ -1
PTPRF-213ENST00000481019 IGF2BP2-AS1Q96M15 143 aa8.83□□□□□ -1
PTPRF-213ENST00000481019 LINC00479Q96M42 142 aa8.83□□□□□ -1
PTPRF-213ENST00000481019 SMCO4Q9NRQ5 59 aa8.83□□□□□ -1
PTPRF-213ENST00000481019 M0R2Z0 102 aa8.82□□□□□ -1
PTPRF-213ENST00000481019 CRXO43186 299 aaPredicted RBP8.82□□□□□ -1
PTPRF-213ENST00000481019 PRM2P04554 102 aa8.82□□□□□ -1
PTPRF-213ENST00000481019 TSPOP30536 169 aa8.82□□□□□ -1
PTPRF-213ENST00000481019 ERVFC1-1P60608 527 aa8.82□□□□□ -1
PTPRF-213ENST00000481019 HIST1H1AQ02539 215 aaPredicted RBP8.82□□□□□ -1
PTPRF-213ENST00000481019 SMUG1Q53HV7 270 aa8.82□□□□□ -1
PTPRF-213ENST00000481019 FAM231DQ6ZW35 169 aa8.82□□□□□ -1
PTPRF-213ENST00000481019 Q86TA4 180 aa8.82□□□□□ -1
PTPRF-213ENST00000481019 OR10G8Q8NGN5 311 aa8.82□□□□□ -1
PTPRF-213ENST00000481019 ISOC2Q96AB3 205 aa8.82□□□□□ -1
PTPRF-213ENST00000481019 SFRP2Q96HF1 295 aa8.82□□□□□ -1
PTPRF-213ENST00000481019 ODF3Q96PU9 254 aa8.82□□□□□ -1
PTPRF-213ENST00000481019 MLST8Q9BVC4 326 aa8.82□□□□□ -1
PTPRF-213ENST00000481019 C11orf68Q9H3H3 251 aaKnown RBP8.82□□□□□ -1
PTPRF-213ENST00000481019 OSTCQ9NRP0 149 aa8.82□□□□□ -1
PTPRF-213ENST00000481019 TRBV20OR9-2A0A075B6H5 130 aa8.81□□□□□ -1
PTPRF-213ENST00000481019 IGKV2-40A0A087WW87 121 aaPredicted RBP8.81□□□□□ -1
PTPRF-213ENST00000481019 TRAV8-1A0A0A6YYK1 113 aa8.81□□□□□ -1
PTPRF-213ENST00000481019 XKRY2A2RUG3 117 aa8.81□□□□□ -1
PTPRF-213ENST00000481019 NPIPB6E9PJ23 425 aa8.81□□□□□ -1
PTPRF-213ENST00000481019 H7BYZ3 331 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms