RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 SDCBPO00560 298 aaPredicted RBP5.21□□□□□ -1.58
LSM5-210ENST00000480956 CD14P08571 375 aa5.21□□□□□ -1.58
LSM5-210ENST00000480956 GZMBP10144 247 aa5.21□□□□□ -1.58
LSM5-210ENST00000480956 MRPS36P82909 103 aaKnown RBP5.21□□□□□ -1.58
LSM5-210ENST00000480956 ZNF117Q03924 483 aa5.21□□□□□ -1.58
LSM5-210ENST00000480956 EBI3Q14213 229 aa5.21□□□□□ -1.58
LSM5-210ENST00000480956 FAM216BQ8N7L0 139 aa5.21□□□□□ -1.58
LSM5-210ENST00000480956 Q8N9P0 234 aaPredicted RBP5.21□□□□□ -1.58
LSM5-210ENST00000480956 COPS9Q8WXC6 57 aa5.21□□□□□ -1.58
LSM5-210ENST00000480956 FGF13Q92913 245 aa5.21□□□□□ -1.58
LSM5-210ENST00000480956 PKMYT1Q99640 499 aa5.21□□□□□ -1.58
LSM5-210ENST00000480956 Q9H521 79 aa5.21□□□□□ -1.58
LSM5-210ENST00000480956 RPRMQ9NS64 109 aa5.21□□□□□ -1.58
LSM5-210ENST00000480956 ASF1BQ9NVP2 202 aa5.21□□□□□ -1.58
LSM5-210ENST00000480956 TRAV12-2A0A075B6T6 113 aa5.2□□□□□ -1.58
LSM5-210ENST00000480956 IGHV3-53P01767 116 aa5.2□□□□□ -1.58
LSM5-210ENST00000480956 ZNF705BP0CI00 300 aaPredicted RBP5.2□□□□□ -1.58
LSM5-210ENST00000480956 LGALSLQ3ZCW2 172 aaPredicted RBP5.2□□□□□ -1.58
LSM5-210ENST00000480956 C4orf33Q8N1A6 199 aa5.2□□□□□ -1.58
LSM5-210ENST00000480956 C1orf64Q8NEQ6 169 aa5.2□□□□□ -1.58
LSM5-210ENST00000480956 SLC35B3Q9H1N7 401 aa5.2□□□□□ -1.58
LSM5-210ENST00000480956 TRBV20-1A0A075B6N2 111 aa5.2□□□□□ -1.58
LSM5-210ENST00000480956 KLF7O75840 302 aaPredicted RBP5.2□□□□□ -1.58
LSM5-210ENST00000480956 LINC01545Q5VT33 79 aa5.2□□□□□ -1.58
LSM5-210ENST00000480956 DYNAPQ8N1N2 210 aa5.2□□□□□ -1.58
LSM5-210ENST00000480956 MRPS24Q96EL2 167 aaKnown RBP5.2□□□□□ -1.58
LSM5-210ENST00000480956 NAA60Q9H7X0 242 aa5.2□□□□□ -1.58
LSM5-210ENST00000480956 SAR1AQ9NR31 198 aa5.2□□□□□ -1.58
LSM5-210ENST00000480956 LSM2Q9Y333 95 aaKnown RBP5.2□□□□□ -1.58
LSM5-210ENST00000480956 TIMM9Q9Y5J7 89 aa5.2□□□□□ -1.58
LSM5-210ENST00000480956 ABCA7Q8IZY2 2146 aa5.19□□□□□ -1.58
LSM5-210ENST00000480956 POLEQ07864 2286 aa5.19□□□□□ -1.58
LSM5-210ENST00000480956 ANAPC1Q9H1A4 1944 aa5.19□□□□□ -1.58
LSM5-210ENST00000480956 IGLV3-9A0A075B6K5 115 aa5.19□□□□□ -1.58
LSM5-210ENST00000480956 H3BPC8 53 aa5.19□□□□□ -1.58
LSM5-210ENST00000480956 K7EM74 188 aa5.19□□□□□ -1.58
LSM5-210ENST00000480956 TIMM17BO60830 172 aa5.19□□□□□ -1.58
LSM5-210ENST00000480956 CD2P06729 351 aa5.19□□□□□ -1.58
LSM5-210ENST00000480956 BRS3P32247 399 aa5.19□□□□□ -1.58
LSM5-210ENST00000480956 C9orf62Q8N4C0 152 aa5.19□□□□□ -1.58
LSM5-210ENST00000480956 AQP3Q92482 292 aa5.19□□□□□ -1.58
LSM5-210ENST00000480956 ZNF443Q9Y2A4 671 aaPredicted RBP5.19□□□□□ -1.58
LSM5-210ENST00000480956 SCN1AP35498 2009 aa5.18□□□□□ -1.58
LSM5-210ENST00000480956 TMEM235A6NFC5 223 aa5.18□□□□□ -1.58
LSM5-210ENST00000480956 RBP4P02753 201 aa5.18□□□□□ -1.58
LSM5-210ENST00000480956 C5orf17Q8NAS9 161 aa5.18□□□□□ -1.58
LSM5-210ENST00000480956 Q8NDZ9 215 aa5.18□□□□□ -1.58
LSM5-210ENST00000480956 CHCHD1Q96BP2 118 aaKnown RBP5.18□□□□□ -1.58
LSM5-210ENST00000480956 OR1I1O60431 355 aa5.17□□□□□ -1.58
LSM5-210ENST00000480956 MPC2O95563 127 aa5.17□□□□□ -1.58
LSM5-210ENST00000480956 IL4P05112 153 aa5.17□□□□□ -1.58
LSM5-210ENST00000480956 FABP4P15090 132 aa5.17□□□□□ -1.58
LSM5-210ENST00000480956 FOXF1Q12946 379 aa5.17□□□□□ -1.58
LSM5-210ENST00000480956 MRPL54Q6P161 138 aaKnown RBP5.17□□□□□ -1.58
LSM5-210ENST00000480956 BCL2L10Q9HD36 194 aa5.17□□□□□ -1.58
LSM5-210ENST00000480956 FKBP11Q9NYL4 201 aa5.17□□□□□ -1.58
LSM5-210ENST00000480956 V9GYS6 101 aa5.17□□□□□ -1.58
LSM5-210ENST00000480956 ARHGAP21Q5T5U3 1957 aa5.17□□□□□ -1.58
LSM5-210ENST00000480956 CITO14578 2027 aa5.17□□□□□ -1.58
LSM5-210ENST00000480956 AGRNO00468 2067 aa5.17□□□□□ -1.58
LSM5-210ENST00000480956 SPINK8P0C7L1 97 aa5.17□□□□□ -1.58
LSM5-210ENST00000480956 ZNF816Q0VGE8 651 aaPredicted RBP5.17□□□□□ -1.58
LSM5-210ENST00000480956 UBALD1Q8TB05 177 aa5.17□□□□□ -1.58
LSM5-210ENST00000480956 SEC11CQ9BY50 192 aa5.17□□□□□ -1.58
LSM5-210ENST00000480956 SCP2D1Q9UJQ7 156 aa5.17□□□□□ -1.58
LSM5-210ENST00000480956 IGKV3D-15A0A087WSY6 115 aa5.16□□□□□ -1.58
LSM5-210ENST00000480956 COX6A1P12074 109 aa5.16□□□□□ -1.58
LSM5-210ENST00000480956 PCBD1P61457 104 aa5.16□□□□□ -1.58
LSM5-210ENST00000480956 BLCAPP62952 87 aa5.16□□□□□ -1.58
LSM5-210ENST00000480956 AGPAT4-IT1Q9H0P7 198 aa5.16□□□□□ -1.58
LSM5-210ENST00000480956 NHP2Q9NX24 153 aaKnown RBP5.16□□□□□ -1.58
LSM5-210ENST00000480956 SCN8AQ9UQD0 1980 aa5.16□□□□□ -1.58
LSM5-210ENST00000480956 TP53BP1Q12888 1972 aaPredicted RBP5.15□□□□□ -1.58
LSM5-210ENST00000480956 CD3DP04234 171 aa5.15□□□□□ -1.58
LSM5-210ENST00000480956 DNAH10OSP0CZ25 163 aa5.15□□□□□ -1.58
LSM5-210ENST00000480956 SLC25A4P12235 298 aa5.15□□□□□ -1.58
LSM5-210ENST00000480956 FUSP35637 526 aaKnown RBP eCLIP5.15□□□□□ -1.58
LSM5-210ENST00000480956 ZNF90Q03938 601 aa5.15□□□□□ -1.58
LSM5-210ENST00000480956 Q6ZUT4 128 aa5.15□□□□□ -1.58
LSM5-210ENST00000480956 KRTAP7-1Q8IUC3 87 aa5.15□□□□□ -1.58
LSM5-210ENST00000480956 METTL1Q9UBP6 276 aaKnown RBP5.15□□□□□ -1.58
LSM5-210ENST00000480956 CHCHD2Q9Y6H1 151 aaPredicted RBP5.15□□□□□ -1.58
LSM5-210ENST00000480956 HSPE1-MOB4S4R3N1 261 aa5.15□□□□□ -1.58
LSM5-210ENST00000480956 ARID1AO14497 2285 aa5.15□□□□□ -1.59
LSM5-210ENST00000480956 PCM1Q15154 2024 aa5.15□□□□□ -1.59
LSM5-210ENST00000480956 IGLV4-69A0A075B6H9 119 aa5.14□□□□□ -1.59
LSM5-210ENST00000480956 TRAV7A0A075B6U4 112 aa5.14□□□□□ -1.59
LSM5-210ENST00000480956 PNMA8CA0A1B0GUJ8 204 aa5.14□□□□□ -1.59
LSM5-210ENST00000480956 GEMIN2O14893 280 aaKnown RBP5.14□□□□□ -1.59
LSM5-210ENST00000480956 PMP2P02689 132 aa5.14□□□□□ -1.59
LSM5-210ENST00000480956 CTSDP07339 412 aaPredicted RBP5.14□□□□□ -1.59
LSM5-210ENST00000480956 IFITM1P13164 125 aa5.14□□□□□ -1.59
LSM5-210ENST00000480956 Q56UQ5 140 aa5.14□□□□□ -1.59
LSM5-210ENST00000480956 SVBPQ8N300 66 aa5.14□□□□□ -1.59
LSM5-210ENST00000480956 C10orf111Q8N326 155 aa5.14□□□□□ -1.59
LSM5-210ENST00000480956 TTC9CQ8N5M4 171 aa5.14□□□□□ -1.59
LSM5-210ENST00000480956 ST20-AS1Q8NBB2 130 aa5.14□□□□□ -1.59
LSM5-210ENST00000480956 PLPP5Q8NEB5 264 aa5.14□□□□□ -1.59
LSM5-210ENST00000480956 SIP14410 1827 aa5.14□□□□□ -1.59
LSM5-210ENST00000480956 LAMA2P24043 3122 aaKnown RBP5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms