RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 KRTAP10-11P60412 298 aa12.96□□□□□ -0.33
UPF3A-206ENST00000480362 ERVFC1-1P60608 527 aa12.96□□□□□ -0.33
UPF3A-206ENST00000480362 EGFEM1PQ0D2K5 195 aa12.96□□□□□ -0.33
UPF3A-206ENST00000480362 RHEBQ15382 184 aa12.96□□□□□ -0.33
UPF3A-206ENST00000480362 RNF212Q495C1 297 aa12.96□□□□□ -0.33
UPF3A-206ENST00000480362 PRR9Q5T870 116 aa12.96□□□□□ -0.33
UPF3A-206ENST00000480362 TRPT1Q86TN4 253 aaKnown RBP12.96□□□□□ -0.33
UPF3A-206ENST00000480362 Q8N1Y9 231 aa12.96□□□□□ -0.33
UPF3A-206ENST00000480362 NUDT10Q8NFP7 164 aa12.96□□□□□ -0.33
UPF3A-206ENST00000480362 DAZAP1Q96EP5 407 aaKnown RBP12.96□□□□□ -0.33
UPF3A-206ENST00000480362 NUDT11Q96G61 164 aa12.96□□□□□ -0.33
UPF3A-206ENST00000480362 SFRP2Q96HF1 295 aa12.96□□□□□ -0.33
UPF3A-206ENST00000480362 AGRNO00468 2067 aa12.96□□□□□ -0.33
UPF3A-206ENST00000480362 VWFP04275 2813 aa12.95□□□□□ -0.34
UPF3A-206ENST00000480362 C19orf71A6NCJ1 209 aa12.95□□□□□ -0.34
UPF3A-206ENST00000480362 MT-ND4LP03901 98 aa12.95□□□□□ -0.34
UPF3A-206ENST00000480362 TSPOP30536 169 aa12.95□□□□□ -0.34
UPF3A-206ENST00000480362 RNASE4P34096 147 aaKnown RBP12.95□□□□□ -0.34
UPF3A-206ENST00000480362 FXYD7P58549 80 aa12.95□□□□□ -0.34
UPF3A-206ENST00000480362 KIR3DS1Q14943 382 aa12.95□□□□□ -0.34
UPF3A-206ENST00000480362 SPINK13Q1W4C9 94 aa12.95□□□□□ -0.34
UPF3A-206ENST00000480362 IBA57Q5T440 356 aaKnown RBP12.95□□□□□ -0.34
UPF3A-206ENST00000480362 SAMD5Q5TGI4 173 aa12.95□□□□□ -0.34
UPF3A-206ENST00000480362 FAM231DQ6ZW35 169 aa12.95□□□□□ -0.34
UPF3A-206ENST00000480362 OR10G8Q8NGN5 311 aa12.95□□□□□ -0.34
UPF3A-206ENST00000480362 OSTCQ9NRP0 149 aa12.95□□□□□ -0.34
UPF3A-206ENST00000480362 ZMAT5Q9UDW3 170 aaKnown RBP12.95□□□□□ -0.34
UPF3A-206ENST00000480362 FABP5P3A8MUU1 101 aa12.94□□□□□ -0.34
UPF3A-206ENST00000480362 KLLNB2CW77 178 aa12.94□□□□□ -0.34
UPF3A-206ENST00000480362 M0R2Z0 102 aa12.94□□□□□ -0.34
UPF3A-206ENST00000480362 SH2D1AO60880 128 aa12.94□□□□□ -0.34
UPF3A-206ENST00000480362 CDKN1BP46527 198 aa12.94□□□□□ -0.34
UPF3A-206ENST00000480362 FAM162BQ5T6X4 162 aa12.94□□□□□ -0.34
UPF3A-206ENST00000480362 C15orf54Q8N8G6 183 aa12.94□□□□□ -0.34
UPF3A-206ENST00000480362 TRRAPQ9Y4A5 3859 aa12.94□□□□□ -0.34
UPF3A-206ENST00000480362 TRAV12-2A0A075B6T6 113 aa12.93□□□□□ -0.34
UPF3A-206ENST00000480362 GATCO43716 136 aaKnown RBP12.93□□□□□ -0.34
UPF3A-206ENST00000480362 BTN1A1Q13410 526 aa12.93□□□□□ -0.34
UPF3A-206ENST00000480362 ANAPC16Q96DE5 110 aa12.93□□□□□ -0.34
UPF3A-206ENST00000480362 PPP1R2P9O14990 202 aa12.92□□□□□ -0.34
UPF3A-206ENST00000480362 P01737 135 aa12.92□□□□□ -0.34
UPF3A-206ENST00000480362 PFN1P07737 140 aaKnown RBP12.92□□□□□ -0.34
UPF3A-206ENST00000480362 RPL35AP18077 110 aaKnown RBP12.92□□□□□ -0.34
UPF3A-206ENST00000480362 Q6ZQT7 251 aa12.92□□□□□ -0.34
UPF3A-206ENST00000480362 CTDSP1Q9GZU7 261 aa12.92□□□□□ -0.34
UPF3A-206ENST00000480362 SRD5A3Q9H8P0 318 aa12.92□□□□□ -0.34
UPF3A-206ENST00000480362 NOTCH3Q9UM47 2321 aa12.91□□□□□ -0.34
UPF3A-206ENST00000480362 A0A087WWC5 75 aa12.91□□□□□ -0.34
UPF3A-206ENST00000480362 TRAV21A0A0B4J279 112 aa12.91□□□□□ -0.34
UPF3A-206ENST00000480362 C7orf71A4D174 169 aa12.91□□□□□ -0.34
UPF3A-206ENST00000480362 ZNF705GA8MUZ8 300 aaPredicted RBP12.91□□□□□ -0.34
UPF3A-206ENST00000480362 H7BYZ3 331 aa12.91□□□□□ -0.34
UPF3A-206ENST00000480362 SCO1O75880 301 aa12.91□□□□□ -0.34
UPF3A-206ENST00000480362 NUTF2P61970 127 aaKnown RBP12.91□□□□□ -0.34
UPF3A-206ENST00000480362 GFI1BQ5VTD9 330 aa12.91□□□□□ -0.34
UPF3A-206ENST00000480362 Q6AWC8 147 aa12.91□□□□□ -0.34
UPF3A-206ENST00000480362 V9GYV3 84 aa12.91□□□□□ -0.34
UPF3A-206ENST00000480362 TRAV12-3A0A0B4J271 114 aa12.9□□□□□ -0.34
UPF3A-206ENST00000480362 CRXO43186 299 aaPredicted RBP12.9□□□□□ -0.34
UPF3A-206ENST00000480362 RPP21Q9H633 154 aaKnown RBP12.9□□□□□ -0.34
UPF3A-206ENST00000480362 AMBPP02760 352 aa12.89□□□□□ -0.35
UPF3A-206ENST00000480362 ORM1P02763 201 aa12.89□□□□□ -0.35
UPF3A-206ENST00000480362 OR2D3Q8NGH3 330 aa12.89□□□□□ -0.35
UPF3A-206ENST00000480362 TMEM242Q9NWH2 141 aa12.89□□□□□ -0.35
UPF3A-206ENST00000480362 C11orf21Q9P2W6 132 aa12.89□□□□□ -0.35
UPF3A-206ENST00000480362 ANK2Q01484 3957 aa12.89□□□□□ -0.35
UPF3A-206ENST00000480362 TMEM189A5PLL7 270 aa12.88□□□□□ -0.35
UPF3A-206ENST00000480362 ZNF324O75467 553 aaPredicted RBP12.88□□□□□ -0.35
UPF3A-206ENST00000480362 RPL19P84098 196 aaKnown RBP12.88□□□□□ -0.35
UPF3A-206ENST00000480362 MORN3Q6PF18 240 aaPredicted RBP12.88□□□□□ -0.35
UPF3A-206ENST00000480362 TUBA4BQ9H853 241 aa12.88□□□□□ -0.35
UPF3A-206ENST00000480362 XCL2Q9UBD3 114 aa12.88□□□□□ -0.35
UPF3A-206ENST00000480362 CMYA5Q8N3K9 4069 aa12.87□□□□□ -0.35
UPF3A-206ENST00000480362 TMSB15BA0A087X1C1 80 aa12.87□□□□□ -0.35
UPF3A-206ENST00000480362 CA1P00915 261 aaPredicted RBP12.87□□□□□ -0.35
UPF3A-206ENST00000480362 LOC102724200A0A096LPH7 203 aaPredicted RBP12.86□□□□□ -0.35
UPF3A-206ENST00000480362 IGKV3D-20A0A0C4DH25 116 aa12.86□□□□□ -0.35
UPF3A-206ENST00000480362 GIG44P09565 113 aaPredicted RBP12.86□□□□□ -0.35
UPF3A-206ENST00000480362 LINC01559Q495D7 138 aa12.86□□□□□ -0.35
UPF3A-206ENST00000480362 CT83Q5H943 113 aa12.86□□□□□ -0.35
UPF3A-206ENST00000480362 MUC21Q5SSG8 566 aa12.86□□□□□ -0.35
UPF3A-206ENST00000480362 TMEM88Q6PEY1 159 aa12.86□□□□□ -0.35
UPF3A-206ENST00000480362 IL36BQ9NZH7 164 aa12.86□□□□□ -0.35
UPF3A-206ENST00000480362 NAGKQ9UJ70 344 aa12.86□□□□□ -0.35
UPF3A-206ENST00000480362 A8MWL6 223 aa12.85□□□□□ -0.35
UPF3A-206ENST00000480362 INSP01308 110 aa12.85□□□□□ -0.35
UPF3A-206ENST00000480362 RBMY1A1P0DJD3 496 aaKnown RBP12.85□□□□□ -0.35
UPF3A-206ENST00000480362 RBMY1CP0DJD4 496 aa12.85□□□□□ -0.35
UPF3A-206ENST00000480362 IGHV4-30-4P0DP06 118 aa12.85□□□□□ -0.35
UPF3A-206ENST00000480362 RBMY1FQ15415 496 aaKnown RBP12.85□□□□□ -0.35
UPF3A-206ENST00000480362 CBLN2Q8IUK8 224 aa12.85□□□□□ -0.35
UPF3A-206ENST00000480362 CSTL1Q9H114 145 aa12.85□□□□□ -0.35
UPF3A-206ENST00000480362 SMCO4Q9NRQ5 59 aa12.85□□□□□ -0.35
UPF3A-206ENST00000480362 DNHD1Q96M86 4753 aa12.84□□□□□ -0.35
UPF3A-206ENST00000480362 CXorf65A6NEN9 183 aa12.84□□□□□ -0.35
UPF3A-206ENST00000480362 GZMBP10144 247 aa12.84□□□□□ -0.35
UPF3A-206ENST00000480362 RPS20P60866 119 aaKnown RBP12.84□□□□□ -0.35
UPF3A-206ENST00000480362 ANXA2RQ3ZCQ2 193 aa12.84□□□□□ -0.35
UPF3A-206ENST00000480362 ZNF575Q86XF7 245 aa12.84□□□□□ -0.35
UPF3A-206ENST00000480362 TSKUQ8WUA8 353 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms