RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 LYPD6BQ8NI32 183 aa14.19□□□□□ -0.14
LIME1-205ENST00000480139 TVP23CQ96ET8 276 aa14.19□□□□□ -0.14
LIME1-205ENST00000480139 TREM1Q9NP99 234 aa14.19□□□□□ -0.14
LIME1-205ENST00000480139 KLF12Q9Y4X4 402 aa14.19□□□□□ -0.14
LIME1-205ENST00000480139 ZNF705GA8MUZ8 300 aaPredicted RBP14.18□□□□□ -0.14
LIME1-205ENST00000480139 C11orf94C9JXX5 98 aa14.18□□□□□ -0.14
LIME1-205ENST00000480139 TAGLN2P37802 199 aaKnown RBP14.18□□□□□ -0.14
LIME1-205ENST00000480139 Q6AWC8 147 aa14.18□□□□□ -0.14
LIME1-205ENST00000480139 ZNF493Q6ZR52 646 aa14.18□□□□□ -0.14
LIME1-205ENST00000480139 TRBV6-1A0A0K0K1D8 114 aa14.17□□□□□ -0.14
LIME1-205ENST00000480139 SAPCD1Q5SSQ6 148 aa14.17□□□□□ -0.14
LIME1-205ENST00000480139 TEX261Q6UWH6 196 aa14.17□□□□□ -0.14
LIME1-205ENST00000480139 TMEM263Q8WUH6 116 aaKnown RBP14.17□□□□□ -0.14
LIME1-205ENST00000480139 C16orf74Q96GX8 76 aa14.17□□□□□ -0.14
LIME1-205ENST00000480139 FMC1Q96HJ9 113 aa14.17□□□□□ -0.14
LIME1-205ENST00000480139 SGK494Q96LW2 274 aa14.17□□□□□ -0.14
LIME1-205ENST00000480139 LINC00479Q96M42 142 aa14.17□□□□□ -0.14
LIME1-205ENST00000480139 DNAH7Q8WXX0 4024 aa14.16□□□□□ -0.14
LIME1-205ENST00000480139 TEX48A0A1B0GUV7 120 aa14.16□□□□□ -0.14
LIME1-205ENST00000480139 C3orf84H3BNL1 204 aa14.16□□□□□ -0.14
LIME1-205ENST00000480139 PRNTQ86SH4 94 aa14.16□□□□□ -0.14
LIME1-205ENST00000480139 Q86TA4 180 aa14.16□□□□□ -0.14
LIME1-205ENST00000480139 C11orf45Q8TAV5 145 aa14.16□□□□□ -0.14
LIME1-205ENST00000480139 RNASE8Q8TDE3 154 aaKnown RBP14.16□□□□□ -0.14
LIME1-205ENST00000480139 TRAV34A0A0B4J273 112 aa14.15□□□□□ -0.14
LIME1-205ENST00000480139 S100A9P06702 114 aaKnown RBP14.15□□□□□ -0.14
LIME1-205ENST00000480139 BCL2P10415 239 aa14.15□□□□□ -0.14
LIME1-205ENST00000480139 AZU1P20160 251 aa14.15□□□□□ -0.14
LIME1-205ENST00000480139 MEF2BQ02080 365 aaPredicted RBP14.15□□□□□ -0.14
LIME1-205ENST00000480139 TMEM183BQ1AE95 376 aa14.15□□□□□ -0.14
LIME1-205ENST00000480139 C2CD4CQ8TF44 421 aa14.15□□□□□ -0.14
LIME1-205ENST00000480139 PLAC8L1A1L4L8 177 aa14.14□□□□□ -0.15
LIME1-205ENST00000480139 PRM2P04554 102 aa14.14□□□□□ -0.15
LIME1-205ENST00000480139 AKR1C3P42330 323 aa14.14□□□□□ -0.15
LIME1-205ENST00000480139 UBE2G1P62253 170 aa14.14□□□□□ -0.15
LIME1-205ENST00000480139 ANXA2RQ3ZCQ2 193 aa14.14□□□□□ -0.15
LIME1-205ENST00000480139 EIF4E3Q8N5X7 224 aaKnown RBP14.14□□□□□ -0.15
LIME1-205ENST00000480139 ZNF680Q8NEM1 530 aa14.14□□□□□ -0.15
LIME1-205ENST00000480139 C11orf52Q96A22 123 aa14.14□□□□□ -0.15
LIME1-205ENST00000480139 ZFP30Q9Y2G7 519 aa14.14□□□□□ -0.15
LIME1-205ENST00000480139 IGHV1OR15-1A0A075B7D0 117 aa14.13□□□□□ -0.15
LIME1-205ENST00000480139 TRAV21A0A0B4J279 112 aa14.13□□□□□ -0.15
LIME1-205ENST00000480139 SCO2A0A1W2PP80 73 aa14.13□□□□□ -0.15
LIME1-205ENST00000480139 CXorf65A6NEN9 183 aa14.13□□□□□ -0.15
LIME1-205ENST00000480139 PDE6DO43924 150 aa14.13□□□□□ -0.15
LIME1-205ENST00000480139 SPART-AS1P0CW21 52 aa14.13□□□□□ -0.15
LIME1-205ENST00000480139 HTN1P15515 57 aa14.13□□□□□ -0.15
LIME1-205ENST00000480139 SMUG1Q53HV7 270 aa14.13□□□□□ -0.15
LIME1-205ENST00000480139 COX8CQ7Z4L0 72 aa14.13□□□□□ -0.15
LIME1-205ENST00000480139 DKK2Q9UBU2 259 aa14.13□□□□□ -0.15
LIME1-205ENST00000480139 VAX2Q9UIW0 290 aa14.13□□□□□ -0.15
LIME1-205ENST00000480139 CELA1Q9UNI1 258 aa14.13□□□□□ -0.15
LIME1-205ENST00000480139 LYRM9A8MSI8 78 aa14.12□□□□□ -0.15
LIME1-205ENST00000480139 RGS13O14921 159 aa14.12□□□□□ -0.15
LIME1-205ENST00000480139 LTAP01374 205 aa14.12□□□□□ -0.15
LIME1-205ENST00000480139 EMP1P54849 157 aa14.12□□□□□ -0.15
LIME1-205ENST00000480139 Q6ZQT7 251 aa14.12□□□□□ -0.15
LIME1-205ENST00000480139 C8orf49Q96NF6 230 aa14.12□□□□□ -0.15
LIME1-205ENST00000480139 GCGP01275 180 aa14.11□□□□□ -0.15
LIME1-205ENST00000480139 PFN1P07737 140 aaKnown RBP14.11□□□□□ -0.15
LIME1-205ENST00000480139 NANOS2P60321 138 aaKnown RBP14.11□□□□□ -0.15
LIME1-205ENST00000480139 TDRG1Q3Y452 100 aa14.11□□□□□ -0.15
LIME1-205ENST00000480139 FAM222AQ5U5X8 452 aa14.11□□□□□ -0.15
LIME1-205ENST00000480139 CBY3A6NI87 242 aa14.1□□□□□ -0.15
LIME1-205ENST00000480139 IBA57Q5T440 356 aaKnown RBP14.1□□□□□ -0.15
LIME1-205ENST00000480139 FAM159AQ6UWV7 190 aa14.1□□□□□ -0.15
LIME1-205ENST00000480139 TIMM8BQ9Y5J9 83 aaPredicted RBP14.1□□□□□ -0.15
LIME1-205ENST00000480139 ZNF80P51504 273 aaPredicted RBP14.09□□□□□ -0.15
LIME1-205ENST00000480139 C12orf74Q32Q52 190 aa14.09□□□□□ -0.15
LIME1-205ENST00000480139 CASC10Q5T4H9 136 aa14.09□□□□□ -0.15
LIME1-205ENST00000480139 C11orf72Q8NBR9 251 aa14.09□□□□□ -0.15
LIME1-205ENST00000480139 SNURFLB1AK76 121 aa14.08□□□□□ -0.16
LIME1-205ENST00000480139 DAZ2Q13117 558 aaKnown RBP14.08□□□□□ -0.16
LIME1-205ENST00000480139 TMEM183AQ8IXX5 376 aa14.08□□□□□ -0.16
LIME1-205ENST00000480139 KCNS1Q96KK3 526 aa14.08□□□□□ -0.16
LIME1-205ENST00000480139 CSMD3Q7Z407 3707 aa14.08□□□□□ -0.16
LIME1-205ENST00000480139 NUPR2A6NF83 97 aa14.07□□□□□ -0.16
LIME1-205ENST00000480139 RBFOX3A6NFN3 312 aa14.07□□□□□ -0.16
LIME1-205ENST00000480139 NDUFS6O75380 124 aaKnown RBP14.07□□□□□ -0.16
LIME1-205ENST00000480139 RPL35P42766 123 aaKnown RBP14.07□□□□□ -0.16
LIME1-205ENST00000480139 ZNF506Q5JVG8 444 aa14.07□□□□□ -0.16
LIME1-205ENST00000480139 MUC21Q5SSG8 566 aa14.07□□□□□ -0.16
LIME1-205ENST00000480139 TRGV11A0A075B6L2 103 aa14.06□□□□□ -0.16
LIME1-205ENST00000480139 TCL1AP56279 114 aa14.06□□□□□ -0.16
LIME1-205ENST00000480139 ZFAND6Q6FIF0 208 aa14.06□□□□□ -0.16
LIME1-205ENST00000480139 Q6ZTC4 211 aa14.06□□□□□ -0.16
LIME1-205ENST00000480139 PHLDA1Q8WV24 401 aaPredicted RBP14.06□□□□□ -0.16
LIME1-205ENST00000480139 ZC2HC1AQ96GY0 325 aa14.06□□□□□ -0.16
LIME1-205ENST00000480139 MLST8Q9BVC4 326 aa14.06□□□□□ -0.16
LIME1-205ENST00000480139 TP53TG3Q9ULZ0 132 aa14.06□□□□□ -0.16
LIME1-205ENST00000480139 FABP5P3A8MUU1 101 aa14.05□□□□□ -0.16
LIME1-205ENST00000480139 ZNF415Q09FC8 603 aa14.05□□□□□ -0.16
LIME1-205ENST00000480139 LINC00612Q8N6U2 182 aa14.05□□□□□ -0.16
LIME1-205ENST00000480139 FAM210AQ96ND0 272 aa14.05□□□□□ -0.16
LIME1-205ENST00000480139 DERL1Q9BUN8 251 aa14.05□□□□□ -0.16
LIME1-205ENST00000480139 SDF2L1Q9HCN8 221 aa14.05□□□□□ -0.16
LIME1-205ENST00000480139 NOP10Q9NPE3 64 aaKnown RBP14.05□□□□□ -0.16
LIME1-205ENST00000480139 GSN-AS1Q9NRJ2 163 aa14.05□□□□□ -0.16
LIME1-205ENST00000480139 NAGKQ9UJ70 344 aa14.05□□□□□ -0.16
LIME1-205ENST00000480139 TMEM250H0YL14 139 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms