RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 LRRC20Q8TCA0 184 aa3.5□□□□□ -1.85
PTCD3-213ENST00000480102 C2CD4CQ8TF44 421 aa3.5□□□□□ -1.85
PTCD3-213ENST00000480102 TMEM263Q8WUH6 116 aaKnown RBP3.5□□□□□ -1.85
PTCD3-213ENST00000480102 C16orf74Q96GX8 76 aa3.5□□□□□ -1.85
PTCD3-213ENST00000480102 LINC00052Q96N35 136 aa3.5□□□□□ -1.85
PTCD3-213ENST00000480102 SLC25A2Q9BXI2 301 aa3.5□□□□□ -1.85
PTCD3-213ENST00000480102 RETNQ9HD89 108 aa3.5□□□□□ -1.85
PTCD3-213ENST00000480102 TMEM167BQ9NRX6 74 aa3.5□□□□□ -1.85
PTCD3-213ENST00000480102 ZNF586Q9NXT0 402 aa3.5□□□□□ -1.85
PTCD3-213ENST00000480102 RYR2Q92736 4967 aa3.5□□□□□ -1.85
PTCD3-213ENST00000480102 ALMS1Q8TCU4 4167 aa3.49□□□□□ -1.85
PTCD3-213ENST00000480102 A0A0D9SG52 128 aa3.49□□□□□ -1.85
PTCD3-213ENST00000480102 A0A1W2PRE2 83 aa3.49□□□□□ -1.85
PTCD3-213ENST00000480102 A4D1N5 150 aa3.49□□□□□ -1.85
PTCD3-213ENST00000480102 CXorf65A6NEN9 183 aa3.49□□□□□ -1.85
PTCD3-213ENST00000480102 UMAD1C9J7I0 102 aa3.49□□□□□ -1.85
PTCD3-213ENST00000480102 SLC17A3O00476 420 aa3.49□□□□□ -1.85
PTCD3-213ENST00000480102 PAGE4O60829 102 aa3.49□□□□□ -1.85
PTCD3-213ENST00000480102 ZNF324O75467 553 aaPredicted RBP3.49□□□□□ -1.85
PTCD3-213ENST00000480102 FHITP49789 147 aa3.49□□□□□ -1.85
PTCD3-213ENST00000480102 EIF5AP63241 154 aaKnown RBP3.49□□□□□ -1.85
PTCD3-213ENST00000480102 LGALS9BQ3B8N2 356 aa3.49□□□□□ -1.85
PTCD3-213ENST00000480102 LGALSLQ3ZCW2 172 aaPredicted RBP3.49□□□□□ -1.85
PTCD3-213ENST00000480102 PIK3CD-AS1Q5SR53 167 aa3.49□□□□□ -1.85
PTCD3-213ENST00000480102 IBA57Q5T440 356 aaKnown RBP3.49□□□□□ -1.85
PTCD3-213ENST00000480102 Q6AWC8 147 aa3.49□□□□□ -1.85
PTCD3-213ENST00000480102 RPP25LQ8N5L8 163 aaKnown RBP3.49□□□□□ -1.85
PTCD3-213ENST00000480102 OR4B1Q8NGF8 309 aa3.49□□□□□ -1.85
PTCD3-213ENST00000480102 RNASE8Q8TDE3 154 aaKnown RBP3.49□□□□□ -1.85
PTCD3-213ENST00000480102 PHLDA1Q8WV24 401 aaPredicted RBP3.49□□□□□ -1.85
PTCD3-213ENST00000480102 ST6GAL2Q96JF0 529 aa3.49□□□□□ -1.85
PTCD3-213ENST00000480102 PAXXQ9BUH6 204 aa3.49□□□□□ -1.85
PTCD3-213ENST00000480102 SLC35B3Q9H1N7 401 aa3.49□□□□□ -1.85
PTCD3-213ENST00000480102 OTORQ9NRC9 128 aa3.49□□□□□ -1.85
PTCD3-213ENST00000480102 ZNF492Q9P255 531 aa3.49□□□□□ -1.85
PTCD3-213ENST00000480102 XCL2Q9UBD3 114 aa3.49□□□□□ -1.85
PTCD3-213ENST00000480102 DNAH2Q9P225 4427 aa3.49□□□□□ -1.85
PTCD3-213ENST00000480102 BORCS7-ASMTA0A0B4J1R7 106 aa3.48□□□□□ -1.85
PTCD3-213ENST00000480102 PLAC8L1A1L4L8 177 aa3.48□□□□□ -1.85
PTCD3-213ENST00000480102 F6UB75 175 aa3.48□□□□□ -1.85
PTCD3-213ENST00000480102 CIDEAO60543 219 aa3.48□□□□□ -1.85
PTCD3-213ENST00000480102 SEC11BP0C7V7 166 aa3.48□□□□□ -1.85
PTCD3-213ENST00000480102 CT45A10P0DMU9 189 aa3.48□□□□□ -1.85
PTCD3-213ENST00000480102 ATP6V0CP27449 155 aa3.48□□□□□ -1.85
PTCD3-213ENST00000480102 HLA-DMBP28068 263 aa3.48□□□□□ -1.85
PTCD3-213ENST00000480102 CSN1S1P47710 185 aa3.48□□□□□ -1.85
PTCD3-213ENST00000480102 RAB5CP51148 216 aa3.48□□□□□ -1.85
PTCD3-213ENST00000480102 ZNF138P52744 262 aa3.48□□□□□ -1.85
PTCD3-213ENST00000480102 HIST1H1AQ02539 215 aaPredicted RBP3.48□□□□□ -1.85
PTCD3-213ENST00000480102 C12orf74Q32Q52 190 aa3.48□□□□□ -1.85
PTCD3-213ENST00000480102 GCSAMLQ5JQS6 135 aa3.48□□□□□ -1.85
PTCD3-213ENST00000480102 FFAR4Q5NUL3 377 aa3.48□□□□□ -1.85
PTCD3-213ENST00000480102 TMEM78Q5T7P6 136 aa3.48□□□□□ -1.85
PTCD3-213ENST00000480102 MIR17HGQ75NE6 70 aa3.48□□□□□ -1.85
PTCD3-213ENST00000480102 TCTE3Q8IZS6 198 aa3.48□□□□□ -1.85
PTCD3-213ENST00000480102 KCNRGQ8N5I3 272 aa3.48□□□□□ -1.85
PTCD3-213ENST00000480102 ZFAND2AQ8N6M9 145 aa3.48□□□□□ -1.85
PTCD3-213ENST00000480102 Q8N9P0 234 aaPredicted RBP3.48□□□□□ -1.85
PTCD3-213ENST00000480102 C15orf53Q8NAA6 179 aa3.48□□□□□ -1.85
PTCD3-213ENST00000480102 C5orf17Q8NAS9 161 aa3.48□□□□□ -1.85
PTCD3-213ENST00000480102 OR10G4Q8NGN3 311 aa3.48□□□□□ -1.85
PTCD3-213ENST00000480102 OR10G9Q8NGN4 311 aa3.48□□□□□ -1.85
PTCD3-213ENST00000480102 OR10G7Q8NGN6 311 aa3.48□□□□□ -1.85
PTCD3-213ENST00000480102 STOML3Q8TAV4 291 aa3.48□□□□□ -1.85
PTCD3-213ENST00000480102 NIPSNAP3BQ9BS92 247 aa3.48□□□□□ -1.85
PTCD3-213ENST00000480102 TM2D2Q9BX73 214 aa3.48□□□□□ -1.85
PTCD3-213ENST00000480102 WFDC1Q9HC57 220 aa3.48□□□□□ -1.85
PTCD3-213ENST00000480102 TIMM8BQ9Y5J9 83 aaPredicted RBP3.48□□□□□ -1.85
PTCD3-213ENST00000480102 SELENOKQ9Y6D0 94 aa3.48□□□□□ -1.85
PTCD3-213ENST00000480102 TRAV1-1A0A0B4J248 108 aa3.47□□□□□ -1.85
PTCD3-213ENST00000480102 TRAV5A0A0B4J249 113 aa3.47□□□□□ -1.85
PTCD3-213ENST00000480102 TRBV6-1A0A0K0K1D8 114 aa3.47□□□□□ -1.85
PTCD3-213ENST00000480102 CTXND1A0A1B0GTU2 59 aa3.47□□□□□ -1.85
PTCD3-213ENST00000480102 A0A1W2PPV4 95 aa3.47□□□□□ -1.85
PTCD3-213ENST00000480102 C7orf71A4D174 169 aa3.47□□□□□ -1.85
PTCD3-213ENST00000480102 CBY3A6NI87 242 aa3.47□□□□□ -1.85
PTCD3-213ENST00000480102 OR7C2O60412 319 aa3.47□□□□□ -1.85
PTCD3-213ENST00000480102 NDUFS6O75380 124 aaKnown RBP3.47□□□□□ -1.85
PTCD3-213ENST00000480102 CXorf1O96002 111 aa3.47□□□□□ -1.85
PTCD3-213ENST00000480102 CDC34P49427 236 aaPredicted RBP3.47□□□□□ -1.85
PTCD3-213ENST00000480102 CAMPP49913 170 aa3.47□□□□□ -1.85
PTCD3-213ENST00000480102 PPT1P50897 306 aa3.47□□□□□ -1.85
PTCD3-213ENST00000480102 UBE2L3P68036 154 aaKnown RBP3.47□□□□□ -1.85
PTCD3-213ENST00000480102 SLAQ13239 276 aa3.47□□□□□ -1.85
PTCD3-213ENST00000480102 SPINK13Q1W4C9 94 aa3.47□□□□□ -1.85
PTCD3-213ENST00000480102 RNF212Q495C1 297 aa3.47□□□□□ -1.85
PTCD3-213ENST00000480102 Q5BKY6 102 aa3.47□□□□□ -1.85
PTCD3-213ENST00000480102 GFI1BQ5VTD9 330 aa3.47□□□□□ -1.85
PTCD3-213ENST00000480102 EIF5AL1Q6IS14 154 aaKnown RBP3.47□□□□□ -1.85
PTCD3-213ENST00000480102 RNF182Q8N6D2 247 aa3.47□□□□□ -1.85
PTCD3-213ENST00000480102 HIST1H2BAQ96A08 127 aa3.47□□□□□ -1.85
PTCD3-213ENST00000480102 PTH2Q96A98 100 aa3.47□□□□□ -1.85
PTCD3-213ENST00000480102 TXNDC17Q9BRA2 123 aa3.47□□□□□ -1.85
PTCD3-213ENST00000480102 ACTR3CQ9C0K3 210 aaPredicted RBP3.47□□□□□ -1.85
PTCD3-213ENST00000480102 AGPAT4-IT1Q9H0P7 198 aa3.47□□□□□ -1.85
PTCD3-213ENST00000480102 CYTL1Q9NRR1 136 aa3.47□□□□□ -1.85
PTCD3-213ENST00000480102 APLNQ9ULZ1 77 aa3.47□□□□□ -1.85
PTCD3-213ENST00000480102 KLF12Q9Y4X4 402 aa3.47□□□□□ -1.85
PTCD3-213ENST00000480102 YTHDF2Q9Y5A9 579 aaKnown RBP3.47□□□□□ -1.85
PTCD3-213ENST00000480102 TENM2Q9NT68 2774 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms