RNA–Protein interactions for RNA: ENST00000477836.1

SMARCB1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2

Gene SMARCB1, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-206ENST00000477836 NDUFS6O75380 124 aaKnown RBP6.88□□□□□ -1.31
SMARCB1-206ENST00000477836 NDUFB4O95168 129 aa6.88□□□□□ -1.31
SMARCB1-206ENST00000477836 DEFB131AP59861 70 aa6.88□□□□□ -1.31
SMARCB1-206ENST00000477836 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.88□□□□□ -1.31
SMARCB1-206ENST00000477836 CYB561D1Q8N8Q1 229 aa6.88□□□□□ -1.31
SMARCB1-206ENST00000477836 C5orf17Q8NAS9 161 aa6.88□□□□□ -1.31
SMARCB1-206ENST00000477836 CMTM2Q8TAZ6 248 aa6.88□□□□□ -1.31
SMARCB1-206ENST00000477836 FAM210BQ96KR6 192 aa6.88□□□□□ -1.31
SMARCB1-206ENST00000477836 SLC35B3Q9H1N7 401 aa6.88□□□□□ -1.31
SMARCB1-206ENST00000477836 SCO2A0A1W2PP80 73 aa6.87□□□□□ -1.31
SMARCB1-206ENST00000477836 TMEM218A2RU14 115 aa6.87□□□□□ -1.31
SMARCB1-206ENST00000477836 KRBOX1C9JBD0 128 aa6.87□□□□□ -1.31
SMARCB1-206ENST00000477836 C9JQL5 133 aa6.87□□□□□ -1.31
SMARCB1-206ENST00000477836 PEX7O00628 323 aa6.87□□□□□ -1.31
SMARCB1-206ENST00000477836 SMR3BP02814 79 aaPredicted RBP6.87□□□□□ -1.31
SMARCB1-206ENST00000477836 SLC25A5P05141 298 aaKnown RBP6.87□□□□□ -1.31
SMARCB1-206ENST00000477836 SRP19P09132 144 aaKnown RBP6.87□□□□□ -1.31
SMARCB1-206ENST00000477836 FAM3BP58499 235 aaPredicted RBP6.87□□□□□ -1.31
SMARCB1-206ENST00000477836 SUMO1P63165 101 aaKnown RBP6.87□□□□□ -1.31
SMARCB1-206ENST00000477836 MORN3Q6PF18 240 aaPredicted RBP6.87□□□□□ -1.31
SMARCB1-206ENST00000477836 EXOC3-AS1Q8N2X6 119 aa6.87□□□□□ -1.31
SMARCB1-206ENST00000477836 C11orf52Q96A22 123 aa6.87□□□□□ -1.31
SMARCB1-206ENST00000477836 RPUSD4Q96CM3 377 aaKnown RBP6.87□□□□□ -1.31
SMARCB1-206ENST00000477836 C16orf92Q96LL3 132 aa6.87□□□□□ -1.31
SMARCB1-206ENST00000477836 C17orf77Q96MU5 243 aa6.87□□□□□ -1.31
SMARCB1-206ENST00000477836 ATG101Q9BSB4 218 aa6.87□□□□□ -1.31
SMARCB1-206ENST00000477836 ZNF331Q9NQX6 463 aaPredicted RBP6.87□□□□□ -1.31
SMARCB1-206ENST00000477836 RPH3ALQ9UNE2 315 aa6.87□□□□□ -1.31
SMARCB1-206ENST00000477836 PGPA6NDG6 321 aa6.86□□□□□ -1.31
SMARCB1-206ENST00000477836 F8W036 122 aa6.86□□□□□ -1.31
SMARCB1-206ENST00000477836 HTN3P15516 51 aa6.86□□□□□ -1.31
SMARCB1-206ENST00000477836 AKR1C3P42330 323 aa6.86□□□□□ -1.31
SMARCB1-206ENST00000477836 CSN1S1P47710 185 aa6.86□□□□□ -1.31
SMARCB1-206ENST00000477836 GNG5P63218 68 aa6.86□□□□□ -1.31
SMARCB1-206ENST00000477836 PAFAH1B2P68402 229 aa6.86□□□□□ -1.31
SMARCB1-206ENST00000477836 FAM90A2PQ658T7 463 aa6.86□□□□□ -1.31
SMARCB1-206ENST00000477836 CCDC28AQ8IWP9 274 aa6.86□□□□□ -1.31
SMARCB1-206ENST00000477836 HIST1H2BAQ96A08 127 aa6.86□□□□□ -1.31
SMARCB1-206ENST00000477836 PARLQ9H300 379 aa6.86□□□□□ -1.31
SMARCB1-206ENST00000477836 PRELID1Q9Y255 219 aa6.86□□□□□ -1.31
SMARCB1-206ENST00000477836 K7EQM0 130 aa6.85□□□□□ -1.31
SMARCB1-206ENST00000477836 DNASE2O00115 360 aaPredicted RBP6.85□□□□□ -1.31
SMARCB1-206ENST00000477836 ISLRO14498 428 aa6.85□□□□□ -1.31
SMARCB1-206ENST00000477836 SOCS3O14543 225 aa6.85□□□□□ -1.31
SMARCB1-206ENST00000477836 TCRAP04437 139 aa6.85□□□□□ -1.31
SMARCB1-206ENST00000477836 SPART-AS1P0CW21 52 aa6.85□□□□□ -1.31
SMARCB1-206ENST00000477836 ADCYAP1P18509 176 aa6.85□□□□□ -1.31
SMARCB1-206ENST00000477836 CNN1P51911 297 aaKnown RBP6.85□□□□□ -1.31
SMARCB1-206ENST00000477836 ZNF674Q2M3X9 581 aa6.85□□□□□ -1.31
SMARCB1-206ENST00000477836 TRPT1Q86TN4 253 aaKnown RBP6.85□□□□□ -1.31
SMARCB1-206ENST00000477836 FAM24BQ8N5W8 94 aa6.85□□□□□ -1.31
SMARCB1-206ENST00000477836 RNF182Q8N6D2 247 aa6.85□□□□□ -1.31
SMARCB1-206ENST00000477836 CSNK1G2-AS1Q8NCQ2 148 aa6.85□□□□□ -1.31
SMARCB1-206ENST00000477836 ZNRF2Q8NHG8 242 aa6.85□□□□□ -1.31
SMARCB1-206ENST00000477836 MRPL53Q96EL3 112 aaKnown RBP6.85□□□□□ -1.31
SMARCB1-206ENST00000477836 SMIM7Q9BQ49 75 aa6.85□□□□□ -1.31
SMARCB1-206ENST00000477836 MS4A6AQ9H2W1 248 aa6.85□□□□□ -1.31
SMARCB1-206ENST00000477836 EPDR1Q9UM22 224 aa6.85□□□□□ -1.31
SMARCB1-206ENST00000477836 PLA2G2DQ9UNK4 145 aa6.85□□□□□ -1.31
SMARCB1-206ENST00000477836 TRAV2A0A0B4J234 112 aa6.84□□□□□ -1.31
SMARCB1-206ENST00000477836 TRAV8-2A0A0B4J237 113 aa6.84□□□□□ -1.31
SMARCB1-206ENST00000477836 SERTM2A0A1B0GWG4 89 aa6.84□□□□□ -1.31
SMARCB1-206ENST00000477836 ZNF727A8MUV8 499 aa6.84□□□□□ -1.31
SMARCB1-206ENST00000477836 FAM229AH3BQW9 127 aa6.84□□□□□ -1.31
SMARCB1-206ENST00000477836 M0R3E3 92 aa6.84□□□□□ -1.31
SMARCB1-206ENST00000477836 S100A1P23297 94 aa6.84□□□□□ -1.31
SMARCB1-206ENST00000477836 ID1P41134 155 aa6.84□□□□□ -1.31
SMARCB1-206ENST00000477836 EMP1P54849 157 aa6.84□□□□□ -1.31
SMARCB1-206ENST00000477836 UBE2G1P62253 170 aa6.84□□□□□ -1.31
SMARCB1-206ENST00000477836 SNRPD3P62318 126 aaKnown RBP6.84□□□□□ -1.31
SMARCB1-206ENST00000477836 IGFL4Q6B9Z1 124 aa6.84□□□□□ -1.31
SMARCB1-206ENST00000477836 TMEM88Q6PEY1 159 aa6.84□□□□□ -1.31
SMARCB1-206ENST00000477836 GOLT1AQ6ZVE7 132 aa6.84□□□□□ -1.31
SMARCB1-206ENST00000477836 ZNF738Q8NE65 137 aa6.84□□□□□ -1.31
SMARCB1-206ENST00000477836 LINC00052Q96N35 136 aa6.84□□□□□ -1.31
SMARCB1-206ENST00000477836 DERL1Q9BUN8 251 aa6.84□□□□□ -1.31
SMARCB1-206ENST00000477836 SEC11CQ9BY50 192 aa6.84□□□□□ -1.31
SMARCB1-206ENST00000477836 LRP1Q07954 4544 aaKnown RBP6.84□□□□□ -1.31
SMARCB1-206ENST00000477836 FUSP35637 526 aaKnown RBP eCLIP6.83□□□□□ -1.32
SMARCB1-206ENST00000477836 RPL35P42766 123 aaKnown RBP6.83□□□□□ -1.32
SMARCB1-206ENST00000477836 FAM74A3Q4VXF1 159 aa6.83□□□□□ -1.32
SMARCB1-206ENST00000477836 CENPWQ5EE01 88 aa6.83□□□□□ -1.32
SMARCB1-206ENST00000477836 Q6ZSN1 163 aa6.83□□□□□ -1.32
SMARCB1-206ENST00000477836 Q86TA4 180 aa6.83□□□□□ -1.32
SMARCB1-206ENST00000477836 ARL6IP6Q8N6S5 226 aa6.83□□□□□ -1.32
SMARCB1-206ENST00000477836 DCANP1Q8TF63 244 aa6.83□□□□□ -1.32
SMARCB1-206ENST00000477836 FMC1Q96HJ9 113 aa6.83□□□□□ -1.32
SMARCB1-206ENST00000477836 NIPSNAP3BQ9BS92 247 aa6.83□□□□□ -1.32
SMARCB1-206ENST00000477836 CARHSP1Q9Y2V2 147 aaKnown RBP6.83□□□□□ -1.32
SMARCB1-206ENST00000477836 FAT3Q8TDW7 4589 aa6.82□□□□□ -1.32
SMARCB1-206ENST00000477836 IGKV2-40A0A087WW87 121 aaPredicted RBP6.82□□□□□ -1.32
SMARCB1-206ENST00000477836 KNCNA6PVL3 124 aa6.82□□□□□ -1.32
SMARCB1-206ENST00000477836 KRTAP29-1A8MX34 341 aaPredicted RBP6.82□□□□□ -1.32
SMARCB1-206ENST00000477836 C9JCJ5 164 aa6.82□□□□□ -1.32
SMARCB1-206ENST00000477836 DIRC3C9JPN6 131 aa6.82□□□□□ -1.32
SMARCB1-206ENST00000477836 K7EQG2 157 aa6.82□□□□□ -1.32
SMARCB1-206ENST00000477836 IGKV2D-40P01614 121 aaPredicted RBP6.82□□□□□ -1.32
SMARCB1-206ENST00000477836 S100A9P06702 114 aaKnown RBP6.82□□□□□ -1.32
SMARCB1-206ENST00000477836 ZNF688P0C7X2 276 aa6.82□□□□□ -1.32
SMARCB1-206ENST00000477836 BTF3P20290 206 aaKnown RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms