RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 MIFP14174 115 aa12.68□□□□□ -0.38
PTPN7-209ENST00000477554 AKR1C3P42330 323 aa12.68□□□□□ -0.38
PTPN7-209ENST00000477554 SPINK13Q1W4C9 94 aa12.68□□□□□ -0.38
PTPN7-209ENST00000477554 KIR3DS1Q14943 382 aa12.67□□□□□ -0.38
PTPN7-209ENST00000477554 Q6ZTC4 211 aa12.67□□□□□ -0.38
PTPN7-209ENST00000477554 OR8A1Q8NGG7 326 aa12.67□□□□□ -0.38
PTPN7-209ENST00000477554 C2CD4CQ8TF44 421 aa12.67□□□□□ -0.38
PTPN7-209ENST00000477554 CLUHP3Q96NS8 147 aa12.67□□□□□ -0.38
PTPN7-209ENST00000477554 TRAV12-2A0A075B6T6 113 aa12.66□□□□□ -0.38
PTPN7-209ENST00000477554 IGKV2-40A0A087WW87 121 aaPredicted RBP12.66□□□□□ -0.38
PTPN7-209ENST00000477554 NUPR2A6NF83 97 aa12.66□□□□□ -0.38
PTPN7-209ENST00000477554 DUSP14O95147 198 aaKnown RBP12.66□□□□□ -0.38
PTPN7-209ENST00000477554 IGKV2D-40P01614 121 aaPredicted RBP12.66□□□□□ -0.38
PTPN7-209ENST00000477554 NUTF2P61970 127 aaKnown RBP12.66□□□□□ -0.38
PTPN7-209ENST00000477554 UBE2G1P62253 170 aa12.66□□□□□ -0.38
PTPN7-209ENST00000477554 C9orf47Q6ZRZ4 202 aa12.66□□□□□ -0.38
PTPN7-209ENST00000477554 TMEM75Q8N9X5 138 aa12.66□□□□□ -0.38
PTPN7-209ENST00000477554 FMC1Q96HJ9 113 aa12.66□□□□□ -0.38
PTPN7-209ENST00000477554 CEBPGP53567 150 aa12.65□□□□□ -0.38
PTPN7-209ENST00000477554 EMP1P54849 157 aa12.65□□□□□ -0.38
PTPN7-209ENST00000477554 HIST1H1AQ02539 215 aaPredicted RBP12.65□□□□□ -0.38
PTPN7-209ENST00000477554 C12orf74Q32Q52 190 aa12.65□□□□□ -0.38
PTPN7-209ENST00000477554 TMEM78Q5T7P6 136 aa12.65□□□□□ -0.38
PTPN7-209ENST00000477554 LINC00476Q8WZB0 136 aa12.65□□□□□ -0.38
PTPN7-209ENST00000477554 LINC00477Q96M19 166 aa12.65□□□□□ -0.38
PTPN7-209ENST00000477554 C1QTNF4Q9BXJ3 329 aa12.65□□□□□ -0.38
PTPN7-209ENST00000477554 KLF12Q9Y4X4 402 aa12.65□□□□□ -0.38
PTPN7-209ENST00000477554 C9JQL5 133 aa12.64□□□□□ -0.39
PTPN7-209ENST00000477554 TAS2R60P59551 318 aa12.64□□□□□ -0.39
PTPN7-209ENST00000477554 TMEM183BQ1AE95 376 aa12.64□□□□□ -0.39
PTPN7-209ENST00000477554 NPIPB6E9PJ23 425 aa12.63□□□□□ -0.39
PTPN7-209ENST00000477554 RPL35P42766 123 aaKnown RBP12.63□□□□□ -0.39
PTPN7-209ENST00000477554 FLI1Q01543 452 aaPredicted RBP12.63□□□□□ -0.39
PTPN7-209ENST00000477554 LINC00479Q96M42 142 aa12.63□□□□□ -0.39
PTPN7-209ENST00000477554 VGLL1Q99990 258 aa12.63□□□□□ -0.39
PTPN7-209ENST00000477554 PARLQ9H300 379 aa12.63□□□□□ -0.39
PTPN7-209ENST00000477554 PPP1R14DQ9NXH3 145 aa12.63□□□□□ -0.39
PTPN7-209ENST00000477554 TRAV8-1A0A0A6YYK1 113 aa12.62□□□□□ -0.39
PTPN7-209ENST00000477554 TRAV34A0A0B4J273 112 aa12.62□□□□□ -0.39
PTPN7-209ENST00000477554 TRBV6-1A0A0K0K1D8 114 aa12.62□□□□□ -0.39
PTPN7-209ENST00000477554 SFTA3P0C7M3 94 aa12.62□□□□□ -0.39
PTPN7-209ENST00000477554 ERCC8Q13216 396 aa12.62□□□□□ -0.39
PTPN7-209ENST00000477554 FAM74A3Q4VXF1 159 aa12.62□□□□□ -0.39
PTPN7-209ENST00000477554 SOHLH1Q5JUK2 328 aa12.62□□□□□ -0.39
PTPN7-209ENST00000477554 SLC7A5P1Q8MH63 180 aa12.62□□□□□ -0.39
PTPN7-209ENST00000477554 AGPAT4-IT1Q9H0P7 198 aa12.62□□□□□ -0.39
PTPN7-209ENST00000477554 PSG8Q9UQ74 426 aa12.62□□□□□ -0.39
PTPN7-209ENST00000477554 FRAS1Q86XX4 4008 aa12.62□□□□□ -0.39
PTPN7-209ENST00000477554 TMEM218A2RU14 115 aa12.62□□□□□ -0.39
PTPN7-209ENST00000477554 ZNF705GA8MUZ8 300 aaPredicted RBP12.62□□□□□ -0.39
PTPN7-209ENST00000477554 LY6G6CO95867 125 aa12.62□□□□□ -0.39
PTPN7-209ENST00000477554 IGLV2-11P01706 119 aa12.62□□□□□ -0.39
PTPN7-209ENST00000477554 ZNF138P52744 262 aa12.62□□□□□ -0.39
PTPN7-209ENST00000477554 ZNF674Q2M3X9 581 aa12.62□□□□□ -0.39
PTPN7-209ENST00000477554 SGK494Q96LW2 274 aa12.62□□□□□ -0.39
PTPN7-209ENST00000477554 SMIM7Q9BQ49 75 aa12.62□□□□□ -0.39
PTPN7-209ENST00000477554 DERL1Q9BUN8 251 aa12.62□□□□□ -0.39
PTPN7-209ENST00000477554 ZNF492Q9P255 531 aa12.62□□□□□ -0.39
PTPN7-209ENST00000477554 LENEPQ9Y5L5 61 aa12.62□□□□□ -0.39
PTPN7-209ENST00000477554 DNAH6Q9C0G6 4158 aa12.61□□□□□ -0.39
PTPN7-209ENST00000477554 ZNF727A8MUV8 499 aa12.61□□□□□ -0.39
PTPN7-209ENST00000477554 AZU1P20160 251 aa12.61□□□□□ -0.39
PTPN7-209ENST00000477554 GNG4P50150 75 aa12.61□□□□□ -0.39
PTPN7-209ENST00000477554 PRNTQ86SH4 94 aa12.61□□□□□ -0.39
PTPN7-209ENST00000477554 IGF2BP2-AS1Q96M15 143 aa12.61□□□□□ -0.39
PTPN7-209ENST00000477554 ODF3Q96PU9 254 aa12.61□□□□□ -0.39
PTPN7-209ENST00000477554 NEU1Q99519 415 aa12.61□□□□□ -0.39
PTPN7-209ENST00000477554 NDFIP1Q9BT67 221 aa12.61□□□□□ -0.39
PTPN7-209ENST00000477554 ZFP30Q9Y2G7 519 aa12.61□□□□□ -0.39
PTPN7-209ENST00000477554 TRBV7-9A0A0J9YWB2 115 aa12.6□□□□□ -0.39
PTPN7-209ENST00000477554 C9JCJ5 164 aa12.6□□□□□ -0.39
PTPN7-209ENST00000477554 SAPCD1Q5SSQ6 148 aa12.6□□□□□ -0.39
PTPN7-209ENST00000477554 Q86TA4 180 aa12.6□□□□□ -0.39
PTPN7-209ENST00000477554 DNAH10Q8IVF4 4471 aa12.6□□□□□ -0.39
PTPN7-209ENST00000477554 IGLL5B9A064 214 aa12.59□□□□□ -0.39
PTPN7-209ENST00000477554 LTAP01374 205 aa12.59□□□□□ -0.39
PTPN7-209ENST00000477554 CT45A10P0DMU9 189 aa12.59□□□□□ -0.39
PTPN7-209ENST00000477554 BAGE2Q86Y30 109 aa12.59□□□□□ -0.39
PTPN7-209ENST00000477554 SMIM12Q96EX1 92 aa12.59□□□□□ -0.39
PTPN7-209ENST00000477554 KLK5Q9Y337 293 aaPredicted RBP12.59□□□□□ -0.39
PTPN7-209ENST00000477554 F8W036 122 aa12.58□□□□□ -0.4
PTPN7-209ENST00000477554 CENPWQ5EE01 88 aa12.58□□□□□ -0.4
PTPN7-209ENST00000477554 FAM222AQ5U5X8 452 aa12.58□□□□□ -0.4
PTPN7-209ENST00000477554 Q8TAT8 98 aa12.58□□□□□ -0.4
PTPN7-209ENST00000477554 NIPSNAP3BQ9BS92 247 aa12.58□□□□□ -0.4
PTPN7-209ENST00000477554 SEC11CQ9BY50 192 aa12.58□□□□□ -0.4
PTPN7-209ENST00000477554 GOLT1BQ9Y3E0 138 aa12.58□□□□□ -0.4
PTPN7-209ENST00000477554 PLAC8L1A1L4L8 177 aa12.57□□□□□ -0.4
PTPN7-209ENST00000477554 J3KRW8 73 aa12.57□□□□□ -0.4
PTPN7-209ENST00000477554 TSPOP30536 169 aa12.57□□□□□ -0.4
PTPN7-209ENST00000477554 LEPP41159 167 aa12.57□□□□□ -0.4
PTPN7-209ENST00000477554 TMEM183AQ8IXX5 376 aa12.57□□□□□ -0.4
PTPN7-209ENST00000477554 DKK2Q9UBU2 259 aa12.57□□□□□ -0.4
PTPN7-209ENST00000477554 APLNQ9ULZ1 77 aa12.57□□□□□ -0.4
PTPN7-209ENST00000477554 LY96Q9Y6Y9 160 aa12.57□□□□□ -0.4
PTPN7-209ENST00000477554 KRBOX1C9JBD0 128 aa12.56□□□□□ -0.4
PTPN7-209ENST00000477554 INSP01308 110 aa12.56□□□□□ -0.4
PTPN7-209ENST00000477554 TMEM241Q24JQ0 296 aa12.56□□□□□ -0.4
PTPN7-209ENST00000477554 FAM19A4Q96LR4 140 aa12.56□□□□□ -0.4
PTPN7-209ENST00000477554 NAT8Q9UHE5 227 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms