RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 BLOC1S1P78537 153 aa9.45□□□□□ -0.9
TOP3A-205ENST00000477508 PMS2P11Q13670 270 aa9.45□□□□□ -0.9
TOP3A-205ENST00000477508 KIR3DS1Q14943 382 aa9.45□□□□□ -0.9
TOP3A-205ENST00000477508 SAPCD1Q5SSQ6 148 aa9.45□□□□□ -0.9
TOP3A-205ENST00000477508 TXNDC17Q9BRA2 123 aa9.45□□□□□ -0.9
TOP3A-205ENST00000477508 LINC00467Q9BRT7 94 aa9.45□□□□□ -0.9
TOP3A-205ENST00000477508 A0A1B0GV50 99 aa9.44□□□□□ -0.9
TOP3A-205ENST00000477508 CXorf65A6NEN9 183 aa9.44□□□□□ -0.9
TOP3A-205ENST00000477508 ZNF705GA8MUZ8 300 aaPredicted RBP9.44□□□□□ -0.9
TOP3A-205ENST00000477508 ZNF324O75467 553 aaPredicted RBP9.44□□□□□ -0.9
TOP3A-205ENST00000477508 IFNA1P01562 189 aa9.44□□□□□ -0.9
TOP3A-205ENST00000477508 SPART-AS1P0CW21 52 aa9.44□□□□□ -0.9
TOP3A-205ENST00000477508 TAGLN2P37802 199 aaKnown RBP9.44□□□□□ -0.9
TOP3A-205ENST00000477508 FLI1Q01543 452 aaPredicted RBP9.44□□□□□ -0.9
TOP3A-205ENST00000477508 ALKAL2Q6UX46 152 aa9.44□□□□□ -0.9
TOP3A-205ENST00000477508 TMEM263Q8WUH6 116 aaKnown RBP9.44□□□□□ -0.9
TOP3A-205ENST00000477508 C16orf74Q96GX8 76 aa9.44□□□□□ -0.9
TOP3A-205ENST00000477508 TREM1Q9NP99 234 aa9.44□□□□□ -0.9
TOP3A-205ENST00000477508 PSG8Q9UQ74 426 aa9.44□□□□□ -0.9
TOP3A-205ENST00000477508 TRAV8-1A0A0A6YYK1 113 aa9.43□□□□□ -0.9
TOP3A-205ENST00000477508 S100A9P06702 114 aaKnown RBP9.43□□□□□ -0.9
TOP3A-205ENST00000477508 HTN1P15515 57 aa9.43□□□□□ -0.9
TOP3A-205ENST00000477508 BTN1A1Q13410 526 aa9.43□□□□□ -0.9
TOP3A-205ENST00000477508 GNG13Q9P2W3 67 aa9.43□□□□□ -0.9
TOP3A-205ENST00000477508 C11orf94C9JXX5 98 aa9.42□□□□□ -0.9
TOP3A-205ENST00000477508 IGLV2-11P01706 119 aa9.42□□□□□ -0.9
TOP3A-205ENST00000477508 EMP1P54849 157 aa9.42□□□□□ -0.9
TOP3A-205ENST00000477508 Q6AWC8 147 aa9.42□□□□□ -0.9
TOP3A-205ENST00000477508 PRNTQ86SH4 94 aa9.42□□□□□ -0.9
TOP3A-205ENST00000477508 EIF4E3Q8N5X7 224 aaKnown RBP9.42□□□□□ -0.9
TOP3A-205ENST00000477508 ZNF680Q8NEM1 530 aa9.42□□□□□ -0.9
TOP3A-205ENST00000477508 FMC1Q96HJ9 113 aa9.42□□□□□ -0.9
TOP3A-205ENST00000477508 ZFP30Q9Y2G7 519 aa9.42□□□□□ -0.9
TOP3A-205ENST00000477508 KLF12Q9Y4X4 402 aa9.42□□□□□ -0.9
TOP3A-205ENST00000477508 IGHV1OR15-1A0A075B7D0 117 aa9.41□□□□□ -0.9
TOP3A-205ENST00000477508 TRAV21A0A0B4J279 112 aa9.41□□□□□ -0.9
TOP3A-205ENST00000477508 TRBV6-1A0A0K0K1D8 114 aa9.41□□□□□ -0.9
TOP3A-205ENST00000477508 LYRM9A8MSI8 78 aa9.41□□□□□ -0.9
TOP3A-205ENST00000477508 RGS13O14921 159 aa9.41□□□□□ -0.9
TOP3A-205ENST00000477508 EREGO14944 169 aa9.41□□□□□ -0.9
TOP3A-205ENST00000477508 AZU1P20160 251 aa9.41□□□□□ -0.9
TOP3A-205ENST00000477508 ATP5G3P48201 142 aa9.41□□□□□ -0.9
TOP3A-205ENST00000477508 UBE2G1P62253 170 aa9.41□□□□□ -0.9
TOP3A-205ENST00000477508 CCL20P78556 96 aa9.41□□□□□ -0.9
TOP3A-205ENST00000477508 ANXA2RQ3ZCQ2 193 aa9.41□□□□□ -0.9
TOP3A-205ENST00000477508 SMUG1Q53HV7 270 aa9.41□□□□□ -0.9
TOP3A-205ENST00000477508 PRR9Q5T870 116 aa9.41□□□□□ -0.9
TOP3A-205ENST00000477508 RNASE8Q8TDE3 154 aaKnown RBP9.41□□□□□ -0.9
TOP3A-205ENST00000477508 TVP23CQ96ET8 276 aa9.41□□□□□ -0.9
TOP3A-205ENST00000477508 DKK2Q9UBU2 259 aa9.41□□□□□ -0.9
TOP3A-205ENST00000477508 TIMM8BQ9Y5J9 83 aaPredicted RBP9.41□□□□□ -0.9
TOP3A-205ENST00000477508 NUPR2A6NF83 97 aa9.4□□□□□ -0.9
TOP3A-205ENST00000477508 CBY3A6NI87 242 aa9.4□□□□□ -0.9
TOP3A-205ENST00000477508 SNURFLB1AK76 121 aa9.4□□□□□ -0.9
TOP3A-205ENST00000477508 AKR1C3P42330 323 aa9.4□□□□□ -0.9
TOP3A-205ENST00000477508 NANOS2P60321 138 aaKnown RBP9.4□□□□□ -0.9
TOP3A-205ENST00000477508 TMEM183BQ1AE95 376 aa9.4□□□□□ -0.9
TOP3A-205ENST00000477508 CASC10Q5T4H9 136 aa9.4□□□□□ -0.9
TOP3A-205ENST00000477508 FAM222AQ5U5X8 452 aa9.4□□□□□ -0.9
TOP3A-205ENST00000477508 FAM159AQ6UWV7 190 aa9.4□□□□□ -0.9
TOP3A-205ENST00000477508 SGK494Q96LW2 274 aa9.4□□□□□ -0.9
TOP3A-205ENST00000477508 LINC00479Q96M42 142 aa9.4□□□□□ -0.9
TOP3A-205ENST00000477508 TRAV34A0A0B4J273 112 aa9.39□□□□□ -0.91
TOP3A-205ENST00000477508 PDE6DO43924 150 aa9.39□□□□□ -0.91
TOP3A-205ENST00000477508 MEF2BQ02080 365 aaPredicted RBP9.39□□□□□ -0.91
TOP3A-205ENST00000477508 IBA57Q5T440 356 aaKnown RBP9.39□□□□□ -0.91
TOP3A-205ENST00000477508 ZFAND6Q6FIF0 208 aa9.39□□□□□ -0.91
TOP3A-205ENST00000477508 LYPD6BQ8NI32 183 aa9.39□□□□□ -0.91
TOP3A-205ENST00000477508 PHLDA1Q8WV24 401 aaPredicted RBP9.39□□□□□ -0.91
TOP3A-205ENST00000477508 KCNS1Q96KK3 526 aa9.39□□□□□ -0.91
TOP3A-205ENST00000477508 VAX2Q9UIW0 290 aa9.39□□□□□ -0.91
TOP3A-205ENST00000477508 KLK5Q9Y337 293 aaPredicted RBP9.39□□□□□ -0.91
TOP3A-205ENST00000477508 PLAC8L1A1L4L8 177 aa9.38□□□□□ -0.91
TOP3A-205ENST00000477508 GCGP01275 180 aa9.38□□□□□ -0.91
TOP3A-205ENST00000477508 PRM2P04554 102 aa9.38□□□□□ -0.91
TOP3A-205ENST00000477508 BCL2P10415 239 aa9.38□□□□□ -0.91
TOP3A-205ENST00000477508 DAZ2Q13117 558 aaKnown RBP9.38□□□□□ -0.91
TOP3A-205ENST00000477508 C12orf74Q32Q52 190 aa9.38□□□□□ -0.91
TOP3A-205ENST00000477508 TDRG1Q3Y452 100 aa9.38□□□□□ -0.91
TOP3A-205ENST00000477508 CEMP1Q6PRD7 247 aaPredicted RBP9.38□□□□□ -0.91
TOP3A-205ENST00000477508 TEX261Q6UWH6 196 aa9.38□□□□□ -0.91
TOP3A-205ENST00000477508 COX8CQ7Z4L0 72 aa9.38□□□□□ -0.91
TOP3A-205ENST00000477508 Q86TA4 180 aa9.38□□□□□ -0.91
TOP3A-205ENST00000477508 C2CD4CQ8TF44 421 aa9.38□□□□□ -0.91
TOP3A-205ENST00000477508 C11orf52Q96A22 123 aa9.38□□□□□ -0.91
TOP3A-205ENST00000477508 CELA1Q9UNI1 258 aa9.38□□□□□ -0.91
TOP3A-205ENST00000477508 TRGV11A0A075B6L2 103 aa9.37□□□□□ -0.91
TOP3A-205ENST00000477508 TRAV10A0A0B4J240 114 aa9.37□□□□□ -0.91
TOP3A-205ENST00000477508 SCO2A0A1W2PP80 73 aa9.37□□□□□ -0.91
TOP3A-205ENST00000477508 LCE2BO14633 110 aa9.37□□□□□ -0.91
TOP3A-205ENST00000477508 PFN1P07737 140 aaKnown RBP9.37□□□□□ -0.91
TOP3A-205ENST00000477508 DAD1P61803 113 aa9.37□□□□□ -0.91
TOP3A-205ENST00000477508 C8orf49Q96NF6 230 aa9.37□□□□□ -0.91
TOP3A-205ENST00000477508 FABP5P3A8MUU1 101 aa9.36□□□□□ -0.91
TOP3A-205ENST00000477508 LTAP01374 205 aa9.36□□□□□ -0.91
TOP3A-205ENST00000477508 ZNF415Q09FC8 603 aa9.36□□□□□ -0.91
TOP3A-205ENST00000477508 MUC21Q5SSG8 566 aa9.36□□□□□ -0.91
TOP3A-205ENST00000477508 Q6ZTC4 211 aa9.36□□□□□ -0.91
TOP3A-205ENST00000477508 TMEM183AQ8IXX5 376 aa9.36□□□□□ -0.91
TOP3A-205ENST00000477508 SDF2L1Q9HCN8 221 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms