RNA–Protein interactions for RNA: ENST00000477489.1

LDB3-206, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best)

Gene LDB3, Length 433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-206ENST00000477489 APCSP02743 223 aa5.06□□□□□ -1.6
LDB3-206ENST00000477489 APOHP02749 345 aaPredicted RBP5.06□□□□□ -1.6
LDB3-206ENST00000477489 PF4P02776 101 aa5.06□□□□□ -1.6
LDB3-206ENST00000477489 CRISP2P16562 243 aa5.06□□□□□ -1.6
LDB3-206ENST00000477489 CBLN1P23435 193 aa5.06□□□□□ -1.6
LDB3-206ENST00000477489 KLF5Q13887 457 aaPredicted RBP5.06□□□□□ -1.6
LDB3-206ENST00000477489 LINC00322Q6ZN03 302 aaPredicted RBP5.06□□□□□ -1.6
LDB3-206ENST00000477489 ZNF493Q6ZR52 646 aa5.06□□□□□ -1.6
LDB3-206ENST00000477489 APRG1Q8IVJ8 170 aa5.06□□□□□ -1.6
LDB3-206ENST00000477489 KLHDC1Q8N7A1 406 aa5.06□□□□□ -1.6
LDB3-206ENST00000477489 OR10J6PQ8NGY7 276 aa5.06□□□□□ -1.6
LDB3-206ENST00000477489 SMR3AQ99954 134 aa5.06□□□□□ -1.6
LDB3-206ENST00000477489 CNFNQ9BYD5 112 aa5.06□□□□□ -1.6
LDB3-206ENST00000477489 YAE1D1Q9NRH1 226 aa5.06□□□□□ -1.6
LDB3-206ENST00000477489 LINC01619G3V211 115 aa5.05□□□□□ -1.6
LDB3-206ENST00000477489 SMAD7O15105 426 aaKnown RBP5.05□□□□□ -1.6
LDB3-206ENST00000477489 SH2D1AO60880 128 aa5.05□□□□□ -1.6
LDB3-206ENST00000477489 NDUFA7O95182 113 aa5.05□□□□□ -1.6
LDB3-206ENST00000477489 CA1P00915 261 aaPredicted RBP5.05□□□□□ -1.6
LDB3-206ENST00000477489 MED14OSP0DP75 135 aa5.05□□□□□ -1.6
LDB3-206ENST00000477489 RAB4AP20338 218 aa5.05□□□□□ -1.6
LDB3-206ENST00000477489 CTRLP40313 264 aa5.05□□□□□ -1.6
LDB3-206ENST00000477489 CRIP1P50238 77 aa5.05□□□□□ -1.6
LDB3-206ENST00000477489 TCL1AP56279 114 aa5.05□□□□□ -1.6
LDB3-206ENST00000477489 HILS1P60008 231 aa5.05□□□□□ -1.6
LDB3-206ENST00000477489 SNRPD3P62318 126 aaKnown RBP5.05□□□□□ -1.6
LDB3-206ENST00000477489 S100A12P80511 92 aa5.05□□□□□ -1.6
LDB3-206ENST00000477489 TMEM95Q3KNT9 176 aa5.05□□□□□ -1.6
LDB3-206ENST00000477489 MRPL54Q6P161 138 aaKnown RBP5.05□□□□□ -1.6
LDB3-206ENST00000477489 Q6ZSV7 163 aa5.05□□□□□ -1.6
LDB3-206ENST00000477489 IL17RELQ6ZVW7 336 aa5.05□□□□□ -1.6
LDB3-206ENST00000477489 TCF24Q7RTU0 167 aa5.05□□□□□ -1.6
LDB3-206ENST00000477489 ZNF738Q8NE65 137 aa5.05□□□□□ -1.6
LDB3-206ENST00000477489 GTSF1Q8WW33 167 aa5.05□□□□□ -1.6
LDB3-206ENST00000477489 SGK494Q96LW2 274 aa5.05□□□□□ -1.6
LDB3-206ENST00000477489 VGLL1Q99990 258 aa5.05□□□□□ -1.6
LDB3-206ENST00000477489 AGPAT4-IT1Q9H0P7 198 aa5.05□□□□□ -1.6
LDB3-206ENST00000477489 IGHV3OR16-8A0A075B7F1 116 aa5.04□□□□□ -1.6
LDB3-206ENST00000477489 TRAV21A0A0B4J279 112 aa5.04□□□□□ -1.6
LDB3-206ENST00000477489 ZNF207O43670 478 aaKnown RBP5.04□□□□□ -1.6
LDB3-206ENST00000477489 IGLC6P0CF74 106 aa5.04□□□□□ -1.6
LDB3-206ENST00000477489 SRD5A1P18405 259 aa5.04□□□□□ -1.6
LDB3-206ENST00000477489 HOXD3P31249 432 aaPredicted RBP5.04□□□□□ -1.6
LDB3-206ENST00000477489 RAB4BP61018 213 aa5.04□□□□□ -1.6
LDB3-206ENST00000477489 TM4SF20Q53R12 229 aa5.04□□□□□ -1.6
LDB3-206ENST00000477489 OR8A1Q8NGG7 326 aa5.04□□□□□ -1.6
LDB3-206ENST00000477489 DCANP1Q8TF63 244 aa5.04□□□□□ -1.6
LDB3-206ENST00000477489 DPF1Q92782 380 aa5.04□□□□□ -1.6
LDB3-206ENST00000477489 FAM19A4Q96LR4 140 aa5.04□□□□□ -1.6
LDB3-206ENST00000477489 C8orf49Q96NF6 230 aa5.04□□□□□ -1.6
LDB3-206ENST00000477489 HIST1H2BLQ99880 126 aa5.04□□□□□ -1.6
LDB3-206ENST00000477489 GPR61Q9BZJ8 451 aa5.04□□□□□ -1.6
LDB3-206ENST00000477489 SIGLEC8Q9NYZ4 499 aa5.04□□□□□ -1.6
LDB3-206ENST00000477489 COL6A5A8TX70 2615 aa5.03□□□□□ -1.6
LDB3-206ENST00000477489 ATRQ13535 2644 aa5.03□□□□□ -1.6
LDB3-206ENST00000477489 IGHV4-4A0A075B6R2 117 aa5.03□□□□□ -1.6
LDB3-206ENST00000477489 IGHV4OR15-8A0A075B7B6 117 aa5.03□□□□□ -1.6
LDB3-206ENST00000477489 A0A087WW49 117 aa5.03□□□□□ -1.6
LDB3-206ENST00000477489 TRAV25A0A0B4J276 109 aa5.03□□□□□ -1.6
LDB3-206ENST00000477489 IGHV3-66A0A0C4DH42 116 aa5.03□□□□□ -1.6
LDB3-206ENST00000477489 C2orf70A6NJV1 201 aa5.03□□□□□ -1.6
LDB3-206ENST00000477489 IFITM10A6NMD0 228 aa5.03□□□□□ -1.6
LDB3-206ENST00000477489 ZNF705FA8MVS1 300 aaPredicted RBP5.03□□□□□ -1.6
LDB3-206ENST00000477489 PRAC2D3DTV9 90 aa5.03□□□□□ -1.6
LDB3-206ENST00000477489 K7EQG2 157 aa5.03□□□□□ -1.6
LDB3-206ENST00000477489 DUSP14O95147 198 aaKnown RBP5.03□□□□□ -1.6
LDB3-206ENST00000477489 PPBPP02775 128 aa5.03□□□□□ -1.6
LDB3-206ENST00000477489 PMCHP20382 165 aa5.03□□□□□ -1.6
LDB3-206ENST00000477489 HLA-DMBP28068 263 aa5.03□□□□□ -1.6
LDB3-206ENST00000477489 TSPOP30536 169 aa5.03□□□□□ -1.6
LDB3-206ENST00000477489 LEPP41159 167 aa5.03□□□□□ -1.6
LDB3-206ENST00000477489 CACNG7P62955 275 aa5.03□□□□□ -1.6
LDB3-206ENST00000477489 BAGE3Q86Y29 109 aa5.03□□□□□ -1.6
LDB3-206ENST00000477489 RNF182Q8N6D2 247 aa5.03□□□□□ -1.6
LDB3-206ENST00000477489 FER1L6-AS1Q8NA97 138 aa5.03□□□□□ -1.6
LDB3-206ENST00000477489 OR1N2Q8NGR9 330 aa5.03□□□□□ -1.6
LDB3-206ENST00000477489 PGLYRP4Q96LB8 373 aa5.03□□□□□ -1.6
LDB3-206ENST00000477489 C12orf57Q99622 126 aa5.03□□□□□ -1.6
LDB3-206ENST00000477489 LAMTOR2Q9Y2Q5 125 aa5.03□□□□□ -1.6
LDB3-206ENST00000477489 JMJD1CQ15652 2540 aa5.03□□□□□ -1.6
LDB3-206ENST00000477489 FLNAP21333 2647 aaKnown RBP5.03□□□□□ -1.6
LDB3-206ENST00000477489 STAB1Q9NY15 2570 aa5.03□□□□□ -1.6
LDB3-206ENST00000477489 NSD1Q96L73 2696 aaPredicted RBP5.02□□□□□ -1.61
LDB3-206ENST00000477489 IGHV3OR16-13A0A075B7E8 117 aa5.02□□□□□ -1.61
LDB3-206ENST00000477489 LOC102724200A0A096LPH7 203 aaPredicted RBP5.02□□□□□ -1.61
LDB3-206ENST00000477489 IGHV3-49A0A0A0MS15 119 aa5.02□□□□□ -1.61
LDB3-206ENST00000477489 IGHV3-74A0A0B4J1X5 117 aa5.02□□□□□ -1.61
LDB3-206ENST00000477489 A0A1B0GUS0 222 aa5.02□□□□□ -1.61
LDB3-206ENST00000477489 AMBPP02760 352 aa5.02□□□□□ -1.61
LDB3-206ENST00000477489 ORM1P02763 201 aa5.02□□□□□ -1.61
LDB3-206ENST00000477489 GPX1P07203 203 aa5.02□□□□□ -1.61
LDB3-206ENST00000477489 OR5AL1P0C617 328 aa5.02□□□□□ -1.61
LDB3-206ENST00000477489 FABP4P15090 132 aa5.02□□□□□ -1.61
LDB3-206ENST00000477489 SRIP30626 198 aa5.02□□□□□ -1.61
LDB3-206ENST00000477489 CAMPP49913 170 aa5.02□□□□□ -1.61
LDB3-206ENST00000477489 CMC4P56277 68 aaPredicted RBP5.02□□□□□ -1.61
LDB3-206ENST00000477489 SYNJ2BPP57105 145 aa5.02□□□□□ -1.61
LDB3-206ENST00000477489 RPL11P62913 178 aaKnown RBP5.02□□□□□ -1.61
LDB3-206ENST00000477489 SLAQ13239 276 aa5.02□□□□□ -1.61
LDB3-206ENST00000477489 FHL3Q13643 280 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms