RNA–Protein interactions for RNA: ENST00000476994.1

SREBF1-211, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-211ENST00000476994 KIR2DL5BA0A0G2JPC4 375 aa12.86□□□□□ -0.35
SREBF1-211ENST00000476994 M0R2Z0 102 aa12.86□□□□□ -0.35
SREBF1-211ENST00000476994 SPINK13Q1W4C9 94 aa12.86□□□□□ -0.35
SREBF1-211ENST00000476994 MORN3Q6PF18 240 aaPredicted RBP12.86□□□□□ -0.35
SREBF1-211ENST00000476994 KIR2DL5AQ8N109 375 aa12.86□□□□□ -0.35
SREBF1-211ENST00000476994 KIR2DL5BQ8NHK3 375 aa12.86□□□□□ -0.35
SREBF1-211ENST00000476994 MLST8Q9BVC4 326 aa12.86□□□□□ -0.35
SREBF1-211ENST00000476994 FXYD7P58549 80 aa12.85□□□□□ -0.35
SREBF1-211ENST00000476994 UBE2G1P62253 170 aa12.85□□□□□ -0.35
SREBF1-211ENST00000476994 CENPWQ5EE01 88 aa12.85□□□□□ -0.35
SREBF1-211ENST00000476994 C8orf49Q96NF6 230 aa12.85□□□□□ -0.35
SREBF1-211ENST00000476994 TREM1Q9NP99 234 aa12.85□□□□□ -0.35
SREBF1-211ENST00000476994 C9JCJ5 164 aa12.84□□□□□ -0.35
SREBF1-211ENST00000476994 RBMY1A1P0DJD3 496 aaKnown RBP12.84□□□□□ -0.35
SREBF1-211ENST00000476994 RBMY1CP0DJD4 496 aa12.84□□□□□ -0.35
SREBF1-211ENST00000476994 LEPP41159 167 aa12.84□□□□□ -0.35
SREBF1-211ENST00000476994 CDKN1BP46527 198 aa12.84□□□□□ -0.35
SREBF1-211ENST00000476994 RBMY1FQ15415 496 aaKnown RBP12.84□□□□□ -0.35
SREBF1-211ENST00000476994 TMEM183AQ8IXX5 376 aa12.84□□□□□ -0.35
SREBF1-211ENST00000476994 CSNK1G2-AS1Q8NCQ2 148 aa12.84□□□□□ -0.35
SREBF1-211ENST00000476994 CSTL1Q9H114 145 aa12.84□□□□□ -0.35
SREBF1-211ENST00000476994 ZFP30Q9Y2G7 519 aa12.84□□□□□ -0.35
SREBF1-211ENST00000476994 DYNC2H1Q8NCM8 4307 aaKnown RBP12.84□□□□□ -0.35
SREBF1-211ENST00000476994 SAPCD1Q5SSQ6 148 aa12.83□□□□□ -0.36
SREBF1-211ENST00000476994 GFI1BQ5VTD9 330 aa12.83□□□□□ -0.36
SREBF1-211ENST00000476994 TRAV12-2A0A075B6T6 113 aa12.82□□□□□ -0.36
SREBF1-211ENST00000476994 PGPEP1LA6NFU8 196 aa12.82□□□□□ -0.36
SREBF1-211ENST00000476994 SFTA3P0C7M3 94 aa12.82□□□□□ -0.36
SREBF1-211ENST00000476994 ADCYAP1P18509 176 aa12.82□□□□□ -0.36
SREBF1-211ENST00000476994 TSPOP30536 169 aa12.82□□□□□ -0.36
SREBF1-211ENST00000476994 ZNF80P51504 273 aaPredicted RBP12.82□□□□□ -0.36
SREBF1-211ENST00000476994 CEBPGP53567 150 aa12.82□□□□□ -0.36
SREBF1-211ENST00000476994 BTN1A1Q13410 526 aa12.82□□□□□ -0.36
SREBF1-211ENST00000476994 Q6ZQT7 251 aa12.82□□□□□ -0.36
SREBF1-211ENST00000476994 BAGE2Q86Y30 109 aa12.82□□□□□ -0.36
SREBF1-211ENST00000476994 ZC2HC1AQ96GY0 325 aa12.82□□□□□ -0.36
SREBF1-211ENST00000476994 XCL2Q9UBD3 114 aa12.82□□□□□ -0.36
SREBF1-211ENST00000476994 CA1P00915 261 aaPredicted RBP12.81□□□□□ -0.36
SREBF1-211ENST00000476994 AMBPP02760 352 aa12.81□□□□□ -0.36
SREBF1-211ENST00000476994 CRIP1P50238 77 aa12.81□□□□□ -0.36
SREBF1-211ENST00000476994 APOC4P55056 127 aa12.81□□□□□ -0.36
SREBF1-211ENST00000476994 NUTF2P61970 127 aaKnown RBP12.81□□□□□ -0.36
SREBF1-211ENST00000476994 ZNF674Q2M3X9 581 aa12.81□□□□□ -0.36
SREBF1-211ENST00000476994 Q6AWC8 147 aa12.81□□□□□ -0.36
SREBF1-211ENST00000476994 NHLRC2Q8NBF2 726 aa12.81□□□□□ -0.36
SREBF1-211ENST00000476994 SMIM12Q96EX1 92 aa12.81□□□□□ -0.36
SREBF1-211ENST00000476994 SMIM7Q9BQ49 75 aa12.81□□□□□ -0.36
SREBF1-211ENST00000476994 NDFIP1Q9BT67 221 aa12.81□□□□□ -0.36
SREBF1-211ENST00000476994 TMEM218A2RU14 115 aa12.8□□□□□ -0.36
SREBF1-211ENST00000476994 C7orf71A4D174 169 aa12.8□□□□□ -0.36
SREBF1-211ENST00000476994 ZNF727A8MUV8 499 aa12.8□□□□□ -0.36
SREBF1-211ENST00000476994 J3KRW8 73 aa12.8□□□□□ -0.36
SREBF1-211ENST00000476994 ZNF324O75467 553 aaPredicted RBP12.8□□□□□ -0.36
SREBF1-211ENST00000476994 GNG4P50150 75 aa12.8□□□□□ -0.36
SREBF1-211ENST00000476994 FAM74A3Q4VXF1 159 aa12.8□□□□□ -0.36
SREBF1-211ENST00000476994 SOHLH1Q5JUK2 328 aa12.8□□□□□ -0.36
SREBF1-211ENST00000476994 C1orf158Q8N1D5 194 aa12.8□□□□□ -0.36
SREBF1-211ENST00000476994 LY96Q9Y6Y9 160 aa12.8□□□□□ -0.36
SREBF1-211ENST00000476994 K7EN84 100 aa12.79□□□□□ -0.36
SREBF1-211ENST00000476994 UBE2CO00762 179 aa12.79□□□□□ -0.36
SREBF1-211ENST00000476994 GPX1P07203 203 aa12.79□□□□□ -0.36
SREBF1-211ENST00000476994 SMUG1Q53HV7 270 aa12.79□□□□□ -0.36
SREBF1-211ENST00000476994 SLC7A5P1Q8MH63 180 aa12.79□□□□□ -0.36
SREBF1-211ENST00000476994 OCC1Q8TAD7 63 aa12.79□□□□□ -0.36
SREBF1-211ENST00000476994 SACSQ9NZJ4 4579 aa12.79□□□□□ -0.36
SREBF1-211ENST00000476994 CSMD3Q7Z407 3707 aa12.78□□□□□ -0.36
SREBF1-211ENST00000476994 RYR2Q92736 4967 aa12.78□□□□□ -0.36
SREBF1-211ENST00000476994 GCGP01275 180 aa12.78□□□□□ -0.36
SREBF1-211ENST00000476994 INSP01308 110 aa12.78□□□□□ -0.36
SREBF1-211ENST00000476994 RNASE4P34096 147 aaKnown RBP12.78□□□□□ -0.36
SREBF1-211ENST00000476994 C20orf144Q9BQM9 153 aa12.78□□□□□ -0.36
SREBF1-211ENST00000476994 C1QTNF4Q9BXJ3 329 aa12.78□□□□□ -0.36
SREBF1-211ENST00000476994 TRAV12-3A0A0B4J271 114 aa12.77□□□□□ -0.37
SREBF1-211ENST00000476994 C10orf91Q5T1B1 145 aa12.77□□□□□ -0.37
SREBF1-211ENST00000476994 ZNF705AQ6ZN79 300 aaPredicted RBP12.77□□□□□ -0.37
SREBF1-211ENST00000476994 Q6ZWC4 215 aa12.77□□□□□ -0.37
SREBF1-211ENST00000476994 LINC01551Q86U37 167 aa12.77□□□□□ -0.37
SREBF1-211ENST00000476994 C11orf21Q9P2W6 132 aa12.77□□□□□ -0.37
SREBF1-211ENST00000476994 NDUFA5Q16718 116 aa12.76□□□□□ -0.37
SREBF1-211ENST00000476994 DEFB135Q30KP9 77 aa12.76□□□□□ -0.37
SREBF1-211ENST00000476994 SDF2L1Q9HCN8 221 aa12.76□□□□□ -0.37
SREBF1-211ENST00000476994 RETNQ9HD89 108 aa12.76□□□□□ -0.37
SREBF1-211ENST00000476994 NAT8Q9UHE5 227 aa12.76□□□□□ -0.37
SREBF1-211ENST00000476994 STARD9Q9P2P6 4700 aa12.76□□□□□ -0.37
SREBF1-211ENST00000476994 C19orf71A6NCJ1 209 aa12.75□□□□□ -0.37
SREBF1-211ENST00000476994 SH2D1AO60880 128 aa12.75□□□□□ -0.37
SREBF1-211ENST00000476994 PFN1P07737 140 aaKnown RBP12.75□□□□□ -0.37
SREBF1-211ENST00000476994 RPL23P62829 140 aaKnown RBP12.75□□□□□ -0.37
SREBF1-211ENST00000476994 OR5I1Q13606 314 aa12.75□□□□□ -0.37
SREBF1-211ENST00000476994 TMEM241Q24JQ0 296 aa12.75□□□□□ -0.37
SREBF1-211ENST00000476994 RNF183Q96D59 192 aa12.75□□□□□ -0.37
SREBF1-211ENST00000476994 TRAV21A0A0B4J279 112 aa12.74□□□□□ -0.37
SREBF1-211ENST00000476994 FAM162BQ5T6X4 162 aa12.74□□□□□ -0.37
SREBF1-211ENST00000476994 ZNF575Q86XF7 245 aa12.74□□□□□ -0.37
SREBF1-211ENST00000476994 LYSTQ99698 3801 aa12.74□□□□□ -0.37
SREBF1-211ENST00000476994 LINC00467Q9BRT7 94 aa12.74□□□□□ -0.37
SREBF1-211ENST00000476994 SEC11CQ9BY50 192 aa12.74□□□□□ -0.37
SREBF1-211ENST00000476994 X6R8D5 127 aa12.74□□□□□ -0.37
SREBF1-211ENST00000476994 MUC4Q99102 2169 aa12.73□□□□□ -0.37
SREBF1-211ENST00000476994 FABP5P3A8MUU1 101 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms