RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 RPH3ALQ9UNE2 315 aa7.21□□□□□ -1.26
CCM2-208ENST00000476594 TNFSF18Q9UNG2 199 aa7.21□□□□□ -1.26
CCM2-208ENST00000476594 TRGV11A0A075B6L2 103 aa7.2□□□□□ -1.26
CCM2-208ENST00000476594 ZNF324O75467 553 aaPredicted RBP7.2□□□□□ -1.26
CCM2-208ENST00000476594 CXorf1O96002 111 aa7.2□□□□□ -1.26
CCM2-208ENST00000476594 STAG3L2P0CL84 134 aa7.2□□□□□ -1.26
CCM2-208ENST00000476594 STAG3L3P0CL85 134 aa7.2□□□□□ -1.26
CCM2-208ENST00000476594 ARL14EPLP0DKL9 152 aa7.2□□□□□ -1.26
CCM2-208ENST00000476594 TCL1AP56279 114 aa7.2□□□□□ -1.26
CCM2-208ENST00000476594 CD300CQ08708 224 aa7.2□□□□□ -1.26
CCM2-208ENST00000476594 LGALS9BQ3B8N2 356 aa7.2□□□□□ -1.26
CCM2-208ENST00000476594 LCE2AQ5TA79 106 aaPredicted RBP7.2□□□□□ -1.26
CCM2-208ENST00000476594 FAM159AQ6UWV7 190 aa7.2□□□□□ -1.26
CCM2-208ENST00000476594 ZFAND2AQ8N6M9 145 aa7.2□□□□□ -1.26
CCM2-208ENST00000476594 LINC00612Q8N6U2 182 aa7.2□□□□□ -1.26
CCM2-208ENST00000476594 Q8TAT8 98 aa7.2□□□□□ -1.26
CCM2-208ENST00000476594 ST6GAL2Q96JF0 529 aa7.2□□□□□ -1.26
CCM2-208ENST00000476594 C18orf15Q96N68 181 aa7.2□□□□□ -1.26
CCM2-208ENST00000476594 VPS13DQ5THJ4 4388 aa7.2□□□□□ -1.26
CCM2-208ENST00000476594 DNAH6Q9C0G6 4158 aa7.19□□□□□ -1.26
CCM2-208ENST00000476594 TRGV1A0A0A0MS02 117 aa7.19□□□□□ -1.26
CCM2-208ENST00000476594 FBLL1A6NHQ2 334 aaKnown RBP7.19□□□□□ -1.26
CCM2-208ENST00000476594 H3BNG1 76 aa7.19□□□□□ -1.26
CCM2-208ENST00000476594 SLAQ13239 276 aa7.19□□□□□ -1.26
CCM2-208ENST00000476594 ZFP69Q49AA0 526 aa7.19□□□□□ -1.26
CCM2-208ENST00000476594 AKR1C8PQ5T2L2 129 aa7.19□□□□□ -1.26
CCM2-208ENST00000476594 Q6AWC8 147 aa7.19□□□□□ -1.26
CCM2-208ENST00000476594 GOLT1AQ6ZVE7 132 aa7.19□□□□□ -1.26
CCM2-208ENST00000476594 IQCF2Q8IXL9 164 aa7.19□□□□□ -1.26
CCM2-208ENST00000476594 C5orf17Q8NAS9 161 aa7.19□□□□□ -1.26
CCM2-208ENST00000476594 RAB24Q969Q5 203 aa7.19□□□□□ -1.26
CCM2-208ENST00000476594 GSN-AS1Q9NRJ2 163 aa7.19□□□□□ -1.26
CCM2-208ENST00000476594 TRAV21A0A0B4J279 112 aa7.18□□□□□ -1.26
CCM2-208ENST00000476594 HMGB3O15347 200 aaKnown RBP7.18□□□□□ -1.26
CCM2-208ENST00000476594 GCHFRP30047 84 aa7.18□□□□□ -1.26
CCM2-208ENST00000476594 KCNS1Q96KK3 526 aa7.18□□□□□ -1.26
CCM2-208ENST00000476594 SPXQ9BT56 116 aa7.18□□□□□ -1.26
CCM2-208ENST00000476594 TRAV26-1A0A087WT03 109 aa7.17□□□□□ -1.26
CCM2-208ENST00000476594 CTXND1A0A1B0GTU2 59 aa7.17□□□□□ -1.26
CCM2-208ENST00000476594 RNF222A6NCQ9 220 aa7.17□□□□□ -1.26
CCM2-208ENST00000476594 ARPC5O15511 151 aa7.17□□□□□ -1.26
CCM2-208ENST00000476594 SPINK4O60575 86 aa7.17□□□□□ -1.26
CCM2-208ENST00000476594 PPT1P50897 306 aa7.17□□□□□ -1.26
CCM2-208ENST00000476594 RPL7L1Q6DKI1 246 aaKnown RBP7.17□□□□□ -1.26
CCM2-208ENST00000476594 Q6ZTI0 123 aa7.17□□□□□ -1.26
CCM2-208ENST00000476594 C11orf72Q8NBR9 251 aa7.17□□□□□ -1.26
CCM2-208ENST00000476594 STOML3Q8TAV4 291 aa7.17□□□□□ -1.26
CCM2-208ENST00000476594 NKX6-2Q9C056 277 aaPredicted RBP7.17□□□□□ -1.26
CCM2-208ENST00000476594 TREM1Q9NP99 234 aa7.17□□□□□ -1.26
CCM2-208ENST00000476594 KLF12Q9Y4X4 402 aa7.17□□□□□ -1.26
CCM2-208ENST00000476594 IGLV2-18A0A075B6J9 118 aa7.16□□□□□ -1.26
CCM2-208ENST00000476594 A0A1W2PRE2 83 aa7.16□□□□□ -1.26
CCM2-208ENST00000476594 M0R2N4 97 aa7.16□□□□□ -1.26
CCM2-208ENST00000476594 EIF5AP63241 154 aaKnown RBP7.16□□□□□ -1.26
CCM2-208ENST00000476594 Q5BKY6 102 aa7.16□□□□□ -1.26
CCM2-208ENST00000476594 TTC32Q5I0X7 151 aa7.16□□□□□ -1.26
CCM2-208ENST00000476594 MUC21Q5SSG8 566 aa7.16□□□□□ -1.26
CCM2-208ENST00000476594 PRR9Q5T870 116 aa7.16□□□□□ -1.26
CCM2-208ENST00000476594 CYB561D1Q8N8Q1 229 aa7.16□□□□□ -1.26
CCM2-208ENST00000476594 SUN5Q8TC36 379 aa7.16□□□□□ -1.26
CCM2-208ENST00000476594 SH3BGRL3Q9H299 93 aa7.16□□□□□ -1.26
CCM2-208ENST00000476594 TMPRSS5Q9H3S3 457 aa7.16□□□□□ -1.26
CCM2-208ENST00000476594 SDF2L1Q9HCN8 221 aa7.16□□□□□ -1.26
CCM2-208ENST00000476594 NAGKQ9UJ70 344 aa7.16□□□□□ -1.26
CCM2-208ENST00000476594 A0A0J9YY99 117 aa7.15□□□□□ -1.26
CCM2-208ENST00000476594 J3QL48 77 aa7.15□□□□□ -1.26
CCM2-208ENST00000476594 EIF3GO75821 320 aaKnown RBP eCLIP7.15□□□□□ -1.26
CCM2-208ENST00000476594 TCRAP04437 139 aa7.15□□□□□ -1.26
CCM2-208ENST00000476594 SUMO1P63165 101 aaKnown RBP7.15□□□□□ -1.26
CCM2-208ENST00000476594 ZNF345Q14585 488 aa7.15□□□□□ -1.26
CCM2-208ENST00000476594 TMEM183BQ1AE95 376 aa7.15□□□□□ -1.26
CCM2-208ENST00000476594 TDRG1Q3Y452 100 aa7.15□□□□□ -1.26
CCM2-208ENST00000476594 SAPCD1Q5SSQ6 148 aa7.15□□□□□ -1.26
CCM2-208ENST00000476594 TMEM183AQ8IXX5 376 aa7.15□□□□□ -1.26
CCM2-208ENST00000476594 TMEM75Q8N9X5 138 aa7.15□□□□□ -1.26
CCM2-208ENST00000476594 PRO0255Q9UI72 69 aa7.15□□□□□ -1.26
CCM2-208ENST00000476594 ICOSQ9Y6W8 199 aa7.15□□□□□ -1.26
CCM2-208ENST00000476594 TRGV4A0A0C4DH28 118 aa7.14□□□□□ -1.27
CCM2-208ENST00000476594 A0A0D9SG52 128 aa7.14□□□□□ -1.27
CCM2-208ENST00000476594 KANTRA0A1W2PQU2 76 aa7.14□□□□□ -1.27
CCM2-208ENST00000476594 F6UZH7 168 aa7.14□□□□□ -1.27
CCM2-208ENST00000476594 PAX4O43316 350 aa7.14□□□□□ -1.27
CCM2-208ENST00000476594 IFNA7P01567 189 aa7.14□□□□□ -1.27
CCM2-208ENST00000476594 GNG5P63218 68 aa7.14□□□□□ -1.27
CCM2-208ENST00000476594 FLI1Q01543 452 aaPredicted RBP7.14□□□□□ -1.27
CCM2-208ENST00000476594 SMUG1Q53HV7 270 aa7.14□□□□□ -1.27
CCM2-208ENST00000476594 C1orf134Q5TEV5 83 aa7.14□□□□□ -1.27
CCM2-208ENST00000476594 SSX7Q7RTT5 188 aa7.14□□□□□ -1.27
CCM2-208ENST00000476594 PCNPQ8WW12 178 aaKnown RBP7.14□□□□□ -1.27
CCM2-208ENST00000476594 MRPL16Q9NX20 251 aaKnown RBP7.14□□□□□ -1.27
CCM2-208ENST00000476594 TP53TG3Q9ULZ0 132 aa7.14□□□□□ -1.27
CCM2-208ENST00000476594 EPDR1Q9UM22 224 aa7.14□□□□□ -1.27
CCM2-208ENST00000476594 TRAV8-1A0A0A6YYK1 113 aa7.13□□□□□ -1.27
CCM2-208ENST00000476594 MAP1LC3B2A6NCE7 125 aa7.13□□□□□ -1.27
CCM2-208ENST00000476594 PRSS29PA6NIE9 313 aa7.13□□□□□ -1.27
CCM2-208ENST00000476594 HMSDA8MTL9 139 aa7.13□□□□□ -1.27
CCM2-208ENST00000476594 UMAD1C9J7I0 102 aa7.13□□□□□ -1.27
CCM2-208ENST00000476594 HOXA5P20719 270 aa7.13□□□□□ -1.27
CCM2-208ENST00000476594 HIST1H2BAQ96A08 127 aa7.13□□□□□ -1.27
CCM2-208ENST00000476594 TCEAL7Q9BRU2 100 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms