RNA–Protein interactions for RNA: ENST00000476428.1

MAP1LC3A-204, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 5

Gene MAP1LC3A, Length 851 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-204ENST00000476428 SERTM2A0A1B0GWG4 89 aa14.95□□□□□ -0.02
MAP1LC3A-204ENST00000476428 FAM74A7A6NL05 159 aa14.95□□□□□ -0.02
MAP1LC3A-204ENST00000476428 ZFP69Q49AA0 526 aa14.95□□□□□ -0.02
MAP1LC3A-204ENST00000476428 SLC51BQ86UW2 128 aa14.95□□□□□ -0.02
MAP1LC3A-204ENST00000476428 TMEM263Q8WUH6 116 aaKnown RBP14.95□□□□□ -0.02
MAP1LC3A-204ENST00000476428 SGK494Q96LW2 274 aa14.95□□□□□ -0.02
MAP1LC3A-204ENST00000476428 LCE6AA0A183 80 aa14.94□□□□□ -0.02
MAP1LC3A-204ENST00000476428 TVP23CQ96ET8 276 aa14.94□□□□□ -0.02
MAP1LC3A-204ENST00000476428 LINC00467Q9BRT7 94 aa14.94□□□□□ -0.02
MAP1LC3A-204ENST00000476428 LYRM9A8MSI8 78 aa14.93□□□□□ -0.02
MAP1LC3A-204ENST00000476428 EIF5AL1Q6IS14 154 aaKnown RBP14.93□□□□□ -0.02
MAP1LC3A-204ENST00000476428 C2CD4CQ8TF44 421 aa14.93□□□□□ -0.02
MAP1LC3A-204ENST00000476428 KRTAP17-1Q9BYP8 105 aa14.93□□□□□ -0.02
MAP1LC3A-204ENST00000476428 DEFB131BA0A096LNP1 70 aa14.92□□□□□ -0.02
MAP1LC3A-204ENST00000476428 K7EQM0 130 aa14.92□□□□□ -0.02
MAP1LC3A-204ENST00000476428 IFNA7P01567 189 aa14.92□□□□□ -0.02
MAP1LC3A-204ENST00000476428 H2AFB1P0C5Y9 115 aa14.92□□□□□ -0.02
MAP1LC3A-204ENST00000476428 DAD1P61803 113 aa14.92□□□□□ -0.02
MAP1LC3A-204ENST00000476428 CYB561D1Q8N8Q1 229 aa14.92□□□□□ -0.02
MAP1LC3A-204ENST00000476428 NKX6-2Q9C056 277 aaPredicted RBP14.92□□□□□ -0.02
MAP1LC3A-204ENST00000476428 TIMM8BQ9Y5J9 83 aaPredicted RBP14.92□□□□□ -0.02
MAP1LC3A-204ENST00000476428 SACSQ9NZJ4 4579 aa14.91□□□□□ -0.02
MAP1LC3A-204ENST00000476428 A0A1B0GV50 99 aa14.91□□□□□ -0.02
MAP1LC3A-204ENST00000476428 IGLV2-11P01706 119 aa14.91□□□□□ -0.02
MAP1LC3A-204ENST00000476428 EIF4E3Q8N5X7 224 aaKnown RBP14.91□□□□□ -0.02
MAP1LC3A-204ENST00000476428 ATG101Q9BSB4 218 aa14.91□□□□□ -0.02
MAP1LC3A-204ENST00000476428 TREM1Q9NP99 234 aa14.91□□□□□ -0.02
MAP1LC3A-204ENST00000476428 NOP10Q9NPE3 64 aaKnown RBP14.91□□□□□ -0.02
MAP1LC3A-204ENST00000476428 PSG8Q9UQ74 426 aa14.91□□□□□ -0.02
MAP1LC3A-204ENST00000476428 IGHV1OR15-1A0A075B7D0 117 aa14.9□□□□□ -0.02
MAP1LC3A-204ENST00000476428 CBY3A6NI87 242 aa14.9□□□□□ -0.02
MAP1LC3A-204ENST00000476428 IGLL5B9A064 214 aa14.9□□□□□ -0.02
MAP1LC3A-204ENST00000476428 RGS13O14921 159 aa14.9□□□□□ -0.02
MAP1LC3A-204ENST00000476428 RAB5CP51148 216 aa14.9□□□□□ -0.02
MAP1LC3A-204ENST00000476428 ANXA2RQ3ZCQ2 193 aa14.9□□□□□ -0.02
MAP1LC3A-204ENST00000476428 Q6AWC8 147 aa14.9□□□□□ -0.02
MAP1LC3A-204ENST00000476428 LINC00479Q96M42 142 aa14.9□□□□□ -0.02
MAP1LC3A-204ENST00000476428 PLECQ15149 4684 aaKnown RBP14.9□□□□□ -0.02
MAP1LC3A-204ENST00000476428 DEFB130BP0DP73 79 aa14.89□□□□□ -0.03
MAP1LC3A-204ENST00000476428 DEFB130AP0DP74 79 aa14.89□□□□□ -0.03
MAP1LC3A-204ENST00000476428 SULT1A2P50226 295 aa14.89□□□□□ -0.03
MAP1LC3A-204ENST00000476428 FLI1Q01543 452 aaPredicted RBP14.89□□□□□ -0.03
MAP1LC3A-204ENST00000476428 CST9LP1Q5W188 147 aa14.89□□□□□ -0.03
MAP1LC3A-204ENST00000476428 TMEM75Q8N9X5 138 aa14.89□□□□□ -0.03
MAP1LC3A-204ENST00000476428 TP53TG3Q9ULZ0 132 aa14.89□□□□□ -0.03
MAP1LC3A-204ENST00000476428 TRAV34A0A0B4J273 112 aa14.88□□□□□ -0.03
MAP1LC3A-204ENST00000476428 SNURFLB1AK76 121 aa14.88□□□□□ -0.03
MAP1LC3A-204ENST00000476428 F6UZH7 168 aa14.88□□□□□ -0.03
MAP1LC3A-204ENST00000476428 PEX7O00628 323 aa14.88□□□□□ -0.03
MAP1LC3A-204ENST00000476428 PAGE4O60829 102 aa14.88□□□□□ -0.03
MAP1LC3A-204ENST00000476428 NKX2-5P52952 324 aaPredicted RBP14.88□□□□□ -0.03
MAP1LC3A-204ENST00000476428 PRNTQ86SH4 94 aa14.88□□□□□ -0.03
MAP1LC3A-204ENST00000476428 C11orf72Q8NBR9 251 aa14.88□□□□□ -0.03
MAP1LC3A-204ENST00000476428 HIST1H2BAQ96A08 127 aa14.88□□□□□ -0.03
MAP1LC3A-204ENST00000476428 NDFIP1Q9BT67 221 aa14.88□□□□□ -0.03
MAP1LC3A-204ENST00000476428 GSN-AS1Q9NRJ2 163 aa14.88□□□□□ -0.03
MAP1LC3A-204ENST00000476428 FBLL1A6NHQ2 334 aaKnown RBP14.87□□□□□ -0.03
MAP1LC3A-204ENST00000476428 ATP5G3P48201 142 aa14.87□□□□□ -0.03
MAP1LC3A-204ENST00000476428 MUC21Q5SSG8 566 aa14.87□□□□□ -0.03
MAP1LC3A-204ENST00000476428 ZNF680Q8NEM1 530 aa14.87□□□□□ -0.03
MAP1LC3A-204ENST00000476428 C8orf49Q96NF6 230 aa14.87□□□□□ -0.03
MAP1LC3A-204ENST00000476428 ARL2-SNX15V9GYD0 113 aa14.87□□□□□ -0.03
MAP1LC3A-204ENST00000476428 HTN3P15516 51 aa14.86□□□□□ -0.03
MAP1LC3A-204ENST00000476428 CCL20P78556 96 aa14.86□□□□□ -0.03
MAP1LC3A-204ENST00000476428 DAZ2Q13117 558 aaKnown RBP14.86□□□□□ -0.03
MAP1LC3A-204ENST00000476428 APLNQ9ULZ1 77 aa14.86□□□□□ -0.03
MAP1LC3A-204ENST00000476428 IGHV4-4A0A075B6R2 117 aa14.85□□□□□ -0.03
MAP1LC3A-204ENST00000476428 TRAV1-1A0A0B4J248 108 aa14.85□□□□□ -0.03
MAP1LC3A-204ENST00000476428 TRAV21A0A0B4J279 112 aa14.85□□□□□ -0.03
MAP1LC3A-204ENST00000476428 TCTAP57738 103 aa14.85□□□□□ -0.03
MAP1LC3A-204ENST00000476428 LINC00612Q8N6U2 182 aa14.85□□□□□ -0.03
MAP1LC3A-204ENST00000476428 KLF12Q9Y4X4 402 aa14.85□□□□□ -0.03
MAP1LC3A-204ENST00000476428 LYSTQ99698 3801 aa14.84□□□□□ -0.03
MAP1LC3A-204ENST00000476428 PPT1P50897 306 aa14.84□□□□□ -0.03
MAP1LC3A-204ENST00000476428 ZNF80P51504 273 aaPredicted RBP14.84□□□□□ -0.03
MAP1LC3A-204ENST00000476428 SAPCD1Q5SSQ6 148 aa14.84□□□□□ -0.03
MAP1LC3A-204ENST00000476428 FAM159AQ6UWV7 190 aa14.84□□□□□ -0.03
MAP1LC3A-204ENST00000476428 TCEAL7Q9BRU2 100 aa14.84□□□□□ -0.03
MAP1LC3A-204ENST00000476428 BOLA1Q9Y3E2 137 aa14.84□□□□□ -0.03
MAP1LC3A-204ENST00000476428 TCL1AP56279 114 aa14.83□□□□□ -0.04
MAP1LC3A-204ENST00000476428 SMUG1Q53HV7 270 aa14.83□□□□□ -0.04
MAP1LC3A-204ENST00000476428 IBA57Q5T440 356 aaKnown RBP14.83□□□□□ -0.04
MAP1LC3A-204ENST00000476428 NAGKQ9UJ70 344 aa14.83□□□□□ -0.04
MAP1LC3A-204ENST00000476428 GAGE12BA1L429 117 aa14.82□□□□□ -0.04
MAP1LC3A-204ENST00000476428 GAGE7O76087 117 aa14.82□□□□□ -0.04
MAP1LC3A-204ENST00000476428 GCGP01275 180 aa14.82□□□□□ -0.04
MAP1LC3A-204ENST00000476428 GAGE12FP0CL80 117 aa14.82□□□□□ -0.04
MAP1LC3A-204ENST00000476428 GAGE12GP0CL81 117 aa14.82□□□□□ -0.04
MAP1LC3A-204ENST00000476428 GAGE12IP0CL82 117 aa14.82□□□□□ -0.04
MAP1LC3A-204ENST00000476428 Q6ZTI0 123 aa14.82□□□□□ -0.04
MAP1LC3A-204ENST00000476428 LINC00476Q8WZB0 136 aa14.82□□□□□ -0.04
MAP1LC3A-204ENST00000476428 DNAH1Q9P2D7 4330 aa14.82□□□□□ -0.04
MAP1LC3A-204ENST00000476428 ATP5G1P05496 136 aa14.81□□□□□ -0.04
MAP1LC3A-204ENST00000476428 TMEM183BQ1AE95 376 aa14.81□□□□□ -0.04
MAP1LC3A-204ENST00000476428 TDRG1Q3Y452 100 aa14.81□□□□□ -0.04
MAP1LC3A-204ENST00000476428 TMEM183AQ8IXX5 376 aa14.81□□□□□ -0.04
MAP1LC3A-204ENST00000476428 MDFICQ9P1T7 246 aa14.81□□□□□ -0.04
MAP1LC3A-204ENST00000476428 TEX46H3BTG2 121 aa14.8□□□□□ -0.04
MAP1LC3A-204ENST00000476428 GNRH2O43555 120 aa14.8□□□□□ -0.04
MAP1LC3A-204ENST00000476428 SPINK4O60575 86 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms