RNA–Protein interactions for RNA: ENST00000475560.5

SRGAP3-205, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 703 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-205ENST00000475560 A0A1W2PPB8 328 aa2.42□□□□□ -2.02
SRGAP3-205ENST00000475560 KIR3DP1A8MWS1 328 aa2.42□□□□□ -2.02
SRGAP3-205ENST00000475560 IGKV4-1P06312 121 aa2.42□□□□□ -2.02
SRGAP3-205ENST00000475560 C10orf55Q5SWW7 151 aa2.42□□□□□ -2.02
SRGAP3-205ENST00000475560 KRTAP26-1Q6PEX3 210 aa2.42□□□□□ -2.02
SRGAP3-205ENST00000475560 ZCCHC23Q6ZST2 131 aa2.42□□□□□ -2.02
SRGAP3-205ENST00000475560 ATOH7Q8N100 152 aa2.42□□□□□ -2.02
SRGAP3-205ENST00000475560 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.42□□□□□ -2.02
SRGAP3-205ENST00000475560 CEP162Q5TB80 1403 aa2.42□□□□□ -2.02
SRGAP3-205ENST00000475560 FGD6Q6ZV73 1430 aa2.42□□□□□ -2.02
SRGAP3-205ENST00000475560 DIP2BQ9P265 1576 aa2.41□□□□□ -2.02
SRGAP3-205ENST00000475560 IGHV1-24A0A0C4DH33 117 aa2.41□□□□□ -2.02
SRGAP3-205ENST00000475560 EDF1O60869 148 aaKnown RBP2.41□□□□□ -2.02
SRGAP3-205ENST00000475560 APODP05090 189 aa2.41□□□□□ -2.02
SRGAP3-205ENST00000475560 S100PP25815 95 aa2.41□□□□□ -2.02
SRGAP3-205ENST00000475560 C3orf62Q6ZUJ4 267 aa2.41□□□□□ -2.02
SRGAP3-205ENST00000475560 CCDC167Q9P0B6 97 aa2.41□□□□□ -2.02
SRGAP3-205ENST00000475560 POLEQ07864 2286 aa2.41□□□□□ -2.02
SRGAP3-205ENST00000475560 ZFHX2Q9C0A1 2572 aaPredicted RBP2.41□□□□□ -2.02
SRGAP3-205ENST00000475560 KMT2BQ9UMN6 2715 aaPredicted RBP2.4□□□□□ -2.03
SRGAP3-205ENST00000475560 LOC107984156A0A0G2JMH3 177 aa2.4□□□□□ -2.03
SRGAP3-205ENST00000475560 CDC42EP2O14613 210 aa2.4□□□□□ -2.03
SRGAP3-205ENST00000475560 RNASE3P12724 160 aaKnown RBP2.4□□□□□ -2.03
SRGAP3-205ENST00000475560 FOXI2Q6ZQN5 318 aa2.4□□□□□ -2.03
SRGAP3-205ENST00000475560 GKN2Q86XP6 184 aa2.4□□□□□ -2.03
SRGAP3-205ENST00000475560 ARL17AQ8IVW1 177 aa2.4□□□□□ -2.03
SRGAP3-205ENST00000475560 C4orf3Q8WVX3 66 aa2.4□□□□□ -2.03
SRGAP3-205ENST00000475560 CIB3Q96Q77 187 aaPredicted RBP2.4□□□□□ -2.03
SRGAP3-205ENST00000475560 LAMB2P55268 1798 aa2.4□□□□□ -2.03
SRGAP3-205ENST00000475560 CASZ1Q86V15 1759 aa2.4□□□□□ -2.03
SRGAP3-205ENST00000475560 CHD1O14646 1710 aa2.39□□□□□ -2.03
SRGAP3-205ENST00000475560 POLA1P09884 1462 aaPredicted RBP2.39□□□□□ -2.03
SRGAP3-205ENST00000475560 NLRP1Q9C000 1473 aa2.39□□□□□ -2.03
SRGAP3-205ENST00000475560 ANKRD36BQ8N2N9 1353 aa2.39□□□□□ -2.03
SRGAP3-205ENST00000475560 LAMB4A4D0S4 1761 aa2.39□□□□□ -2.03
SRGAP3-205ENST00000475560 HMGXB3Q12766 1538 aa2.39□□□□□ -2.03
SRGAP3-205ENST00000475560 CFAP43Q8NDM7 1665 aa2.39□□□□□ -2.03
SRGAP3-205ENST00000475560 TRBV6-8A0A0A6YYG3 113 aa2.39□□□□□ -2.03
SRGAP3-205ENST00000475560 IFITM5A6NNB3 132 aa2.39□□□□□ -2.03
SRGAP3-205ENST00000475560 ZNF736B4DX44 427 aaPredicted RBP2.39□□□□□ -2.03
SRGAP3-205ENST00000475560 J3QRE1 110 aa2.39□□□□□ -2.03
SRGAP3-205ENST00000475560 M0R2P5 195 aa2.39□□□□□ -2.03
SRGAP3-205ENST00000475560 PYYP10082 97 aa2.39□□□□□ -2.03
SRGAP3-205ENST00000475560 ZNF25P17030 456 aaPredicted RBP2.39□□□□□ -2.03
SRGAP3-205ENST00000475560 CNBPP62633 177 aaKnown RBP2.39□□□□□ -2.03
SRGAP3-205ENST00000475560 MIR22HGQ0VDD5 57 aa2.39□□□□□ -2.03
SRGAP3-205ENST00000475560 COA5Q86WW8 74 aa2.39□□□□□ -2.03
SRGAP3-205ENST00000475560 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.39□□□□□ -2.03
SRGAP3-205ENST00000475560 ZNF431Q8TF32 576 aaPredicted RBP2.39□□□□□ -2.03
SRGAP3-205ENST00000475560 PATE1Q8WXA2 126 aa2.39□□□□□ -2.03
SRGAP3-205ENST00000475560 SMIM7Q9BQ49 75 aa2.39□□□□□ -2.03
SRGAP3-205ENST00000475560 SAR1AQ9NR31 198 aa2.39□□□□□ -2.03
SRGAP3-205ENST00000475560 GNG8Q9UK08 70 aa2.39□□□□□ -2.03
SRGAP3-205ENST00000475560 ABCA10Q8WWZ4 1543 aa2.38□□□□□ -2.03
SRGAP3-205ENST00000475560 KIAA2026Q5HYC2 2103 aa2.38□□□□□ -2.03
SRGAP3-205ENST00000475560 CLIP1P30622 1438 aa2.38□□□□□ -2.03
SRGAP3-205ENST00000475560 NAIPQ13075 1403 aa2.38□□□□□ -2.03
SRGAP3-205ENST00000475560 OCIAD2Q56VL3 154 aa2.38□□□□□ -2.03
SRGAP3-205ENST00000475560 SCIMPQ6UWF3 145 aa2.38□□□□□ -2.03
SRGAP3-205ENST00000475560 Q6ZRN7 208 aaPredicted RBP2.38□□□□□ -2.03
SRGAP3-205ENST00000475560 TMEM106BQ9NUM4 274 aa2.38□□□□□ -2.03
SRGAP3-205ENST00000475560 MYH1P12882 1939 aa2.38□□□□□ -2.03
SRGAP3-205ENST00000475560 CPSF1Q10570 1443 aaKnown RBP2.37□□□□□ -2.03
SRGAP3-205ENST00000475560 LOC100130705A0A1B0GUX0 176 aa2.37□□□□□ -2.03
SRGAP3-205ENST00000475560 BBIP1A8MTZ0 92 aa2.37□□□□□ -2.03
SRGAP3-205ENST00000475560 HYPMO75409 117 aa2.37□□□□□ -2.03
SRGAP3-205ENST00000475560 NUMA1Q14980 2115 aa2.37□□□□□ -2.03
SRGAP3-205ENST00000475560 CCSMST1Q4G0I0 132 aa2.37□□□□□ -2.03
SRGAP3-205ENST00000475560 Q6ZUT4 128 aa2.37□□□□□ -2.03
SRGAP3-205ENST00000475560 SNX29P2Q8IUI4 249 aa2.37□□□□□ -2.03
SRGAP3-205ENST00000475560 ATP6V0E2Q8NHE4 81 aa2.37□□□□□ -2.03
SRGAP3-205ENST00000475560 LINC00052Q96N35 136 aa2.37□□□□□ -2.03
SRGAP3-205ENST00000475560 C12orf57Q99622 126 aa2.37□□□□□ -2.03
SRGAP3-205ENST00000475560 PDE4DIPQ5VU43 2346 aa2.37□□□□□ -2.03
SRGAP3-205ENST00000475560 IFT140Q96RY7 1462 aa2.37□□□□□ -2.03
SRGAP3-205ENST00000475560 KIAA1549LQ6ZVL6 1849 aa2.37□□□□□ -2.03
SRGAP3-205ENST00000475560 PRDM15P57071 1507 aaPredicted RBP2.37□□□□□ -2.03
SRGAP3-205ENST00000475560 CLASP1Q7Z460 1538 aa2.37□□□□□ -2.03
SRGAP3-205ENST00000475560 BAHCC1Q9P281 2608 aa2.37□□□□□ -2.03
SRGAP3-205ENST00000475560 LAMC3Q9Y6N6 1575 aa2.36□□□□□ -2.03
SRGAP3-205ENST00000475560 MICAL3Q7RTP6 2002 aa2.36□□□□□ -2.03
SRGAP3-205ENST00000475560 TRBV6-5A0A0K0K1A5 114 aa2.36□□□□□ -2.03
SRGAP3-205ENST00000475560 ATP6V1G2-DDX39BF2Z307 99 aa2.36□□□□□ -2.03
SRGAP3-205ENST00000475560 F6UZH7 168 aa2.36□□□□□ -2.03
SRGAP3-205ENST00000475560 FGF7P21781 194 aa2.36□□□□□ -2.03
SRGAP3-205ENST00000475560 TEX261Q6UWH6 196 aa2.36□□□□□ -2.03
SRGAP3-205ENST00000475560 IDO2Q6ZQW0 420 aa2.36□□□□□ -2.03
SRGAP3-205ENST00000475560 OR10AG1Q8NH19 301 aa2.36□□□□□ -2.03
SRGAP3-205ENST00000475560 DPH3Q96FX2 82 aa2.36□□□□□ -2.03
SRGAP3-205ENST00000475560 FAIMQ9NVQ4 179 aa2.36□□□□□ -2.03
SRGAP3-205ENST00000475560 ORMDL1Q9P0S3 153 aa2.36□□□□□ -2.03
SRGAP3-205ENST00000475560 NOP16Q9Y3C1 178 aaKnown RBP2.36□□□□□ -2.03
SRGAP3-205ENST00000475560 PLXNA4Q9HCM2 1894 aa2.36□□□□□ -2.03
SRGAP3-205ENST00000475560 KIF21BO75037 1637 aa2.35□□□□□ -2.03
SRGAP3-205ENST00000475560 PVALEFA0A1B0GWK0 134 aa2.35□□□□□ -2.03
SRGAP3-205ENST00000475560 CCL16O15467 120 aa2.35□□□□□ -2.03
SRGAP3-205ENST00000475560 PITX3O75364 302 aa2.35□□□□□ -2.03
SRGAP3-205ENST00000475560 COX7CP15954 63 aa2.35□□□□□ -2.03
SRGAP3-205ENST00000475560 ADCYAP1P18509 176 aa2.35□□□□□ -2.03
SRGAP3-205ENST00000475560 KRTAP10-1P60331 282 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms