RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 SH3BGRL3Q9H299 93 aa12.53□□□□□ -0.4
UPF3A-203ENST00000474056 TMPRSS5Q9H3S3 457 aa12.53□□□□□ -0.4
UPF3A-203ENST00000474056 TRAV26-1A0A087WT03 109 aa12.52□□□□□ -0.41
UPF3A-203ENST00000474056 A0A0J9YY99 117 aa12.52□□□□□ -0.41
UPF3A-203ENST00000474056 STAG3L2P0CL84 134 aa12.52□□□□□ -0.41
UPF3A-203ENST00000474056 STAG3L3P0CL85 134 aa12.52□□□□□ -0.41
UPF3A-203ENST00000474056 IBA57Q5T440 356 aaKnown RBP12.52□□□□□ -0.41
UPF3A-203ENST00000474056 Q6ZR54 194 aa12.52□□□□□ -0.41
UPF3A-203ENST00000474056 INO80EQ8NBZ0 244 aaPredicted RBP12.52□□□□□ -0.41
UPF3A-203ENST00000474056 OR2T35Q8NGX2 323 aa12.52□□□□□ -0.41
UPF3A-203ENST00000474056 CMTM2Q8TAZ6 248 aa12.52□□□□□ -0.41
UPF3A-203ENST00000474056 TNFSF18Q9UNG2 199 aa12.52□□□□□ -0.41
UPF3A-203ENST00000474056 TRGV1A0A0A0MS02 117 aa12.51□□□□□ -0.41
UPF3A-203ENST00000474056 G3V3Q6 166 aa12.51□□□□□ -0.41
UPF3A-203ENST00000474056 RTL8CO15255 209 aa12.51□□□□□ -0.41
UPF3A-203ENST00000474056 SERF2P84101 59 aa12.51□□□□□ -0.41
UPF3A-203ENST00000474056 FAM74A1Q5RGS3 127 aa12.51□□□□□ -0.41
UPF3A-203ENST00000474056 RPL7L1Q6DKI1 246 aaKnown RBP12.51□□□□□ -0.41
UPF3A-203ENST00000474056 GOLT1AQ6ZVE7 132 aa12.51□□□□□ -0.41
UPF3A-203ENST00000474056 RAB24Q969Q5 203 aa12.51□□□□□ -0.41
UPF3A-203ENST00000474056 GNPNAT1Q96EK6 184 aaPredicted RBP12.51□□□□□ -0.41
UPF3A-203ENST00000474056 ARPC5LQ9BPX5 153 aa12.51□□□□□ -0.41
UPF3A-203ENST00000474056 LENEPQ9Y5L5 61 aa12.51□□□□□ -0.41
UPF3A-203ENST00000474056 TRGV2A0A075B6R0 118 aa12.5□□□□□ -0.41
UPF3A-203ENST00000474056 SPINK4O60575 86 aa12.5□□□□□ -0.41
UPF3A-203ENST00000474056 GNG5P63218 68 aa12.5□□□□□ -0.41
UPF3A-203ENST00000474056 MUC21Q5SSG8 566 aa12.5□□□□□ -0.41
UPF3A-203ENST00000474056 Q6AWC8 147 aa12.5□□□□□ -0.41
UPF3A-203ENST00000474056 LINC00336Q6ZUF6 198 aa12.5□□□□□ -0.41
UPF3A-203ENST00000474056 TMED6Q8WW62 240 aa12.5□□□□□ -0.41
UPF3A-203ENST00000474056 MBP02144 154 aa12.49□□□□□ -0.41
UPF3A-203ENST00000474056 GCHFRP30047 84 aa12.49□□□□□ -0.41
UPF3A-203ENST00000474056 FAM3BP58499 235 aaPredicted RBP12.49□□□□□ -0.41
UPF3A-203ENST00000474056 SSX7Q7RTT5 188 aa12.49□□□□□ -0.41
UPF3A-203ENST00000474056 C18orf15Q96N68 181 aa12.49□□□□□ -0.41
UPF3A-203ENST00000474056 MRPL16Q9NX20 251 aaKnown RBP12.49□□□□□ -0.41
UPF3A-203ENST00000474056 LINC00588Q9Y4M8 146 aa12.49□□□□□ -0.41
UPF3A-203ENST00000474056 TRAV8-1A0A0A6YYK1 113 aa12.48□□□□□ -0.41
UPF3A-203ENST00000474056 CCL18P55774 89 aa12.48□□□□□ -0.41
UPF3A-203ENST00000474056 ARL6IP6Q8N6S5 226 aa12.48□□□□□ -0.41
UPF3A-203ENST00000474056 ZNRF2Q8NHG8 242 aa12.48□□□□□ -0.41
UPF3A-203ENST00000474056 SUN5Q8TC36 379 aa12.48□□□□□ -0.41
UPF3A-203ENST00000474056 BORCS7-ASMTA0A0B4J1R7 106 aa12.47□□□□□ -0.41
UPF3A-203ENST00000474056 ZNF415Q09FC8 603 aa12.47□□□□□ -0.41
UPF3A-203ENST00000474056 TVP23CQ96ET8 276 aa12.47□□□□□ -0.41
UPF3A-203ENST00000474056 ST6GAL2Q96JF0 529 aa12.47□□□□□ -0.41
UPF3A-203ENST00000474056 A0A1B0GVY2 172 aa12.46□□□□□ -0.41
UPF3A-203ENST00000474056 F6UZH7 168 aa12.46□□□□□ -0.41
UPF3A-203ENST00000474056 TMEM183BQ1AE95 376 aa12.46□□□□□ -0.41
UPF3A-203ENST00000474056 TMEM183AQ8IXX5 376 aa12.46□□□□□ -0.41
UPF3A-203ENST00000474056 VSIG2Q96IQ7 327 aa12.46□□□□□ -0.41
UPF3A-203ENST00000474056 SGK494Q96LW2 274 aa12.46□□□□□ -0.41
UPF3A-203ENST00000474056 ACTR3CQ9C0K3 210 aaPredicted RBP12.46□□□□□ -0.41
UPF3A-203ENST00000474056 MDFICQ9P1T7 246 aa12.46□□□□□ -0.41
UPF3A-203ENST00000474056 DYNC1H1Q14204 4646 aaKnown RBP12.45□□□□□ -0.42
UPF3A-203ENST00000474056 PRSS29PA6NIE9 313 aa12.45□□□□□ -0.42
UPF3A-203ENST00000474056 H3BNG1 76 aa12.45□□□□□ -0.42
UPF3A-203ENST00000474056 CXorf1O96002 111 aa12.45□□□□□ -0.42
UPF3A-203ENST00000474056 IGHV3-53P01767 116 aa12.45□□□□□ -0.42
UPF3A-203ENST00000474056 ZNF726P1Q15940 193 aa12.45□□□□□ -0.42
UPF3A-203ENST00000474056 FAM159AQ6UWV7 190 aa12.45□□□□□ -0.42
UPF3A-203ENST00000474056 NAGKQ9UJ70 344 aa12.45□□□□□ -0.42
UPF3A-203ENST00000474056 DNAH11Q96DT5 4516 aa12.44□□□□□ -0.42
UPF3A-203ENST00000474056 GGTLC3B5MD39 225 aa12.44□□□□□ -0.42
UPF3A-203ENST00000474056 SMLR1H3BR10 107 aa12.44□□□□□ -0.42
UPF3A-203ENST00000474056 ARPC5O15511 151 aa12.44□□□□□ -0.42
UPF3A-203ENST00000474056 TCRAP04437 139 aa12.44□□□□□ -0.42
UPF3A-203ENST00000474056 C5orf17Q8NAS9 161 aa12.44□□□□□ -0.42
UPF3A-203ENST00000474056 TREM1Q9NP99 234 aa12.44□□□□□ -0.42
UPF3A-203ENST00000474056 TMEM167BQ9NRX6 74 aa12.44□□□□□ -0.42
UPF3A-203ENST00000474056 HERC2O95714 4834 aa12.44□□□□□ -0.42
UPF3A-203ENST00000474056 TRGV11A0A075B6L2 103 aa12.43□□□□□ -0.42
UPF3A-203ENST00000474056 SUMO1P63165 101 aaKnown RBP12.43□□□□□ -0.42
UPF3A-203ENST00000474056 IQCF2Q8IXL9 164 aa12.43□□□□□ -0.42
UPF3A-203ENST00000474056 PKD1P98161 4303 aa12.43□□□□□ -0.42
UPF3A-203ENST00000474056 KIAA1109Q2LD37 5005 aa12.43□□□□□ -0.42
UPF3A-203ENST00000474056 PKHD1P08F94 4074 aa12.43□□□□□ -0.42
UPF3A-203ENST00000474056 A0A096LPF7 62 aa12.42□□□□□ -0.42
UPF3A-203ENST00000474056 TRAV21A0A0B4J279 112 aa12.42□□□□□ -0.42
UPF3A-203ENST00000474056 NBDYA0A0U1RRE5 68 aa12.42□□□□□ -0.42
UPF3A-203ENST00000474056 CTXND1A0A1B0GTU2 59 aa12.42□□□□□ -0.42
UPF3A-203ENST00000474056 SERTM2A0A1B0GWG4 89 aa12.42□□□□□ -0.42
UPF3A-203ENST00000474056 ESRGQ1W209 222 aa12.42□□□□□ -0.42
UPF3A-203ENST00000474056 TDRG1Q3Y452 100 aa12.42□□□□□ -0.42
UPF3A-203ENST00000474056 C1orf134Q5TEV5 83 aa12.42□□□□□ -0.42
UPF3A-203ENST00000474056 C8orf49Q96NF6 230 aa12.42□□□□□ -0.42
UPF3A-203ENST00000474056 CYTL1Q9NRR1 136 aa12.42□□□□□ -0.42
UPF3A-203ENST00000474056 TAAR5O14804 337 aa12.41□□□□□ -0.42
UPF3A-203ENST00000474056 GNRH2O43555 120 aa12.41□□□□□ -0.42
UPF3A-203ENST00000474056 TYMSP04818 313 aa12.41□□□□□ -0.42
UPF3A-203ENST00000474056 EPDR1Q9UM22 224 aa12.41□□□□□ -0.42
UPF3A-203ENST00000474056 IGLV2-11P01706 119 aa12.4□□□□□ -0.42
UPF3A-203ENST00000474056 SFTA3P0C7M3 94 aa12.4□□□□□ -0.42
UPF3A-203ENST00000474056 FGF8P55075 233 aaPredicted RBP12.4□□□□□ -0.42
UPF3A-203ENST00000474056 SOHLH1Q5JUK2 328 aa12.4□□□□□ -0.42
UPF3A-203ENST00000474056 AKR1C8PQ5T2L2 129 aa12.4□□□□□ -0.42
UPF3A-203ENST00000474056 SPXQ9BT56 116 aa12.4□□□□□ -0.42
UPF3A-203ENST00000474056 NDFIP1Q9BT67 221 aa12.4□□□□□ -0.42
UPF3A-203ENST00000474056 Q9H8V8 135 aa12.4□□□□□ -0.42
UPF3A-203ENST00000474056 PSG8Q9UQ74 426 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms