RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 GAGE12IP0CL82 117 aa10.07□□□□□ -0.8
VAMP4-203ENST00000474047 P0DMU3 169 aa10.07□□□□□ -0.8
VAMP4-203ENST00000474047 FAM231AP0DMU4 169 aa10.07□□□□□ -0.8
VAMP4-203ENST00000474047 FAM231CP0DMU5 169 aa10.07□□□□□ -0.8
VAMP4-203ENST00000474047 FGF8P55075 233 aaPredicted RBP10.07□□□□□ -0.8
VAMP4-203ENST00000474047 STOML3Q8TAV4 291 aa10.07□□□□□ -0.8
VAMP4-203ENST00000474047 SUN5Q8TC36 379 aa10.07□□□□□ -0.8
VAMP4-203ENST00000474047 LINC00467Q9BRT7 94 aa10.07□□□□□ -0.8
VAMP4-203ENST00000474047 NDFIP1Q9BT67 221 aa10.07□□□□□ -0.8
VAMP4-203ENST00000474047 GSN-AS1Q9NRJ2 163 aa10.07□□□□□ -0.8
VAMP4-203ENST00000474047 BCL2L11O43521 198 aa10.06□□□□□ -0.8
VAMP4-203ENST00000474047 IFNA7P01567 189 aa10.06□□□□□ -0.8
VAMP4-203ENST00000474047 ZNF726P1Q15940 193 aa10.06□□□□□ -0.8
VAMP4-203ENST00000474047 ANXA2RQ3ZCQ2 193 aa10.06□□□□□ -0.8
VAMP4-203ENST00000474047 TMEM88Q6PEY1 159 aa10.06□□□□□ -0.8
VAMP4-203ENST00000474047 TREM1Q9NP99 234 aa10.06□□□□□ -0.8
VAMP4-203ENST00000474047 DYNC2H1Q8NCM8 4307 aaKnown RBP10.06□□□□□ -0.8
VAMP4-203ENST00000474047 TRAV8-1A0A0A6YYK1 113 aa10.05□□□□□ -0.8
VAMP4-203ENST00000474047 MAP1LC3B2A6NCE7 125 aa10.05□□□□□ -0.8
VAMP4-203ENST00000474047 TCRAP04437 139 aa10.05□□□□□ -0.8
VAMP4-203ENST00000474047 UBE2G2P60604 165 aa10.05□□□□□ -0.8
VAMP4-203ENST00000474047 MUC21Q5SSG8 566 aa10.05□□□□□ -0.8
VAMP4-203ENST00000474047 FAM159AQ6UWV7 190 aa10.05□□□□□ -0.8
VAMP4-203ENST00000474047 TMUB2Q71RG4 321 aa10.05□□□□□ -0.8
VAMP4-203ENST00000474047 UBE2DNLQ8IWF7 75 aa10.05□□□□□ -0.8
VAMP4-203ENST00000474047 SGK494Q96LW2 274 aa10.05□□□□□ -0.8
VAMP4-203ENST00000474047 MAP1LC3BQ9GZQ8 125 aa10.05□□□□□ -0.8
VAMP4-203ENST00000474047 TMPRSS5Q9H3S3 457 aa10.05□□□□□ -0.8
VAMP4-203ENST00000474047 EPDR1Q9UM22 224 aa10.05□□□□□ -0.8
VAMP4-203ENST00000474047 TRGV2A0A075B6R0 118 aa10.04□□□□□ -0.8
VAMP4-203ENST00000474047 A0A1W2PRE2 83 aa10.04□□□□□ -0.8
VAMP4-203ENST00000474047 DAZ2Q13117 558 aaKnown RBP10.04□□□□□ -0.8
VAMP4-203ENST00000474047 OR5I1Q13606 314 aa10.04□□□□□ -0.8
VAMP4-203ENST00000474047 Q6ZQT7 251 aa10.04□□□□□ -0.8
VAMP4-203ENST00000474047 NAGKQ9UJ70 344 aa10.04□□□□□ -0.8
VAMP4-203ENST00000474047 BIRC6Q9NR09 4857 aa10.04□□□□□ -0.8
VAMP4-203ENST00000474047 TRGV1A0A0A0MS02 117 aa10.04□□□□□ -0.8
VAMP4-203ENST00000474047 SEC11BP0C7V7 166 aa10.04□□□□□ -0.8
VAMP4-203ENST00000474047 C15orf53Q8NAA6 179 aa10.04□□□□□ -0.8
VAMP4-203ENST00000474047 LYSTQ99698 3801 aa10.04□□□□□ -0.8
VAMP4-203ENST00000474047 NKX6-2Q9C056 277 aaPredicted RBP10.04□□□□□ -0.8
VAMP4-203ENST00000474047 TP53TG3Q9ULZ0 132 aa10.04□□□□□ -0.8
VAMP4-203ENST00000474047 hCG_2014768A0A024R1R8 64 aa10.03□□□□□ -0.8
VAMP4-203ENST00000474047 GGTLC3B5MD39 225 aa10.03□□□□□ -0.8
VAMP4-203ENST00000474047 UMAD1C9J7I0 102 aa10.03□□□□□ -0.8
VAMP4-203ENST00000474047 F6UZH7 168 aa10.03□□□□□ -0.8
VAMP4-203ENST00000474047 ZNF415Q09FC8 603 aa10.03□□□□□ -0.8
VAMP4-203ENST00000474047 IBA57Q5T440 356 aaKnown RBP10.03□□□□□ -0.8
VAMP4-203ENST00000474047 Q6AWC8 147 aa10.03□□□□□ -0.8
VAMP4-203ENST00000474047 Q6ZNX1 250 aa10.03□□□□□ -0.8
VAMP4-203ENST00000474047 Q6ZTI0 123 aa10.03□□□□□ -0.8
VAMP4-203ENST00000474047 CYB561D1Q8N8Q1 229 aa10.03□□□□□ -0.8
VAMP4-203ENST00000474047 C11orf72Q8NBR9 251 aa10.03□□□□□ -0.8
VAMP4-203ENST00000474047 FAM213BQ8TBF2 198 aa10.03□□□□□ -0.8
VAMP4-203ENST00000474047 ATG101Q9BSB4 218 aa10.03□□□□□ -0.8
VAMP4-203ENST00000474047 KLF12Q9Y4X4 402 aa10.03□□□□□ -0.8
VAMP4-203ENST00000474047 TRAV21A0A0B4J279 112 aa10.02□□□□□ -0.8
VAMP4-203ENST00000474047 NUDT3O95989 172 aa10.02□□□□□ -0.8
VAMP4-203ENST00000474047 TPT1P13693 172 aaKnown RBP10.02□□□□□ -0.8
VAMP4-203ENST00000474047 PPT1P50897 306 aa10.02□□□□□ -0.8
VAMP4-203ENST00000474047 TCL1AP56279 114 aa10.02□□□□□ -0.8
VAMP4-203ENST00000474047 FLI1Q01543 452 aaPredicted RBP10.02□□□□□ -0.8
VAMP4-203ENST00000474047 ZFP69Q49AA0 526 aa10.02□□□□□ -0.8
VAMP4-203ENST00000474047 PRNTQ86SH4 94 aa10.02□□□□□ -0.8
VAMP4-203ENST00000474047 POM121L12Q8N7R1 296 aa10.02□□□□□ -0.8
VAMP4-203ENST00000474047 PSG8Q9UQ74 426 aa10.02□□□□□ -0.8
VAMP4-203ENST00000474047 TRGV11A0A075B6L2 103 aa10.02□□□□□ -0.81
VAMP4-203ENST00000474047 FBLL1A6NHQ2 334 aaKnown RBP10.02□□□□□ -0.81
VAMP4-203ENST00000474047 FHITP49789 147 aa10.02□□□□□ -0.81
VAMP4-203ENST00000474047 TMEM183BQ1AE95 376 aa10.02□□□□□ -0.81
VAMP4-203ENST00000474047 TMEM183AQ8IXX5 376 aa10.02□□□□□ -0.81
VAMP4-203ENST00000474047 TCTE3Q8IZS6 198 aa10.02□□□□□ -0.81
VAMP4-203ENST00000474047 LINC00612Q8N6U2 182 aa10.02□□□□□ -0.81
VAMP4-203ENST00000474047 SFT2D1Q8WV19 159 aa10.02□□□□□ -0.81
VAMP4-203ENST00000474047 ALMS1Q8TCU4 4167 aa10.01□□□□□ -0.81
VAMP4-203ENST00000474047 SAPCD1Q5SSQ6 148 aa10.01□□□□□ -0.81
VAMP4-203ENST00000474047 CST9LP1Q5W188 147 aa10.01□□□□□ -0.81
VAMP4-203ENST00000474047 TMEM75Q8N9X5 138 aa10.01□□□□□ -0.81
VAMP4-203ENST00000474047 TVP23CQ96ET8 276 aa10.01□□□□□ -0.81
VAMP4-203ENST00000474047 A0A1B0GV50 99 aa10□□□□□ -0.81
VAMP4-203ENST00000474047 FAM74A7A6NL05 159 aa10□□□□□ -0.81
VAMP4-203ENST00000474047 EIF5AL1Q6IS14 154 aaKnown RBP10□□□□□ -0.81
VAMP4-203ENST00000474047 DPPA3Q6W0C5 159 aa10□□□□□ -0.81
VAMP4-203ENST00000474047 AKAP14Q86UN6 197 aa10□□□□□ -0.81
VAMP4-203ENST00000474047 MRPL16Q9NX20 251 aaKnown RBP10□□□□□ -0.81
VAMP4-203ENST00000474047 RYR2Q92736 4967 aa9.99□□□□□ -0.81
VAMP4-203ENST00000474047 PEX7O00628 323 aa9.99□□□□□ -0.81
VAMP4-203ENST00000474047 SPINK4O60575 86 aa9.99□□□□□ -0.81
VAMP4-203ENST00000474047 LGALS9BQ3B8N2 356 aa9.99□□□□□ -0.81
VAMP4-203ENST00000474047 SMUG1Q53HV7 270 aa9.99□□□□□ -0.81
VAMP4-203ENST00000474047 HIST1H2BAQ96A08 127 aa9.99□□□□□ -0.81
VAMP4-203ENST00000474047 KCNS1Q96KK3 526 aa9.99□□□□□ -0.81
VAMP4-203ENST00000474047 C8orf49Q96NF6 230 aa9.99□□□□□ -0.81
VAMP4-203ENST00000474047 SDF2L1Q9HCN8 221 aa9.99□□□□□ -0.81
VAMP4-203ENST00000474047 TRAV26-1A0A087WT03 109 aa9.99□□□□□ -0.81
VAMP4-203ENST00000474047 TRAV34A0A0B4J273 112 aa9.99□□□□□ -0.81
VAMP4-203ENST00000474047 A0A0J9YY99 117 aa9.99□□□□□ -0.81
VAMP4-203ENST00000474047 GCGP01275 180 aa9.99□□□□□ -0.81
VAMP4-203ENST00000474047 H2AFB1P0C5Y9 115 aa9.99□□□□□ -0.81
VAMP4-203ENST00000474047 SPXQ9BT56 116 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms