RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 DEFB131BA0A096LNP1 70 aa9.84□□□□□ -0.83
USF1-205ENST00000473969 FBLL1A6NHQ2 334 aaKnown RBP9.84□□□□□ -0.83
USF1-205ENST00000473969 GGTLC3B5MD39 225 aa9.84□□□□□ -0.83
USF1-205ENST00000473969 F6UZH7 168 aa9.84□□□□□ -0.83
USF1-205ENST00000473969 TEX46H3BTG2 121 aa9.84□□□□□ -0.83
USF1-205ENST00000473969 PPT1P50897 306 aa9.84□□□□□ -0.83
USF1-205ENST00000473969 CST9LP1Q5W188 147 aa9.84□□□□□ -0.83
USF1-205ENST00000473969 EIF4E3Q8N5X7 224 aaKnown RBP9.84□□□□□ -0.83
USF1-205ENST00000473969 CYB561D1Q8N8Q1 229 aa9.84□□□□□ -0.83
USF1-205ENST00000473969 MBD3L1Q8WWY6 194 aa9.84□□□□□ -0.83
USF1-205ENST00000473969 ATG101Q9BSB4 218 aa9.84□□□□□ -0.83
USF1-205ENST00000473969 TREM1Q9NP99 234 aa9.84□□□□□ -0.83
USF1-205ENST00000473969 A0A1B0GV50 99 aa9.83□□□□□ -0.84
USF1-205ENST00000473969 A0A1B0GVG6 124 aa9.83□□□□□ -0.84
USF1-205ENST00000473969 FAM74A7A6NL05 159 aa9.83□□□□□ -0.84
USF1-205ENST00000473969 IGLL5B9A064 214 aa9.83□□□□□ -0.84
USF1-205ENST00000473969 ZNF324O75467 553 aaPredicted RBP9.83□□□□□ -0.84
USF1-205ENST00000473969 DEFB130BP0DP73 79 aa9.83□□□□□ -0.84
USF1-205ENST00000473969 DEFB130AP0DP74 79 aa9.83□□□□□ -0.84
USF1-205ENST00000473969 ZNF680Q8NEM1 530 aa9.83□□□□□ -0.84
USF1-205ENST00000473969 NOP10Q9NPE3 64 aaKnown RBP9.83□□□□□ -0.84
USF1-205ENST00000473969 IGHV1OR15-1A0A075B7D0 117 aa9.82□□□□□ -0.84
USF1-205ENST00000473969 TRAV8-1A0A0A6YYK1 113 aa9.82□□□□□ -0.84
USF1-205ENST00000473969 HTN3P15516 51 aa9.82□□□□□ -0.84
USF1-205ENST00000473969 TCTAP57738 103 aa9.82□□□□□ -0.84
USF1-205ENST00000473969 TMEM75Q8N9X5 138 aa9.82□□□□□ -0.84
USF1-205ENST00000473969 RNASE8Q8TDE3 154 aaKnown RBP9.82□□□□□ -0.84
USF1-205ENST00000473969 HIST1H2BAQ96A08 127 aa9.82□□□□□ -0.84
USF1-205ENST00000473969 SGK494Q96LW2 274 aa9.82□□□□□ -0.84
USF1-205ENST00000473969 LINC00467Q9BRT7 94 aa9.82□□□□□ -0.84
USF1-205ENST00000473969 PSG8Q9UQ74 426 aa9.82□□□□□ -0.84
USF1-205ENST00000473969 TRAV21A0A0B4J279 112 aa9.81□□□□□ -0.84
USF1-205ENST00000473969 PEX7O00628 323 aa9.81□□□□□ -0.84
USF1-205ENST00000473969 FLI1Q01543 452 aaPredicted RBP9.81□□□□□ -0.84
USF1-205ENST00000473969 ANXA2RQ3ZCQ2 193 aa9.81□□□□□ -0.84
USF1-205ENST00000473969 SAPCD1Q5SSQ6 148 aa9.81□□□□□ -0.84
USF1-205ENST00000473969 PRR9Q5T870 116 aa9.81□□□□□ -0.84
USF1-205ENST00000473969 FAM159AQ6UWV7 190 aa9.81□□□□□ -0.84
USF1-205ENST00000473969 PRNTQ86SH4 94 aa9.81□□□□□ -0.84
USF1-205ENST00000473969 C9orf62Q8N4C0 152 aa9.81□□□□□ -0.84
USF1-205ENST00000473969 TCEAL7Q9BRU2 100 aa9.81□□□□□ -0.84
USF1-205ENST00000473969 PLA2G2EQ9NZK7 142 aa9.81□□□□□ -0.84
USF1-205ENST00000473969 ARL2-SNX15V9GYD0 113 aa9.81□□□□□ -0.84
USF1-205ENST00000473969 LCE6AA0A183 80 aa9.8□□□□□ -0.84
USF1-205ENST00000473969 PAGE4O60829 102 aa9.8□□□□□ -0.84
USF1-205ENST00000473969 SULT1A2P50226 295 aa9.8□□□□□ -0.84
USF1-205ENST00000473969 Q6AWC8 147 aa9.8□□□□□ -0.84
USF1-205ENST00000473969 NAGKQ9UJ70 344 aa9.8□□□□□ -0.84
USF1-205ENST00000473969 PLAC8L1A1L4L8 177 aa9.79□□□□□ -0.84
USF1-205ENST00000473969 ATP5G1P05496 136 aa9.79□□□□□ -0.84
USF1-205ENST00000473969 ATP5G3P48201 142 aa9.79□□□□□ -0.84
USF1-205ENST00000473969 UBE2G1P62253 170 aa9.79□□□□□ -0.84
USF1-205ENST00000473969 SMUG1Q53HV7 270 aa9.79□□□□□ -0.84
USF1-205ENST00000473969 MUC21Q5SSG8 566 aa9.79□□□□□ -0.84
USF1-205ENST00000473969 GSN-AS1Q9NRJ2 163 aa9.79□□□□□ -0.84
USF1-205ENST00000473969 TRGV11A0A075B6L2 103 aa9.78□□□□□ -0.84
USF1-205ENST00000473969 IGHV4-4A0A075B6R2 117 aa9.78□□□□□ -0.84
USF1-205ENST00000473969 TRAV34A0A0B4J273 112 aa9.78□□□□□ -0.84
USF1-205ENST00000473969 LY6G6CO95867 125 aa9.78□□□□□ -0.84
USF1-205ENST00000473969 ZNF415Q09FC8 603 aa9.78□□□□□ -0.84
USF1-205ENST00000473969 DAZ2Q13117 558 aaKnown RBP9.78□□□□□ -0.84
USF1-205ENST00000473969 IBA57Q5T440 356 aaKnown RBP9.78□□□□□ -0.84
USF1-205ENST00000473969 FAM210BQ96KR6 192 aa9.78□□□□□ -0.84
USF1-205ENST00000473969 NDUFAF3Q9BU61 184 aa9.78□□□□□ -0.84
USF1-205ENST00000473969 GAGE12BA1L429 117 aa9.77□□□□□ -0.85
USF1-205ENST00000473969 GAGE7O76087 117 aa9.77□□□□□ -0.85
USF1-205ENST00000473969 IFNA1P01562 189 aa9.77□□□□□ -0.85
USF1-205ENST00000473969 GAGE12FP0CL80 117 aa9.77□□□□□ -0.85
USF1-205ENST00000473969 GAGE12GP0CL81 117 aa9.77□□□□□ -0.85
USF1-205ENST00000473969 GAGE12IP0CL82 117 aa9.77□□□□□ -0.85
USF1-205ENST00000473969 AKR1C3P42330 323 aa9.77□□□□□ -0.85
USF1-205ENST00000473969 TVP23CQ96ET8 276 aa9.77□□□□□ -0.85
USF1-205ENST00000473969 FMC1Q96HJ9 113 aa9.77□□□□□ -0.85
USF1-205ENST00000473969 KCNS1Q96KK3 526 aa9.77□□□□□ -0.85
USF1-205ENST00000473969 LINC00479Q96M42 142 aa9.77□□□□□ -0.85
USF1-205ENST00000473969 SDF2L1Q9HCN8 221 aa9.77□□□□□ -0.85
USF1-205ENST00000473969 MANBALQ9NQG1 85 aa9.77□□□□□ -0.85
USF1-205ENST00000473969 GNG13Q9P2W3 67 aa9.77□□□□□ -0.85
USF1-205ENST00000473969 TRGV2A0A075B6R0 118 aa9.76□□□□□ -0.85
USF1-205ENST00000473969 TRGV1A0A0A0MS02 117 aa9.76□□□□□ -0.85
USF1-205ENST00000473969 TRAV1-1A0A0B4J248 108 aa9.76□□□□□ -0.85
USF1-205ENST00000473969 F5H768 121 aa9.76□□□□□ -0.85
USF1-205ENST00000473969 GCGP01275 180 aa9.76□□□□□ -0.85
USF1-205ENST00000473969 IGLV2-11P01706 119 aa9.76□□□□□ -0.85
USF1-205ENST00000473969 S100A9P06702 114 aaKnown RBP9.76□□□□□ -0.85
USF1-205ENST00000473969 NKX2-5P52952 324 aaPredicted RBP9.76□□□□□ -0.85
USF1-205ENST00000473969 TCL1AP56279 114 aa9.76□□□□□ -0.85
USF1-205ENST00000473969 TMEM183BQ1AE95 376 aa9.76□□□□□ -0.85
USF1-205ENST00000473969 Q6ZQT7 251 aa9.76□□□□□ -0.85
USF1-205ENST00000473969 TMEM183AQ8IXX5 376 aa9.76□□□□□ -0.85
USF1-205ENST00000473969 C8orf49Q96NF6 230 aa9.76□□□□□ -0.85
USF1-205ENST00000473969 TP53TG3Q9ULZ0 132 aa9.76□□□□□ -0.85
USF1-205ENST00000473969 ZFP30Q9Y2G7 519 aa9.76□□□□□ -0.85
USF1-205ENST00000473969 PFN1P07737 140 aaKnown RBP9.75□□□□□ -0.85
USF1-205ENST00000473969 C11orf72Q8NBR9 251 aa9.75□□□□□ -0.85
USF1-205ENST00000473969 TXNDC17Q9BRA2 123 aa9.75□□□□□ -0.85
USF1-205ENST00000473969 APLNQ9ULZ1 77 aa9.75□□□□□ -0.85
USF1-205ENST00000473969 KLF12Q9Y4X4 402 aa9.75□□□□□ -0.85
USF1-205ENST00000473969 CSMD3Q7Z407 3707 aa9.74□□□□□ -0.85
USF1-205ENST00000473969 STARD9Q9P2P6 4700 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms