RNA–Protein interactions for RNA: ENST00000472729.1

COMMD1-208, Transcript of copper metabolism domain containing 1, human

TSL 3

Gene COMMD1, Length 629 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COMMD1-208	ENST00000472729	ZNF415	Q09FC8	603 aa		13.64	□□□□□ -0.23
COMMD1-208	ENST00000472729	IBA57	Q5T440	356 aa	Known RBP	13.64	□□□□□ -0.23
COMMD1-208	ENST00000472729	GOLT1A	Q6ZVE7	132 aa		13.64	□□□□□ -0.23
COMMD1-208	ENST00000472729	IQCF2	Q8IXL9	164 aa		13.64	□□□□□ -0.23
COMMD1-208	ENST00000472729	ACTR3C	Q9C0K3	210 aa	Predicted RBP	13.64	□□□□□ -0.23
COMMD1-208	ENST00000472729	ARL14EPL	P0DKL9	152 aa		13.63	□□□□□ -0.23
COMMD1-208	ENST00000472729	TCL1A	P56279	114 aa		13.63	□□□□□ -0.23
COMMD1-208	ENST00000472729	ARL6IP6	Q8N6S5	226 aa		13.63	□□□□□ -0.23
COMMD1-208	ENST00000472729	TMED6	Q8WW62	240 aa		13.63	□□□□□ -0.23
COMMD1-208	ENST00000472729	RAB24	Q969Q5	203 aa		13.63	□□□□□ -0.23
COMMD1-208	ENST00000472729	NDFIP1	Q9BT67	221 aa		13.63	□□□□□ -0.23
COMMD1-208	ENST00000472729	TMPRSS5	Q9H3S3	457 aa		13.63	□□□□□ -0.23
COMMD1-208	ENST00000472729	KLF12	Q9Y4X4	402 aa		13.63	□□□□□ -0.23
COMMD1-208	ENST00000472729		Q5BKY6	102 aa		13.62	□□□□□ -0.23
COMMD1-208	ENST00000472729	MUC21	Q5SSG8	566 aa		13.62	□□□□□ -0.23
COMMD1-208	ENST00000472729	C11orf72	Q8NBR9	251 aa		13.62	□□□□□ -0.23
COMMD1-208	ENST00000472729	TMEM167B	Q9NRX6	74 aa		13.62	□□□□□ -0.23
COMMD1-208	ENST00000472729	NAGK	Q9UJ70	344 aa		13.62	□□□□□ -0.23
COMMD1-208	ENST00000472729	TNFSF18	Q9UNG2	199 aa		13.62	□□□□□ -0.23
COMMD1-208	ENST00000472729	SERTM2	A0A1B0GWG4	89 aa		13.61	□□□□□ -0.23
COMMD1-208	ENST00000472729	CXorf1	O96002	111 aa		13.61	□□□□□ -0.23
COMMD1-208	ENST00000472729	STAG3L2	P0CL84	134 aa		13.61	□□□□□ -0.23
COMMD1-208	ENST00000472729	STAG3L3	P0CL85	134 aa		13.61	□□□□□ -0.23
COMMD1-208	ENST00000472729	PRR9	Q5T870	116 aa		13.61	□□□□□ -0.23
COMMD1-208	ENST00000472729	TP53TG3	Q9ULZ0	132 aa		13.61	□□□□□ -0.23
COMMD1-208	ENST00000472729	TRGV11	A0A075B6L2	103 aa		13.6	□□□□□ -0.23
COMMD1-208	ENST00000472729		H3BNG1	76 aa		13.6	□□□□□ -0.23
COMMD1-208	ENST00000472729	C1orf134	Q5TEV5	83 aa		13.6	□□□□□ -0.23
COMMD1-208	ENST00000472729	SSX7	Q7RTT5	188 aa		13.6	□□□□□ -0.23
COMMD1-208	ENST00000472729	ST6GAL2	Q96JF0	529 aa		13.6	□□□□□ -0.23
COMMD1-208	ENST00000472729	SH3BGRL3	Q9H299	93 aa		13.6	□□□□□ -0.23
COMMD1-208	ENST00000472729	TREM1	Q9NP99	234 aa		13.6	□□□□□ -0.23
COMMD1-208	ENST00000472729	PRSS29P	A6NIE9	313 aa		13.59	□□□□□ -0.23
COMMD1-208	ENST00000472729	SPINK4	O60575	86 aa		13.59	□□□□□ -0.23
COMMD1-208	ENST00000472729	HOXA5	P20719	270 aa		13.59	□□□□□ -0.23
COMMD1-208	ENST00000472729	GCHFR	P30047	84 aa		13.59	□□□□□ -0.23
COMMD1-208	ENST00000472729	RPL7L1	Q6DKI1	246 aa	Known RBP	13.59	□□□□□ -0.23
COMMD1-208	ENST00000472729	C18orf15	Q96N68	181 aa		13.59	□□□□□ -0.23
COMMD1-208	ENST00000472729	MRPL16	Q9NX20	251 aa	Known RBP	13.59	□□□□□ -0.23
COMMD1-208	ENST00000472729	VPS13D	Q5THJ4	4388 aa		13.58	□□□□□ -0.23
COMMD1-208	ENST00000472729	TRAV21	A0A0B4J279	112 aa		13.58	□□□□□ -0.24
COMMD1-208	ENST00000472729	TAAR5	O14804	337 aa		13.58	□□□□□ -0.24
COMMD1-208	ENST00000472729	SLA	Q13239	276 aa		13.58	□□□□□ -0.24
COMMD1-208	ENST00000472729	TMEM183B	Q1AE95	376 aa		13.58	□□□□□ -0.24
COMMD1-208	ENST00000472729	AKR1C8P	Q5T2L2	129 aa		13.58	□□□□□ -0.24
COMMD1-208	ENST00000472729		Q6AWC8	147 aa		13.58	□□□□□ -0.24
COMMD1-208	ENST00000472729	TMEM183A	Q8IXX5	376 aa		13.58	□□□□□ -0.24
COMMD1-208	ENST00000472729	C5orf17	Q8NAS9	161 aa		13.58	□□□□□ -0.24
COMMD1-208	ENST00000472729	ARPC5	O15511	151 aa		13.57	□□□□□ -0.24
COMMD1-208	ENST00000472729	IGHV3-53	P01767	116 aa		13.57	□□□□□ -0.24
COMMD1-208	ENST00000472729	GNG5	P63218	68 aa		13.57	□□□□□ -0.24
COMMD1-208	ENST00000472729	ZFP69	Q49AA0	526 aa		13.57	□□□□□ -0.24
COMMD1-208	ENST00000472729		Q6ZQT7	251 aa		13.57	□□□□□ -0.24
COMMD1-208	ENST00000472729	SPX	Q9BT56	116 aa		13.57	□□□□□ -0.24
COMMD1-208	ENST00000472729	LINC00588	Q9Y4M8	146 aa		13.57	□□□□□ -0.24
COMMD1-208	ENST00000472729	RNF222	A6NCQ9	220 aa		13.56	□□□□□ -0.24
COMMD1-208	ENST00000472729	PAX4	O43316	350 aa		13.56	□□□□□ -0.24
COMMD1-208	ENST00000472729	SUMO1	P63165	101 aa	Known RBP	13.56	□□□□□ -0.24
COMMD1-208	ENST00000472729		Q6ZR54	194 aa		13.56	□□□□□ -0.24
COMMD1-208	ENST00000472729	TRAV8-1	A0A0A6YYK1	113 aa		13.55	□□□□□ -0.24
COMMD1-208	ENST00000472729		F6UZH7	168 aa		13.55	□□□□□ -0.24
COMMD1-208	ENST00000472729	TCRA	P04437	139 aa		13.55	□□□□□ -0.24
COMMD1-208	ENST00000472729	ZNRF2	Q8NHG8	242 aa		13.55	□□□□□ -0.24
COMMD1-208	ENST00000472729	KCNS1	Q96KK3	526 aa		13.55	□□□□□ -0.24
COMMD1-208	ENST00000472729		Q9H8V8	135 aa		13.55	□□□□□ -0.24
COMMD1-208	ENST00000472729	SDF2L1	Q9HCN8	221 aa		13.55	□□□□□ -0.24
COMMD1-208	ENST00000472729	MDFIC	Q9P1T7	246 aa		13.55	□□□□□ -0.24
COMMD1-208	ENST00000472729	TRGV4	A0A0C4DH28	118 aa		13.54	□□□□□ -0.24
COMMD1-208	ENST00000472729	NBDY	A0A0U1RRE5	68 aa		13.54	□□□□□ -0.24
COMMD1-208	ENST00000472729	FBLL1	A6NHQ2	334 aa	Known RBP	13.54	□□□□□ -0.24
COMMD1-208	ENST00000472729	IFNA7	P01567	189 aa		13.54	□□□□□ -0.24
COMMD1-208	ENST00000472729	SGK494	Q96LW2	274 aa		13.54	□□□□□ -0.24
COMMD1-208	ENST00000472729	PRO0255	Q9UI72	69 aa		13.54	□□□□□ -0.24
COMMD1-208	ENST00000472729	EPDR1	Q9UM22	224 aa		13.54	□□□□□ -0.24
COMMD1-208	ENST00000472729	HHLA3	Q9XRX5	114 aa		13.54	□□□□□ -0.24
COMMD1-208	ENST00000472729	CTXND1	A0A1B0GTU2	59 aa		13.53	□□□□□ -0.24
COMMD1-208	ENST00000472729	RTL8C	O15255	209 aa		13.53	□□□□□ -0.24
COMMD1-208	ENST00000472729	PPT1	P50897	306 aa		13.53	□□□□□ -0.24
COMMD1-208	ENST00000472729	TTC32	Q5I0X7	151 aa		13.53	□□□□□ -0.24
COMMD1-208	ENST00000472729	ICOS	Q9Y6W8	199 aa		13.53	□□□□□ -0.24
COMMD1-208	ENST00000472729	TDRG1	Q3Y452	100 aa		13.52	□□□□□ -0.25
COMMD1-208	ENST00000472729	PRNT	Q86SH4	94 aa		13.52	□□□□□ -0.25
COMMD1-208	ENST00000472729	CYB561D1	Q8N8Q1	229 aa		13.52	□□□□□ -0.25
COMMD1-208	ENST00000472729	STOML3	Q8TAV4	291 aa		13.52	□□□□□ -0.25
COMMD1-208	ENST00000472729	SUN5	Q8TC36	379 aa		13.52	□□□□□ -0.25
COMMD1-208	ENST00000472729	PSG8	Q9UQ74	426 aa		13.52	□□□□□ -0.25
COMMD1-208	ENST00000472729		A0A1W2PRE2	83 aa		13.51	□□□□□ -0.25
COMMD1-208	ENST00000472729	FLI1	Q01543	452 aa	Predicted RBP	13.51	□□□□□ -0.25
COMMD1-208	ENST00000472729	SAPCD1	Q5SSQ6	148 aa		13.51	□□□□□ -0.25
COMMD1-208	ENST00000472729	PCNP	Q8WW12	178 aa	Known RBP	13.51	□□□□□ -0.25
COMMD1-208	ENST00000472729	C8orf49	Q96NF6	230 aa		13.51	□□□□□ -0.25
COMMD1-208	ENST00000472729	NKX6-2	Q9C056	277 aa	Predicted RBP	13.51	□□□□□ -0.25
COMMD1-208	ENST00000472729		M0R2P5	195 aa		13.5	□□□□□ -0.25
COMMD1-208	ENST00000472729	GNRH2	O43555	120 aa		13.5	□□□□□ -0.25
COMMD1-208	ENST00000472729	ESRG	Q1W209	222 aa		13.5	□□□□□ -0.25
COMMD1-208	ENST00000472729	SMUG1	Q53HV7	270 aa		13.5	□□□□□ -0.25
COMMD1-208	ENST00000472729	C6orf223	Q8N319	242 aa		13.5	□□□□□ -0.25
COMMD1-208	ENST00000472729	RASL10A	Q92737	203 aa		13.5	□□□□□ -0.25
COMMD1-208	ENST00000472729	VSIG2	Q96IQ7	327 aa		13.5	□□□□□ -0.25
COMMD1-208	ENST00000472729		A0A096LPF7	62 aa		13.49	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms