RNA–Protein interactions for RNA: ENST00000471697.1

SCN3A-207, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 4

Gene SCN3A, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-207ENST00000471697 RPP25LQ8N5L8 163 aaKnown RBP2.32□□□□□ -2.04
SCN3A-207ENST00000471697 TSKUQ8WUA8 353 aa2.32□□□□□ -2.04
SCN3A-207ENST00000471697 FGF13Q92913 245 aa2.32□□□□□ -2.04
SCN3A-207ENST00000471697 TRGV9Q99603 122 aa2.32□□□□□ -2.04
SCN3A-207ENST00000471697 B9D2Q9BPU9 175 aa2.32□□□□□ -2.04
SCN3A-207ENST00000471697 C8orf17Q9NRJ1 99 aa2.32□□□□□ -2.04
SCN3A-207ENST00000471697 CYTL1Q9NRR1 136 aa2.32□□□□□ -2.04
SCN3A-207ENST00000471697 HIGD1BQ9P298 99 aa2.32□□□□□ -2.04
SCN3A-207ENST00000471697 DEC1Q9P2X7 70 aa2.32□□□□□ -2.04
SCN3A-207ENST00000471697 KLK5Q9Y337 293 aaPredicted RBP2.32□□□□□ -2.04
SCN3A-207ENST00000471697 TSC2P49815 1807 aa2.32□□□□□ -2.04
SCN3A-207ENST00000471697 BRWD3Q6RI45 1802 aa2.32□□□□□ -2.04
SCN3A-207ENST00000471697 NYNRINQ9P2P1 1898 aaKnown RBP2.32□□□□□ -2.04
SCN3A-207ENST00000471697 DLG5Q8TDM6 1919 aa2.32□□□□□ -2.04
SCN3A-207ENST00000471697 DOCK11Q5JSL3 2073 aa2.32□□□□□ -2.04
SCN3A-207ENST00000471697 AHDC1Q5TGY3 1603 aaPredicted RBP2.31□□□□□ -2.04
SCN3A-207ENST00000471697 ARFGEF2Q9Y6D5 1785 aa2.31□□□□□ -2.04
SCN3A-207ENST00000471697 GBF1Q92538 1859 aa2.31□□□□□ -2.04
SCN3A-207ENST00000471697 PTPRBP23467 1997 aa2.31□□□□□ -2.04
SCN3A-207ENST00000471697 TRAV2A0A0B4J234 112 aa2.31□□□□□ -2.04
SCN3A-207ENST00000471697 IGHV7-4-1A0A0J9YVY3 117 aa2.31□□□□□ -2.04
SCN3A-207ENST00000471697 INS-IGF2F8WCM5 200 aa2.31□□□□□ -2.04
SCN3A-207ENST00000471697 C19orf84I3L1E1 186 aa2.31□□□□□ -2.04
SCN3A-207ENST00000471697 NDUFC1O43677 76 aa2.31□□□□□ -2.04
SCN3A-207ENST00000471697 C3orf79P0CE67 100 aa2.31□□□□□ -2.04
SCN3A-207ENST00000471697 INAFM2P0DMQ5 153 aa2.31□□□□□ -2.04
SCN3A-207ENST00000471697 ZNF80P51504 273 aaPredicted RBP2.31□□□□□ -2.04
SCN3A-207ENST00000471697 ZNF136P52737 540 aa2.31□□□□□ -2.04
SCN3A-207ENST00000471697 CCL20P78556 96 aa2.31□□□□□ -2.04
SCN3A-207ENST00000471697 ZNF791Q3KP31 576 aaPredicted RBP2.31□□□□□ -2.04
SCN3A-207ENST00000471697 RNASE13Q5GAN3 156 aaKnown RBP2.31□□□□□ -2.04
SCN3A-207ENST00000471697 CFAP126Q5VTH2 177 aa2.31□□□□□ -2.04
SCN3A-207ENST00000471697 SCXQ7RTU7 201 aa2.31□□□□□ -2.04
SCN3A-207ENST00000471697 SH2D6Q7Z4S9 175 aa2.31□□□□□ -2.04
SCN3A-207ENST00000471697 SERP2Q8N6R1 65 aa2.31□□□□□ -2.04
SCN3A-207ENST00000471697 CYB561D1Q8N8Q1 229 aa2.31□□□□□ -2.04
SCN3A-207ENST00000471697 FAM213BQ8TBF2 198 aa2.31□□□□□ -2.04
SCN3A-207ENST00000471697 STAG3L4Q8TBR4 150 aa2.31□□□□□ -2.04
SCN3A-207ENST00000471697 DCANP1Q8TF63 244 aa2.31□□□□□ -2.04
SCN3A-207ENST00000471697 H1FXQ92522 213 aaKnown RBP2.31□□□□□ -2.04
SCN3A-207ENST00000471697 RNASE6Q93091 150 aaKnown RBP2.31□□□□□ -2.04
SCN3A-207ENST00000471697 C1orf147Q96MC9 270 aaPredicted RBP2.31□□□□□ -2.04
SCN3A-207ENST00000471697 OR8B2Q96RD0 313 aa2.31□□□□□ -2.04
SCN3A-207ENST00000471697 AMELYQ99218 206 aa2.31□□□□□ -2.04
SCN3A-207ENST00000471697 HDHD3Q9BSH5 251 aaPredicted RBP2.31□□□□□ -2.04
SCN3A-207ENST00000471697 ZNF286AQ9HBT8 521 aa2.31□□□□□ -2.04
SCN3A-207ENST00000471697 ZNF835Q9Y2P0 537 aa2.31□□□□□ -2.04
SCN3A-207ENST00000471697 POLEQ07864 2286 aa2.31□□□□□ -2.04
SCN3A-207ENST00000471697 PTPRMP28827 1452 aa2.31□□□□□ -2.04
SCN3A-207ENST00000471697 NUP188Q5SRE5 1749 aa2.31□□□□□ -2.04
SCN3A-207ENST00000471697 FMN2Q9NZ56 1722 aa2.31□□□□□ -2.04
SCN3A-207ENST00000471697 TANC2Q9HCD6 1990 aa2.3□□□□□ -2.04
SCN3A-207ENST00000471697 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.3□□□□□ -2.04
SCN3A-207ENST00000471697 TRAV17A0A0B4J275 112 aa2.3□□□□□ -2.04
SCN3A-207ENST00000471697 IGHV5-10-1A0A0J9YXX1 117 aa2.3□□□□□ -2.04
SCN3A-207ENST00000471697 A0A1W2PPR1 153 aa2.3□□□□□ -2.04
SCN3A-207ENST00000471697 GRIFINA4D1Z8 144 aa2.3□□□□□ -2.04
SCN3A-207ENST00000471697 ZNF736B4DX44 427 aaPredicted RBP2.3□□□□□ -2.04
SCN3A-207ENST00000471697 SLC25A14O95258 325 aaPredicted RBP2.3□□□□□ -2.04
SCN3A-207ENST00000471697 TCL1BO95988 128 aa2.3□□□□□ -2.04
SCN3A-207ENST00000471697 HBDP02042 147 aa2.3□□□□□ -2.04
SCN3A-207ENST00000471697 CXCL8P10145 99 aa2.3□□□□□ -2.04
SCN3A-207ENST00000471697 ZNF32P17041 273 aa2.3□□□□□ -2.04
SCN3A-207ENST00000471697 S100A4P26447 101 aaKnown RBP2.3□□□□□ -2.04
SCN3A-207ENST00000471697 SNRPGP62308 76 aaKnown RBP2.3□□□□□ -2.04
SCN3A-207ENST00000471697 MIC13Q5XKP0 118 aa2.3□□□□□ -2.04
SCN3A-207ENST00000471697 Q6P435 159 aa2.3□□□□□ -2.04
SCN3A-207ENST00000471697 CYP2G1PQ6ZSU1 146 aa2.3□□□□□ -2.04
SCN3A-207ENST00000471697 C5orf38Q86SI9 138 aa2.3□□□□□ -2.04
SCN3A-207ENST00000471697 ZNF329Q86UD4 541 aa2.3□□□□□ -2.04
SCN3A-207ENST00000471697 TMEM256Q8N2U0 113 aa2.3□□□□□ -2.04
SCN3A-207ENST00000471697 Q8N377 158 aa2.3□□□□□ -2.04
SCN3A-207ENST00000471697 POM121L12Q8N7R1 296 aa2.3□□□□□ -2.04
SCN3A-207ENST00000471697 C20orf203Q8NBC4 194 aa2.3□□□□□ -2.04
SCN3A-207ENST00000471697 MORN4Q8NDC4 146 aa2.3□□□□□ -2.04
SCN3A-207ENST00000471697 PPP1R1CQ8WVI7 109 aa2.3□□□□□ -2.04
SCN3A-207ENST00000471697 ZNF414Q96IQ9 312 aa2.3□□□□□ -2.04
SCN3A-207ENST00000471697 LITAFQ99732 161 aa2.3□□□□□ -2.04
SCN3A-207ENST00000471697 RPP21Q9H633 154 aaKnown RBP2.3□□□□□ -2.04
SCN3A-207ENST00000471697 LSM2Q9Y333 95 aaKnown RBP2.3□□□□□ -2.04
SCN3A-207ENST00000471697 TET3O43151 1660 aa2.3□□□□□ -2.04
SCN3A-207ENST00000471697 PLCH1Q4KWH8 1693 aa2.3□□□□□ -2.04
SCN3A-207ENST00000471697 QSER1Q2KHR3 1735 aa2.3□□□□□ -2.04
SCN3A-207ENST00000471697 TDRD6O60522 2096 aaKnown RBP2.3□□□□□ -2.04
SCN3A-207ENST00000471697 NWD2Q9ULI1 1742 aa2.29□□□□□ -2.04
SCN3A-207ENST00000471697 TULP4Q9NRJ4 1543 aa2.29□□□□□ -2.04
SCN3A-207ENST00000471697 IGHV1-24A0A0C4DH33 117 aa2.29□□□□□ -2.04
SCN3A-207ENST00000471697 IGHV5-51A0A0C4DH38 117 aa2.29□□□□□ -2.04
SCN3A-207ENST00000471697 A0A0D9SEW6 157 aa2.29□□□□□ -2.04
SCN3A-207ENST00000471697 MDFIC2A0A1B0GVS7 189 aa2.29□□□□□ -2.04
SCN3A-207ENST00000471697 A0A1B0GVX0 72 aa2.29□□□□□ -2.04
SCN3A-207ENST00000471697 BUB1B-PAK6H3BSN5 160 aa2.29□□□□□ -2.04
SCN3A-207ENST00000471697 K7EM74 188 aa2.29□□□□□ -2.04
SCN3A-207ENST00000471697 BPY2O14599 106 aa2.29□□□□□ -2.04
SCN3A-207ENST00000471697 PCBD1P61457 104 aa2.29□□□□□ -2.04
SCN3A-207ENST00000471697 LYZP61626 148 aa2.29□□□□□ -2.04
SCN3A-207ENST00000471697 UBE2BP63146 152 aa2.29□□□□□ -2.04
SCN3A-207ENST00000471697 BSPH1Q075Z2 132 aa2.29□□□□□ -2.04
SCN3A-207ENST00000471697 SP6Q3SY56 376 aa2.29□□□□□ -2.04
SCN3A-207ENST00000471697 TMEM170BQ5T4T1 132 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms