RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 BTN1A1Q13410 526 aa6.2□□□□□ -1.42
CPSF4-211ENST00000471455 CNPY1Q3B7I2 92 aa6.2□□□□□ -1.42
CPSF4-211ENST00000471455 MORN5Q5VZ52 161 aa6.2□□□□□ -1.42
CPSF4-211ENST00000471455 NRARPQ7Z6K4 114 aa6.2□□□□□ -1.42
CPSF4-211ENST00000471455 TXNDC17Q9BRA2 123 aa6.2□□□□□ -1.42
CPSF4-211ENST00000471455 TMEM70Q9BUB7 260 aa6.2□□□□□ -1.42
CPSF4-211ENST00000471455 SRRQ9GZT4 340 aa6.2□□□□□ -1.42
CPSF4-211ENST00000471455 UQCC1Q9NVA1 299 aa6.2□□□□□ -1.42
CPSF4-211ENST00000471455 TMEM14CQ9P0S9 112 aa6.2□□□□□ -1.42
CPSF4-211ENST00000471455 KLF12Q9Y4X4 402 aa6.2□□□□□ -1.42
CPSF4-211ENST00000471455 IGHV1OR15-1A0A075B7D0 117 aa6.19□□□□□ -1.42
CPSF4-211ENST00000471455 TRBV7-9A0A0J9YWB2 115 aa6.19□□□□□ -1.42
CPSF4-211ENST00000471455 C7orf66A4D0T2 115 aa6.19□□□□□ -1.42
CPSF4-211ENST00000471455 M0R3E3 92 aa6.19□□□□□ -1.42
CPSF4-211ENST00000471455 PSCAO43653 123 aa6.19□□□□□ -1.42
CPSF4-211ENST00000471455 RPL29P47914 159 aaKnown RBP6.19□□□□□ -1.42
CPSF4-211ENST00000471455 HBG1P69891 147 aa6.19□□□□□ -1.42
CPSF4-211ENST00000471455 HBG2P69892 147 aa6.19□□□□□ -1.42
CPSF4-211ENST00000471455 BAXQ07812 192 aa6.19□□□□□ -1.42
CPSF4-211ENST00000471455 CD300CQ08708 224 aa6.19□□□□□ -1.42
CPSF4-211ENST00000471455 ARL16Q0P5N6 197 aa6.19□□□□□ -1.42
CPSF4-211ENST00000471455 ERCC8Q13216 396 aa6.19□□□□□ -1.42
CPSF4-211ENST00000471455 C21orf62-AS1Q17RA5 79 aa6.19□□□□□ -1.42
CPSF4-211ENST00000471455 MIC13Q5XKP0 118 aa6.19□□□□□ -1.42
CPSF4-211ENST00000471455 C9orf47Q6ZRZ4 202 aa6.19□□□□□ -1.42
CPSF4-211ENST00000471455 SH2D6Q7Z4S9 175 aa6.19□□□□□ -1.42
CPSF4-211ENST00000471455 STX12Q86Y82 276 aa6.19□□□□□ -1.42
CPSF4-211ENST00000471455 MITD1Q8WV92 249 aa6.19□□□□□ -1.42
CPSF4-211ENST00000471455 FAM19A4Q96LR4 140 aa6.19□□□□□ -1.42
CPSF4-211ENST00000471455 SLC39A9Q9NUM3 307 aa6.19□□□□□ -1.42
CPSF4-211ENST00000471455 MRPL16Q9NX20 251 aaKnown RBP6.19□□□□□ -1.42
CPSF4-211ENST00000471455 WDR83OSQ9Y284 106 aa6.19□□□□□ -1.42
CPSF4-211ENST00000471455 FAT1Q14517 4588 aa6.18□□□□□ -1.42
CPSF4-211ENST00000471455 IGLV5-52A0A0A0MRZ9 124 aa6.18□□□□□ -1.42
CPSF4-211ENST00000471455 TRAV5A0A0B4J249 113 aa6.18□□□□□ -1.42
CPSF4-211ENST00000471455 C9JCJ5 164 aa6.18□□□□□ -1.42
CPSF4-211ENST00000471455 PRAF2O60831 178 aa6.18□□□□□ -1.42
CPSF4-211ENST00000471455 MBPP02686 304 aaPredicted RBP6.18□□□□□ -1.42
CPSF4-211ENST00000471455 CRYGDP07320 174 aa6.18□□□□□ -1.42
CPSF4-211ENST00000471455 FUSP35637 526 aaKnown RBP eCLIP6.18□□□□□ -1.42
CPSF4-211ENST00000471455 FHL2Q14192 279 aa6.18□□□□□ -1.42
CPSF4-211ENST00000471455 MRPL32Q9BYC8 188 aaKnown RBP6.18□□□□□ -1.42
CPSF4-211ENST00000471455 AGPAT4-IT1Q9H0P7 198 aa6.18□□□□□ -1.42
CPSF4-211ENST00000471455 GPN1Q9HCN4 374 aaPredicted RBP6.18□□□□□ -1.42
CPSF4-211ENST00000471455 LSM5Q9Y4Y9 91 aaKnown RBP6.18□□□□□ -1.42
CPSF4-211ENST00000471455 TRGV11A0A075B6L2 103 aa6.17□□□□□ -1.42
CPSF4-211ENST00000471455 UBE2L5PA0A1B0GUS4 154 aa6.17□□□□□ -1.42
CPSF4-211ENST00000471455 CCDC160A6NGH7 325 aa6.17□□□□□ -1.42
CPSF4-211ENST00000471455 E5RGE8 158 aa6.17□□□□□ -1.42
CPSF4-211ENST00000471455 K7EQD1 137 aa6.17□□□□□ -1.42
CPSF4-211ENST00000471455 CST7O76096 145 aa6.17□□□□□ -1.42
CPSF4-211ENST00000471455 SMR3BP02814 79 aaPredicted RBP6.17□□□□□ -1.42
CPSF4-211ENST00000471455 GYPEP15421 78 aa6.17□□□□□ -1.42
CPSF4-211ENST00000471455 S100A11P31949 105 aa6.17□□□□□ -1.42
CPSF4-211ENST00000471455 CSN1S1P47710 185 aa6.17□□□□□ -1.42
CPSF4-211ENST00000471455 SULT1A1P50225 295 aa6.17□□□□□ -1.42
CPSF4-211ENST00000471455 VWC2Q2TAL6 325 aa6.17□□□□□ -1.42
CPSF4-211ENST00000471455 IQCF2Q8IXL9 164 aa6.17□□□□□ -1.42
CPSF4-211ENST00000471455 OR10G4Q8NGN3 311 aa6.17□□□□□ -1.42
CPSF4-211ENST00000471455 CHAC2Q8WUX2 184 aa6.17□□□□□ -1.42
CPSF4-211ENST00000471455 BLNKQ8WV28 456 aa6.17□□□□□ -1.42
CPSF4-211ENST00000471455 SPXQ9BT56 116 aa6.17□□□□□ -1.42
CPSF4-211ENST00000471455 KCNIP2Q9NS61 270 aa6.17□□□□□ -1.42
CPSF4-211ENST00000471455 FLVCR2Q9UPI3 526 aa6.17□□□□□ -1.42
CPSF4-211ENST00000471455 TNFRSF18Q9Y5U5 241 aa6.17□□□□□ -1.42
CPSF4-211ENST00000471455 MYCBP2O75592 4640 aa6.16□□□□□ -1.42
CPSF4-211ENST00000471455 IGKV2-40A0A087WW87 121 aaPredicted RBP6.16□□□□□ -1.42
CPSF4-211ENST00000471455 FAM25EA8MYX2 175 aa6.16□□□□□ -1.42
CPSF4-211ENST00000471455 NDUFB4O95168 129 aa6.16□□□□□ -1.42
CPSF4-211ENST00000471455 IGKV2D-40P01614 121 aaPredicted RBP6.16□□□□□ -1.42
CPSF4-211ENST00000471455 FGF7P21781 194 aa6.16□□□□□ -1.42
CPSF4-211ENST00000471455 PPT1P50897 306 aa6.16□□□□□ -1.42
CPSF4-211ENST00000471455 ZNF138P52744 262 aa6.16□□□□□ -1.42
CPSF4-211ENST00000471455 ATP6V1FQ16864 119 aa6.16□□□□□ -1.42
CPSF4-211ENST00000471455 FAM122CQ6P4D5 195 aa6.16□□□□□ -1.42
CPSF4-211ENST00000471455 WFDC10BQ8IUB3 73 aa6.16□□□□□ -1.42
CPSF4-211ENST00000471455 EXOC3-AS1Q8N2X6 119 aa6.16□□□□□ -1.42
CPSF4-211ENST00000471455 ZFAND2AQ8N6M9 145 aa6.16□□□□□ -1.42
CPSF4-211ENST00000471455 LYRM2Q9NU23 88 aaPredicted RBP6.16□□□□□ -1.42
CPSF4-211ENST00000471455 ZNF492Q9P255 531 aa6.16□□□□□ -1.42
CPSF4-211ENST00000471455 VPS13BQ7Z7G8 4022 aa6.16□□□□□ -1.42
CPSF4-211ENST00000471455 C5orf51A6NDU8 294 aa6.15□□□□□ -1.42
CPSF4-211ENST00000471455 C1QBP02746 253 aa6.15□□□□□ -1.42
CPSF4-211ENST00000471455 PYYP10082 97 aa6.15□□□□□ -1.42
CPSF4-211ENST00000471455 TIRAPP58753 221 aa6.15□□□□□ -1.42
CPSF4-211ENST00000471455 S100A10P60903 97 aa6.15□□□□□ -1.42
CPSF4-211ENST00000471455 FAM159AQ6UWV7 190 aa6.15□□□□□ -1.42
CPSF4-211ENST00000471455 RASL10AQ92737 203 aa6.15□□□□□ -1.42
CPSF4-211ENST00000471455 SLC25A31Q9H0C2 315 aa6.15□□□□□ -1.42
CPSF4-211ENST00000471455 MDFICQ9P1T7 246 aa6.15□□□□□ -1.42
CPSF4-211ENST00000471455 TP53TG3Q9ULZ0 132 aa6.15□□□□□ -1.42
CPSF4-211ENST00000471455 TRAV8-6A0A0B4J262 113 aa6.14□□□□□ -1.43
CPSF4-211ENST00000471455 TRAV4A0A0B4J268 109 aa6.14□□□□□ -1.43
CPSF4-211ENST00000471455 IGHV3-38A0A0C4DH36 116 aa6.14□□□□□ -1.43
CPSF4-211ENST00000471455 RBAKDNA6NC62 111 aa6.14□□□□□ -1.43
CPSF4-211ENST00000471455 FAM24AA6NFZ4 105 aa6.14□□□□□ -1.43
CPSF4-211ENST00000471455 CCSO14618 274 aa6.14□□□□□ -1.43
CPSF4-211ENST00000471455 NBEAP1P0C6P0 100 aa6.14□□□□□ -1.43
CPSF4-211ENST00000471455 ZNF266Q14584 549 aa6.14□□□□□ -1.43
CPSF4-211ENST00000471455 LINC01556Q5JQF7 62 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms