RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 SCGB1C1Q8TD33 95 aa3.31□□□□□ -1.88
CCDC39-202ENST00000471307 USMG5Q96IX5 58 aa3.31□□□□□ -1.88
CCDC39-202ENST00000471307 TMEM147Q9BVK8 224 aa3.31□□□□□ -1.88
CCDC39-202ENST00000471307 PARD6GQ9BYG4 376 aaPredicted RBP3.31□□□□□ -1.88
CCDC39-202ENST00000471307 C16orf95Q9H693 158 aa3.31□□□□□ -1.88
CCDC39-202ENST00000471307 SLC25A22Q9H936 323 aa3.31□□□□□ -1.88
CCDC39-202ENST00000471307 NPVFQ9HCQ7 196 aa3.31□□□□□ -1.88
CCDC39-202ENST00000471307 UQCC1Q9NVA1 299 aa3.31□□□□□ -1.88
CCDC39-202ENST00000471307 TEP1Q99973 2627 aaKnown RBP3.31□□□□□ -1.88
CCDC39-202ENST00000471307 SETD2Q9BYW2 2564 aaPredicted RBP3.3□□□□□ -1.88
CCDC39-202ENST00000471307 JMJD1CQ15652 2540 aa3.3□□□□□ -1.88
CCDC39-202ENST00000471307 TRAV30A0A087WSZ9 112 aa3.3□□□□□ -1.88
CCDC39-202ENST00000471307 TRBV7-1A0A0A6YYK4 115 aa3.3□□□□□ -1.88
CCDC39-202ENST00000471307 A0A0G2JLM5 398 aa3.3□□□□□ -1.88
CCDC39-202ENST00000471307 PSMB11A5LHX3 300 aa3.3□□□□□ -1.88
CCDC39-202ENST00000471307 FAM223BA6NKX1 122 aa3.3□□□□□ -1.88
CCDC39-202ENST00000471307 SEC14L6B5MCN3 397 aa3.3□□□□□ -1.88
CCDC39-202ENST00000471307 I3L2K1 104 aa3.3□□□□□ -1.88
CCDC39-202ENST00000471307 MT-CO2P00403 227 aa3.3□□□□□ -1.88
CCDC39-202ENST00000471307 TPT1P13693 172 aaKnown RBP3.3□□□□□ -1.88
CCDC39-202ENST00000471307 RAB5AP20339 215 aa3.3□□□□□ -1.88
CCDC39-202ENST00000471307 OPRK1P41145 380 aa3.3□□□□□ -1.88
CCDC39-202ENST00000471307 KRTAP10-10P60014 251 aa3.3□□□□□ -1.88
CCDC39-202ENST00000471307 EGFEM1PQ0D2K5 195 aa3.3□□□□□ -1.88
CCDC39-202ENST00000471307 RPL7L1Q6DKI1 246 aaKnown RBP3.3□□□□□ -1.88
CCDC39-202ENST00000471307 EIF5AL1Q6IS14 154 aaKnown RBP3.3□□□□□ -1.88
CCDC39-202ENST00000471307 TMEM144Q7Z5S9 345 aa3.3□□□□□ -1.88
CCDC39-202ENST00000471307 FAM223AQ8IWN6 122 aa3.3□□□□□ -1.88
CCDC39-202ENST00000471307 BAP18Q8IXM2 172 aa3.3□□□□□ -1.88
CCDC39-202ENST00000471307 OR4X1Q8NH49 305 aa3.3□□□□□ -1.88
CCDC39-202ENST00000471307 STOML3Q8TAV4 291 aa3.3□□□□□ -1.88
CCDC39-202ENST00000471307 CHCHD10Q8WYQ3 142 aaPredicted RBP3.3□□□□□ -1.88
CCDC39-202ENST00000471307 GNPNAT1Q96EK6 184 aaPredicted RBP3.3□□□□□ -1.88
CCDC39-202ENST00000471307 ZNF471Q9BX82 626 aaPredicted RBP3.3□□□□□ -1.88
CCDC39-202ENST00000471307 SMIM3Q9BZL3 60 aa3.3□□□□□ -1.88
CCDC39-202ENST00000471307 ARV1Q9H2C2 271 aa3.3□□□□□ -1.88
CCDC39-202ENST00000471307 WFDC1Q9HC57 220 aa3.3□□□□□ -1.88
CCDC39-202ENST00000471307 ZNF355PQ9NSJ1 428 aa3.3□□□□□ -1.88
CCDC39-202ENST00000471307 LINC00527Q9UJ94 153 aa3.3□□□□□ -1.88
CCDC39-202ENST00000471307 ZFHX3Q15911 3703 aa3.3□□□□□ -1.88
CCDC39-202ENST00000471307 C2CD3Q4AC94 2353 aa3.29□□□□□ -1.88
CCDC39-202ENST00000471307 A6NDN8 102 aa3.29□□□□□ -1.88
CCDC39-202ENST00000471307 C17orf112F2Z3M2 114 aa3.29□□□□□ -1.88
CCDC39-202ENST00000471307 K7EIM0 57 aa3.29□□□□□ -1.88
CCDC39-202ENST00000471307 NUPL2O15504 423 aaKnown RBP3.29□□□□□ -1.88
CCDC39-202ENST00000471307 GATCO43716 136 aaKnown RBP3.29□□□□□ -1.88
CCDC39-202ENST00000471307 CFDP00746 253 aaPredicted RBP3.29□□□□□ -1.88
CCDC39-202ENST00000471307 IFNA7P01567 189 aa3.29□□□□□ -1.88
CCDC39-202ENST00000471307 PRH1P02810 166 aa3.29□□□□□ -1.88
CCDC39-202ENST00000471307 TRGV3P03979 118 aa3.29□□□□□ -1.88
CCDC39-202ENST00000471307 FABP1P07148 127 aa3.29□□□□□ -1.88
CCDC39-202ENST00000471307 SEC11BP0C7V7 166 aa3.29□□□□□ -1.88
CCDC39-202ENST00000471307 PSMB8P28062 276 aa3.29□□□□□ -1.88
CCDC39-202ENST00000471307 LINC00315P59091 139 aa3.29□□□□□ -1.88
CCDC39-202ENST00000471307 RHOGP84095 191 aa3.29□□□□□ -1.88
CCDC39-202ENST00000471307 SERF2P84101 59 aa3.29□□□□□ -1.88
CCDC39-202ENST00000471307 AKR1C1Q04828 323 aa3.29□□□□□ -1.88
CCDC39-202ENST00000471307 ATP5G2Q06055 141 aa3.29□□□□□ -1.88
CCDC39-202ENST00000471307 SLC16A13Q7RTY0 426 aa3.29□□□□□ -1.88
CCDC39-202ENST00000471307 MRPL55Q7Z7F7 128 aaKnown RBP3.29□□□□□ -1.88
CCDC39-202ENST00000471307 ZNF709Q8N972 641 aa3.29□□□□□ -1.88
CCDC39-202ENST00000471307 ACY3Q96HD9 319 aa3.29□□□□□ -1.88
CCDC39-202ENST00000471307 GINS3Q9BRX5 216 aa3.29□□□□□ -1.88
CCDC39-202ENST00000471307 PSMG3Q9BT73 122 aaPredicted RBP3.29□□□□□ -1.88
CCDC39-202ENST00000471307 WDR61Q9GZS3 305 aaKnown RBP3.29□□□□□ -1.88
CCDC39-202ENST00000471307 KCNIP2Q9NS61 270 aa3.29□□□□□ -1.88
CCDC39-202ENST00000471307 C21orf62Q9NYP8 219 aa3.29□□□□□ -1.88
CCDC39-202ENST00000471307 TIMM9Q9Y5J7 89 aa3.29□□□□□ -1.88
CCDC39-202ENST00000471307 IGKV1OR2-108A0A075B7D4 117 aa3.28□□□□□ -1.88
CCDC39-202ENST00000471307 UBE2L5PA0A1B0GUS4 154 aa3.28□□□□□ -1.88
CCDC39-202ENST00000471307 TCRBV4S1A1TA0A5B7 111 aa3.28□□□□□ -1.88
CCDC39-202ENST00000471307 CLPSL1A2RUU4 121 aa3.28□□□□□ -1.88
CCDC39-202ENST00000471307 UMAD1C9J7I0 102 aa3.28□□□□□ -1.88
CCDC39-202ENST00000471307 GNG7O60262 68 aa3.28□□□□□ -1.88
CCDC39-202ENST00000471307 CTSGP08311 255 aa3.28□□□□□ -1.88
CCDC39-202ENST00000471307 FGF7P21781 194 aa3.28□□□□□ -1.88
CCDC39-202ENST00000471307 ATP6V0CP27449 155 aa3.28□□□□□ -1.88
CCDC39-202ENST00000471307 OR10J1P30954 320 aa3.28□□□□□ -1.88
CCDC39-202ENST00000471307 RAB5CP51148 216 aa3.28□□□□□ -1.88
CCDC39-202ENST00000471307 RND2P52198 227 aa3.28□□□□□ -1.88
CCDC39-202ENST00000471307 TPPP2P59282 170 aa3.28□□□□□ -1.88
CCDC39-202ENST00000471307 YPEL3P61236 119 aaPredicted RBP3.28□□□□□ -1.88
CCDC39-202ENST00000471307 NUTF2P61970 127 aaKnown RBP3.28□□□□□ -1.88
CCDC39-202ENST00000471307 TEX261Q6UWH6 196 aa3.28□□□□□ -1.88
CCDC39-202ENST00000471307 ZNF767PQ75MW2 155 aa3.28□□□□□ -1.88
CCDC39-202ENST00000471307 HSD17B11Q8NBQ5 300 aa3.28□□□□□ -1.88
CCDC39-202ENST00000471307 ZNF680Q8NEM1 530 aa3.28□□□□□ -1.88
CCDC39-202ENST00000471307 OR2G3Q8NGZ4 309 aa3.28□□□□□ -1.88
CCDC39-202ENST00000471307 MYOZ3Q8TDC0 251 aa3.28□□□□□ -1.88
CCDC39-202ENST00000471307 BAALCQ8WXS3 180 aa3.28□□□□□ -1.88
CCDC39-202ENST00000471307 UBE2E2Q96LR5 201 aa3.28□□□□□ -1.88
CCDC39-202ENST00000471307 TRGV9Q99603 122 aa3.28□□□□□ -1.88
CCDC39-202ENST00000471307 NPCDR1Q9BY65 106 aa3.28□□□□□ -1.88
CCDC39-202ENST00000471307 IGKV1D-37A0A075B6S9 117 aa3.27□□□□□ -1.89
CCDC39-202ENST00000471307 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.27□□□□□ -1.89
CCDC39-202ENST00000471307 IGHV3-21A0A0B4J1V1 117 aa3.27□□□□□ -1.89
CCDC39-202ENST00000471307 IGKV1-17P01599 117 aa3.27□□□□□ -1.89
CCDC39-202ENST00000471307 IGHV3-48P01763 117 aa3.27□□□□□ -1.89
CCDC39-202ENST00000471307 LINC00869P0C866 280 aa3.27□□□□□ -1.89
CCDC39-202ENST00000471307 IGLC1P0CG04 106 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms