RNA–Protein interactions for RNA: ENST00000470356.3

HMG20B-209, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 806 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-209ENST00000470356 FFAR4Q5NUL3 377 aa21.61■■□□□ 1.05
HMG20B-209ENST00000470356 Q8TAT8 98 aa21.61■■□□□ 1.05
HMG20B-209ENST00000470356 ST6GAL2Q96JF0 529 aa21.61■■□□□ 1.05
HMG20B-209ENST00000470356 SSNA1O43805 119 aa21.6■■□□□ 1.05
HMG20B-209ENST00000470356 ARPC5LQ9BPX5 153 aa21.6■■□□□ 1.05
HMG20B-209ENST00000470356 UBE2L3P68036 154 aaKnown RBP21.59■■□□□ 1.05
HMG20B-209ENST00000470356 SCGB1C1Q8TD33 95 aa21.59■■□□□ 1.05
HMG20B-209ENST00000470356 IFNA5P01569 189 aa21.58■■□□□ 1.05
HMG20B-209ENST00000470356 RPL12P30050 165 aaKnown RBP21.58■■□□□ 1.05
HMG20B-209ENST00000470356 DEFA1P59665 94 aa21.58■■□□□ 1.05
HMG20B-209ENST00000470356 DEFA3P59666 94 aa21.58■■□□□ 1.05
HMG20B-209ENST00000470356 ZNF266Q14584 549 aa21.58■■□□□ 1.05
HMG20B-209ENST00000470356 BTF3P20290 206 aaKnown RBP21.57■■□□□ 1.04
HMG20B-209ENST00000470356 TAS2R45P59539 299 aa21.57■■□□□ 1.04
HMG20B-209ENST00000470356 KHDC3LQ587J8 217 aa21.57■■□□□ 1.04
HMG20B-209ENST00000470356 MRPL16Q9NX20 251 aaKnown RBP21.57■■□□□ 1.04
HMG20B-209ENST00000470356 PAX4O43316 350 aa21.56■■□□□ 1.04
HMG20B-209ENST00000470356 SMIM3Q9BZL3 60 aa21.56■■□□□ 1.04
HMG20B-209ENST00000470356 LENEPQ9Y5L5 61 aa21.55■■□□□ 1.04
HMG20B-209ENST00000470356 DIRC3C9JPN6 131 aa21.54■■□□□ 1.04
HMG20B-209ENST00000470356 ZNF415Q09FC8 603 aa21.54■■□□□ 1.04
HMG20B-209ENST00000470356 SLAQ13239 276 aa21.54■■□□□ 1.04
HMG20B-209ENST00000470356 MBD2Q9UBB5 411 aa21.54■■□□□ 1.04
HMG20B-209ENST00000470356 PRO0255Q9UI72 69 aa21.54■■□□□ 1.04
HMG20B-209ENST00000470356 ICOSQ9Y6W8 199 aa21.54■■□□□ 1.04
HMG20B-209ENST00000470356 IGHV3-53P01767 116 aa21.53■■□□□ 1.04
HMG20B-209ENST00000470356 CDK2AP2O75956 126 aa21.52■■□□□ 1.04
HMG20B-209ENST00000470356 MUC21Q5SSG8 566 aa21.52■■□□□ 1.04
HMG20B-209ENST00000470356 HHLA3Q9XRX5 114 aa21.52■■□□□ 1.04
HMG20B-209ENST00000470356 HSPG2P98160 4391 aa21.52■■□□□ 1.04
HMG20B-209ENST00000470356 FHL2Q14192 279 aa21.51■■□□□ 1.03
HMG20B-209ENST00000470356 Q6AWC8 147 aa21.51■■□□□ 1.03
HMG20B-209ENST00000470356 TMED6Q8WW62 240 aa21.51■■□□□ 1.03
HMG20B-209ENST00000470356 WFDC1Q9HC57 220 aa21.51■■□□□ 1.03
HMG20B-209ENST00000470356 CRYBA4P53673 196 aa21.5■■□□□ 1.03
HMG20B-209ENST00000470356 SPATA12Q7Z6I5 190 aa21.5■■□□□ 1.03
HMG20B-209ENST00000470356 OTORQ9NRC9 128 aa21.5■■□□□ 1.03
HMG20B-209ENST00000470356 MDFICQ9P1T7 246 aa21.5■■□□□ 1.03
HMG20B-209ENST00000470356 LRP1BQ9NZR2 4599 aa21.5■■□□□ 1.03
HMG20B-209ENST00000470356 SIVA1O15304 175 aa21.49■■□□□ 1.03
HMG20B-209ENST00000470356 HYLS1Q96M11 299 aa21.49■■□□□ 1.03
HMG20B-209ENST00000470356 ACOT6Q3I5F7 207 aaPredicted RBP21.48■■□□□ 1.03
HMG20B-209ENST00000470356 C8orf49Q96NF6 230 aa21.48■■□□□ 1.03
HMG20B-209ENST00000470356 PGPA6NDG6 321 aa21.47■■□□□ 1.03
HMG20B-209ENST00000470356 EIF3GO75821 320 aaKnown RBP eCLIP21.47■■□□□ 1.03
HMG20B-209ENST00000470356 MRPL23Q16540 153 aaKnown RBP21.47■■□□□ 1.03
HMG20B-209ENST00000470356 FAM159AQ6UWV7 190 aa21.47■■□□□ 1.03
HMG20B-209ENST00000470356 PQLC2Q6ZP29 291 aa21.47■■□□□ 1.03
HMG20B-209ENST00000470356 CMTM2Q8TAZ6 248 aa21.47■■□□□ 1.03
HMG20B-209ENST00000470356 SPXQ9BT56 116 aa21.47■■□□□ 1.03
HMG20B-209ENST00000470356 KRTAP4-5Q9BYR2 181 aa21.47■■□□□ 1.03
HMG20B-209ENST00000470356 A0A1W2PPV4 95 aa21.46■■□□□ 1.03
HMG20B-209ENST00000470356 NXPH4O95158 308 aa21.46■■□□□ 1.03
HMG20B-209ENST00000470356 TMEM183BQ1AE95 376 aa21.46■■□□□ 1.03
HMG20B-209ENST00000470356 FAM74A1Q5RGS3 127 aa21.46■■□□□ 1.03
HMG20B-209ENST00000470356 IQCF2Q8IXL9 164 aa21.46■■□□□ 1.03
HMG20B-209ENST00000470356 TMEM183AQ8IXX5 376 aa21.46■■□□□ 1.03
HMG20B-209ENST00000470356 ARL6IP6Q8N6S5 226 aa21.46■■□□□ 1.03
HMG20B-209ENST00000470356 RASL10AQ92737 203 aa21.46■■□□□ 1.03
HMG20B-209ENST00000470356 ABCA13Q86UQ4 5058 aa21.46■■□□□ 1.03
HMG20B-209ENST00000470356 TRGV11A0A075B6L2 103 aa21.45■■□□□ 1.02
HMG20B-209ENST00000470356 LINC00315P59091 139 aa21.45■■□□□ 1.02
HMG20B-209ENST00000470356 TDRG1Q3Y452 100 aa21.44■■□□□ 1.02
HMG20B-209ENST00000470356 LYPD5Q6UWN5 251 aa21.44■■□□□ 1.02
HMG20B-209ENST00000470356 TRGV4A0A0C4DH28 118 aa21.43■■□□□ 1.02
HMG20B-209ENST00000470356 NEGR1Q7Z3B1 354 aa21.43■■□□□ 1.02
HMG20B-209ENST00000470356 OR10G4Q8NGN3 311 aa21.43■■□□□ 1.02
HMG20B-209ENST00000470356 RAB2AP61019 212 aa21.42■■□□□ 1.02
HMG20B-209ENST00000470356 RPH3ALQ9UNE2 315 aa21.42■■□□□ 1.02
HMG20B-209ENST00000470356 SFTA3P0C7M3 94 aa21.41■■□□□ 1.02
HMG20B-209ENST00000470356 KRTAP10-2P60368 255 aa21.41■■□□□ 1.02
HMG20B-209ENST00000470356 Q6ZRN7 208 aaPredicted RBP21.41■■□□□ 1.02
HMG20B-209ENST00000470356 GOLT1AQ6ZVE7 132 aa21.41■■□□□ 1.02
HMG20B-209ENST00000470356 ZNF479Q96JC4 524 aa21.41■■□□□ 1.02
HMG20B-209ENST00000470356 OR10G9Q8NGN4 311 aa21.4■■□□□ 1.02
HMG20B-209ENST00000470356 OR10G7Q8NGN6 311 aa21.4■■□□□ 1.02
HMG20B-209ENST00000470356 NAGKQ9UJ70 344 aa21.4■■□□□ 1.02
HMG20B-209ENST00000470356 TVP23CQ96ET8 276 aa21.38■■□□□ 1.01
HMG20B-209ENST00000470356 ALG5Q9Y673 324 aa21.38■■□□□ 1.01
HMG20B-209ENST00000470356 TRAV21A0A0B4J279 112 aa21.37■■□□□ 1.01
HMG20B-209ENST00000470356 K7EQD1 137 aa21.37■■□□□ 1.01
HMG20B-209ENST00000470356 HMGB3O15347 200 aaKnown RBP21.37■■□□□ 1.01
HMG20B-209ENST00000470356 TREM1Q9NP99 234 aa21.37■■□□□ 1.01
HMG20B-209ENST00000470356 TRAV8-1A0A0A6YYK1 113 aa21.36■■□□□ 1.01
HMG20B-209ENST00000470356 IGHV3-16A0A0C4DH30 117 aa21.36■■□□□ 1.01
HMG20B-209ENST00000470356 GNRH2O43555 120 aa21.36■■□□□ 1.01
HMG20B-209ENST00000470356 SRIP30626 198 aa21.36■■□□□ 1.01
HMG20B-209ENST00000470356 MAPKAPK5-AS1Q8N8E1 139 aa21.36■■□□□ 1.01
HMG20B-209ENST00000470356 TRAV4A0A0B4J268 109 aa21.35■■□□□ 1.01
HMG20B-209ENST00000470356 M0R2P5 195 aa21.35■■□□□ 1.01
HMG20B-209ENST00000470356 ORM1P02763 201 aa21.35■■□□□ 1.01
HMG20B-209ENST00000470356 ARL14EPLP0DKL9 152 aa21.35■■□□□ 1.01
HMG20B-209ENST00000470356 OR2G3Q8NGZ4 309 aa21.35■■□□□ 1.01
HMG20B-209ENST00000470356 PCNPQ8WW12 178 aaKnown RBP21.35■■□□□ 1.01
HMG20B-209ENST00000470356 GYPEP15421 78 aa21.34■■□□□ 1.01
HMG20B-209ENST00000470356 GNG5P63218 68 aa21.34■■□□□ 1.01
HMG20B-209ENST00000470356 F6UZH7 168 aa21.33■■□□□ 1.01
HMG20B-209ENST00000470356 STAG3L2P0CL84 134 aa21.33■■□□□ 1.01
HMG20B-209ENST00000470356 STAG3L3P0CL85 134 aa21.33■■□□□ 1.01
HMG20B-209ENST00000470356 CDC34P49427 236 aaPredicted RBP21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms